Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0088700 |
| Transcript ID | LotjaGi5g1v0088700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptidylprolyl isomerase; TAIR: AT3G10060.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein; Swiss-Prot: sp|Q9SR70|FK164_ARATH Peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic; TrEMBL-Plants: tr|I3S072|I3S072_LOTJA Peptidylprolyl isomerase; Found in the gene: LotjaGi5g1v0088700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:15168326..15174540) extracted from Lotus japonicus Gifu genome v1.2.
GGGGTATTTATAATTGCGTATGTTAGATATTTTGTGTGTAAATGAAGTGAGTGTGTGAATAATCATATCATCTTTTCATT TCAGAATCTGTAATCTCTAACTGGTTCAAAATTGTGGATGCAATCAACCGCACGTTATCCTCTCCTTATTTTCTTTCTTT TTCCTCTCAACCAAAACTAGACTAAATCTATAATAATAAATAAACTAGACTCTGGTCTCACATTAATAGTCAACAACATC ATGGAACTCTCTCTGATCCGTCCTCCTATGCTTCTTCATTGCCCCCTCAACTCCATTCTCTTCTCAACAAGTAACTCCTC TTAATTTACTCTTCTTCTCTATTATATATGTTCTTGTTGCTTTCATCCAAGCTATGCTAAGGCATTTCACATTTCACTTA CTCCACAGGGACACACAACAAAACATCATACAGGTTACCATGCCGCTGCTCATGTTCTTCCTCTAATAAAACTGCTGCAG AACCAGTTACAGAGTCTTTACAGATTGAAGGAAGAAGAGAATTACTCAGTTGTCTCATCACAACTGGTTGGTTTTCTATC TTTTATTATTCTCTTCATACATGCCATTCAATGTGACTTGGTTGAATGTTTTGTCTTGTGTCAGTTGCTGGAGTCTTTGC ATGTGATGTGGCTGGAGCTGTTAGCACAAGTAGAAGAGCTGTATGTTACCCCATTATGTTATTTGAGAAAATAAGAAAGG ATGAATTTGAAAAAAATTAAGTACTAATTGGAATTGTGCACTTTTTTGGTCTCTGAAGCTACGAGGAGCAAAAATTCCTG AAAGTGATTTCACAACCTTGCCCAATGGTCTGAAGTAAGTGTAAATCACCTCTCAAATCCCTTTAATTGTGGATCCTTCT AACTTCGGCTATAGCATCAGATTCAGATGACTAATGACTTAGTTAGTGAGTGTTCGGATTAGCGCCCATCAAAATTGATT TTAGTAAACTGATTACAGTAAAAGTAAAAGTGAGTTTAAAGTAAAGTGATTTATGAAAAGGTAACTTTTGTTGGGTAATA TTGTGAAATTCTGTTGTAAAATCCCACAACTGATTATGTTCAACTCAGAAGCTACTCTTCTAGCTTCTATTAGAATTGAT TAGGGGTCTGAAACCAATTATGCAAAATGACTCTCAAACATCAATATTTTTATCCATAGTTGATTTTACACTATTTGAAT CGATTATGGAGTTTCCCAATGGAAACCAAGCACACTGCTTGATGATTAGAAGTGTGTTAAAACCCCTTGAAATAGATATA ACCATTAGAGAAATTCCCCCACATATAAGATGTATATAAGTTTTATTCAGCTCAGAGAAACAGACTCTGGTACTTTGGTT TGATTGGCTGCATTTGATAGACTAATCTTTAGTTTTTTTTTCAATGTTTGATTTTGAAACTTCCACACTATTTTTTTAGT TGATTTCATTTTTGAGATGTGTATAGCTAGTTGGGGCCAGTTTGTGATGAAACTCTGATATCTCCAGGTACTATGATTTG AAAGTTGGGAATGGAGCTGAGGCTGTAAAAGGATCGCGTGTCGCAGTACGGTTGTAATGCAGTTAATTATGTTTCACTCT TCAGTTCTTCTGCATCATATAGAGTTTACTCAGAAGAGCTCCTAGATATGTCAATATGATACACATAGTACACCTTTAAA AATTTGTTTCTATAGAGAGCCTTCCTGAACACTTTCGAGTCATAAACTATATGGTGGGATTACAGATTACCATTTAGTTT GGTCTTCAATACCGACTCAATTCTAGAATTATTTGAAGGGGAAACTGTAAAGTTGCTCAGTGGCCAAAGCTTGTCAATGT TTTCAACTTCACCAGTAAACCTGATGGATGCATATTAAATTATATTCTGAACACTGAAATTTACATAACATGGATTTCAA TTTCATATCTACTTAAATTTTGGACAAAAGAAGACCACAAAAACTGAAGCGGTGAGAATGATCAAAAGATAAACGATCAG ATGCCTGAAATTGTTGATGATTGACTTTTTCTATTGCTAGCATTTGTTAACCTTCAGTCTCTATAATTACATGAGCCAAT GACTAGATAATACTCTCAGGTGTCTCACAGTTATTAAGAAAATGATATTTTGTTGAATACTTTATAAGGATTCATTTAAT TGTGAAAAGAATTCCAATATAGCACCTGATTGATTCTAGCAGAATATTAATGTGTTTCTGTTCTGGTGCTGATAGGTTGA TATGTGCATCCATGTATACTAATCTTATGAGTTTCTCCTTCCCCTCTCCCCCTCCCCTTCCCCCCTTCATTTGCAAAAGC AATTTATTAGTGTTTATATGTTACTGATCTTATGAGCTTCTCCTTCCCCTCCCCCCCTCATTTGCAAGTGCAATTTATTA GTGTTTATATGTTACTCATAATTTAGAAATAATCAGATTATCATATTTTAGGTTCATTATGTTGCTAAGTGGAGAGGTAT CACCTTTATGACCAGTAGACAAGGAATGGGCGTTGGAGGAGGAACGGTATAGTCCAAGTAACTCTCCCAAAATCTACTTA TCCACTAATTGATAGTTCTAAGTGAACAGGTTTTTCCTTGTATAAACAAGGTAGTTCCTCATGTACAAAACTCTTACAGC AAATATTTCCATATTTATGTGAAGTATGTTGACTAGTAGACCAACTTGATAAGATAAAAAAAACTCAATCTCGAATCACC TTATGGTATCTCTCCCTTTGACCAGGATACATCACAATTTTTTAACTTAGTCCAATTATAGCTTTGGTTAAAAAATGAAG GAACATGTGTTACTACTTATTAGCTGTGTAACTGAAATCTATCCCCTCTCATTCAACATCCCATCACATTGTTTTCTAGG ACTATGAGTGCATTTGTTTCAGGTAAAAAAAAAATGATTTTTAACTACCTAAAAAAAGATATTTTTTTTAGAGATCTTAT AGAAAAGCATAAGCTGATATGCACTCAGACATGTGGAAATATCAATGTGTGCTGTCCACTTGGTTTCCTGACAAGATGAA TTCTGATTCCATGTCCATGATGATATCTAGACGGCCATAATGTATAAATCTATGATACTTTTTTTGTTGTAAAATTTGAG TGTTGATTAATTGGAACATTTGTGAAATTACTGCAGCCGTATGGATTTGATGTAGGCGAATCTGAGAGAGGAAATGTCCT CAAAGGGTTGGATTTAGGAGTGCAGGGCATGCGAGTAGGAGGCCAGGTAAAAGCAGATTCTACAAGCTGGTCTCTTTGTT TTGTTACAAATTTCATCCTAATCTGGACAATCAGTAAAACTAAGTGTGTGAATCCTTTTTTTCAATTTGATCTGAGAAGC TTATCAGCCACTACTCAGAAAACTACAGAGCAACACATTGAAATTGAAACTACTTTAAATTTCTACCCTTTATGATCATA TAATTATTCAAGCATTTTATATATTTAGCCATTTAGACTATGAAGTTTTTTTTGTTGCACAACTAGACCTAAAAGAAGTT GGAAGGGGTTCTGACATCTCACTAAGTTATCTTAGCACACTATGAGCCCATTTGGATACGGTCTTACTGAAGCTTATCTA CTAGAAAAAGCATTAAATAAGCTTCAATAAGTACTCTTTGGTTTGCATCCAACACAGGTTCTATCTGGGATAACATTTTT GTAATAAGTGGCTGTAAATCGGTTACATTTTGGGTTGGATCATAGGTTTCATTCAGTGTAATTTAGTTGGTTTTCTGCAG CGATTGTTAATTGTTCCTCCTGAACTTGCGTACGGAAAGAAGGGAGTCCAAGAAATACCTCCAAATGCAACAATAGAGGT GAATTATTCTGATCTCTTTGTTATGACTTGTTTAGGCTATTAGATGCTAAAATTAACACTTTAGCTCCATATCACATGAT GTACTTCTGCATCTACATAAACCAAATATTGTTCTAGGTTGAATTATTAAATTTCTGACTCCCTCTATAACCACCATTGC TCTAACTGATCAGATACATTTGGCAAATAGACATCAGTAAAAAGGAGAATCAATCCATGGTCTAAAGACTTAATTTGATT TTAAGGATGAAAAATGCTTGTTTTGGGTTTTCATTGGTCAATAAAATTTGTGAAGATCCCAAATGTTGTGATGATATGTG AAATACCTAATCTAAACGCCCTTGATCTACTACATTTCAATTTATAGCAATACTGATTTCAACCTATTATTGCGGATTGC AGGTAGATATTGAACTGCTTTCCATCAAACAAAGTCCATTTGGGTAAGTAATGGTTCCATAAAATTTCTATGTTACAATA TTAGGGACTCCTTTAGACTGCAAATTTCAATGATTTTGTGTTGTGCAGGACTGCGGTAAAGATCGTCGAAGGTTGATGAT ACAAGTGCTAACTTGGCAAATCATGAGAAACAAGACCGTCCTTATTTCACCGTTGTGAAAGAACCTGGATTTTAACCTGG ACTTCCAAATAAGAAACAGGGAAAAAGTTTGAACTCAAAAATTTGATTATATGTATCCAATTCAGGGCTTGTGTAGCTGT GTTTGCTAGAAATCAGAAAGTTCATTAAAGGTGGACGCCAAATATATAAACCAAAATGAAGGGCGGAAGAATGAACAAAA AATAACAAAGGAAAGAATGAAAACTGTACAAGTTTTTATCTTGTCTCATACTCTCATTCAATGTCATATGTACTATCAGT AGTGCAAAAATCAAATTTAAGTAAAACTTGGAATTTGCCTCCAAATATTTAAAAAAAAAATCTGAATTGGCTGCAAAGAA TAGTTGGCTGCATAGGATCCAAAGGATAAGACAACATTTATACAGATGAACAAAACTCTCTTCAATTATTAAGCTGATAG CCAACCACATCCTTTAAAACTCAGAAACCTATTCCTACAGACTAAATGTTTTCATATCTAATAAACATGCACATTTCTAA GAATCATGGAAATTTCTATGCTTTCATGACCTTCATCTCAAAATTGTCTTCTGATGGAGCAGGCTTTGATGAAATTGCTT CCTGATTCCGTCTCTGCTGCTCTTCATTTACAGCATCAGGTTTCCACGCCTATGAATGTACCTTCACGGTTGAGTTAGTC CATATTATATACACACATGAACAAGATCATCACTAAAATCCATGTTTAAGAAGATTACCAGTAGAGCTCTGTCTTCTTCA TTTCATCATTATAACTTCCTCTATAGCTTCAGGTGCAGATTTGACTACACAAAAAAAAATATCATCATAATTTTGCGATT TAAGAAGCCTATAAAAGTGTCTATTTATTTATCACAAACAACTAAGACAAAAAAAAAGCTTTCACAATGGAGTCCATCTA AATCAATAACACGCATTGGAGTGAACTTGATCTTTGCTAATTTATCTGACTGAGCTTTCTTGCCATCTAATGGTACAATG CCAGATCGTTCTAAAGATGGCACCAAAGCTCCAGTCAGAGAAATTAGCATAAACGGATATGGTTGAAGATTAGAAGAAGA ATATGGTGGTGTGATGGGTATTTGAAGAAAGAAAGGAAAGCATTGGTGCTGTGTGGTTAGGCTTAACAGGTTGCAGTGGG TGAAGGTATGCCCCCTTCCCCTATAAGCTATCCCTCTTTTGTCTATTACGCATCCTCTTTGCAACGGAGTGTGTGTGAGA TTGGTTTTTCTGTTCTTTGCTTGTGTGTGTGTGATTGCTTTATTTGTTATTGGCTTGTGTGATTGCTTTTTTGTTCTTGG CTTGTGTGTATGATTGCCCTTTTGTGCTTTGCTTGTGTGTGAGATTTCTATTTTTGTGTGTGGTGCATATAGGGATGTCA GGTAGGGTCGGAGATAGTATTATAGTATTCATTTTCATACTTACATTTTAGAACGTAATCATACTCATTTTCATATTTGC GTGGATAACGACTTGAATGTTTGTCCTCATATTCTATAGGCTCGTACTCATACTTATTATCAGCAATTTAGTTACCCAAA ATATAATAGCTCGTTTGATATGCTTATTAGGTCTGATAGTATAAACTTATACAATACAAATTAAAATATAAGGGTTCTCG TTTGCCAAACTTTCCCTTTAACACTAAGTATATCGACCTTGCGATAGCTTCAGTCGCTCCCTCCCAATTTCATTAGGAAC TGGGAAGAATTATCCATGCAATTCATTCATCACTTTATCACTAGCAAAGGCTCAC
CDS sequence (LotjaGi5g1v0088700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACTCTCTCTGATCCGTCCTCCTATGCTTCTTCATTGCCCCCTCAACTCCATTCTCTTCTCAACAAGGACACACAA CAAAACATCATACAGGTTACCATGCCGCTGCTCATGTTCTTCCTCTAATAAAACTGCTGCAGAACCAGTTACAGAGTCTT TACAGATTGAAGGAAGAAGAGAATTACTCAGTTGTCTCATCACAACTGTTGCTGGAGTCTTTGCATGTGATGTGGCTGGA GCTGTTAGCACAAGTAGAAGAGCTCTACGAGGAGCAAAAATTCCTGAAAGTGATTTCACAACCTTGCCCAATGGTCTGAA GTACTATGATTTGAAAGTTGGGAATGGAGCTGAGGCTGTAAAAGGATCGCGTGTCGCAGTTCATTATGTTGCTAAGTGGA GAGGTATCACCTTTATGACCAGTAGACAAGGAATGGGCGTTGGAGGAGGAACGCCGTATGGATTTGATGTAGGCGAATCT GAGAGAGGAAATGTCCTCAAAGGGTTGGATTTAGGAGTGCAGGGCATGCGAGTAGGAGGCCAGCGATTGTTAATTGTTCC TCCTGAACTTGCGTACGGAAAGAAGGGAGTCCAAGAAATACCTCCAAATGCAACAATAGAGGTAGATATTGAACTGCTTT CCATCAAACAAAGTCCATTTGGGACTGCGGTAAAGATCGTCGAAGGTTGA
Protein sequence (LotjaGi5g1v0088700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MELSLIRPPMLLHCPLNSILFSTRTHNKTSYRLPCRCSCSSSNKTAAEPVTESLQIEGRRELLSCLITTVAGVFACDVAG AVSTSRRALRGAKIPESDFTTLPNGLKYYDLKVGNGAEAVKGSRVAVHYVAKWRGITFMTSRQGMGVGGGTPYGFDVGES ERGNVLKGLDLGVQGMRVGGQRLLIVPPELAYGKKGVQEIPPNATIEVDIELLSIKQSPFGTAVKIVEG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 23 | 229 | 207 | 9.4E-97 | – | |
| PANTHER | 23 | 229 | 207 | 9.4E-97 | – | |
| Gene3D | 81 | 222 | 142 | 2.7E-36 | – | |
| SUPERFAMILY | 94 | 216 | 123 | 5.7E-32 | – | |
| Pfam | 118 | 213 | 96 | 1.6E-24 | ||
| ProSiteProfiles | 122 | 216 | 95 | 22.924 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). |
Expression pattern of LotjaGi5g1v0088700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…