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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0090300 |
| Transcript ID | LotjaGi5g1v0090300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant/T32M21-140 protein; TAIR: AT5G04550.1 type-1 restriction enzyme mjaxp r protein (DUF668); Swiss-Prot: sp|A8ICS9|CFA46_CHLRE Cilia- and flagella-associated protein 46; TrEMBL-Plants: tr|I3S8U1|I3S8U1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0090300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:15689970..15693135) extracted from Lotus japonicus Gifu genome v1.2.
GTTCGAACCTTCCGTATGAGACAAAATCCCTAATAAACGCATACTAAAATTTAAAAATCTCAATGATTACAAGCCTTCAC TAAACTCCAAAAACTCAAGCAGCTAGCTCTAATGCAAACTGAAGAGTTATACAATGCATTGCAGACTGCAGTAGTAGAAT CTTTGGCACCAAAACGCAAGCGGAGACACGATTCTGAACGAGCAATTACCAAACTCTATCGTTCCATGAACTGTCACAGT AGCAACCGAGTTTCCAAAAAGCATAAACCCAACCTCGGTTTGACCGAATATTTGTTCTGTCTCTTTGTCCCTTTTACTAT GTGTCTCAATATGTCTTTGCCATTTGGGTCTTTGTCACTTTCCTTACCCTCTTTTTCCATATCACCCGCAACCATTGCTT ATGCTTTTGGCTGCTTTGCTTCTGCGCACAGTTGAGGATTTTCTTCATCCAGAGCTTATTTTCTTCTACCTCAGCTTAAT GCCACTTCAGATTTGTGAAGGGTATGTTTCTAATCACTCTCTCTATATTTGTGTTTGTGTGTTTTTTATTTTTTAATATT AGTGGTTTTGATTCGTTTGTTTAGTGAGAAATTCTGGATGCATGATAAATTGACAGCAAAGGGTGAACAAAAAAATTCAA ACTTTGAAAAGGGGTTTTAGTATCCTTGAAGTTCCAAAATTGCTTTTTGTTGGGTTGGGATTTTTCTTCAATGTTGAAGT CTTTCTTTGTAATAATACTGCAATTTCAATCTTGCACTGTACAAGCTCCATGTCAAGTTTGAAATTATGTGCTGATACCC TGTTGGTGGCCTTAAGGGTTTTTGAGTTTCTGATCTTTGTATTTGTGTTTGATGATGTACACACAGGATAGTGGCAGCTG TTGAGATTGTTAATTAGGCTAAATTTGATATATATCAATGAAGGGTGACGCGGTGAGTGGGACATGGCTCAGTGGTTTAT GGCCAGTCTCCAGCAAGAGTGCTTCAGATGACAAGGAAGCAATTGGAATTTTGGCATTTGAAGTTGCTGGCTTGATGTAT AAGGTGGTTAGTTTATGGCATTCTTTGAGTGACAGGGAGGTGATGAGTCTGAGGGAATGGATAGCAAACTCGGTTGGGGT TAAAATGCTGGTGTCGGACGATGATTGTTTCTTGATGGAGCTTGCATTGAATGAGATACTCGATGAGTTTGAATCTCTTG CAAGGTCTGTGGCCAGGTTGGGTAAGAGGTGCAAGAATCCATTGTATCATGGTTATGAAAATTTTGTCCGCAACCCGTTT GAAAATTATCCTCAATGGGCTGGATGGGAATACAGATGGAAAAAGATGGAGAGGAAGGTGAAGAAAATGGAAAGATTTGC GGCTGCCATGTCACAGTTGTCACAAGAGCTTGAGGTGCTAGCAGAGCGCGATCAAACTTTCAGGAGAATGAAGGCGAATC CTGAGTCGAAACAGGCAAAATTGCTTGAGTTTCAGAAGAGGGTCATGTGGCAGCGCCAGCAAGTGAACAATCTGAGAGAC ATGTCTCCTTGGAATAGAAGTTATGACTATATTGTTCGATTGCTAGCGAGGTCATTGTTTACAATTCTCGAGAGAATCAC ACTTGTGTTTGGAATTGGAAACAGTCATGTTCCAATTGAAAAGCAACAATATGATTCACCTTTTATGAATTCTAATAGCC ATCATTCACGCAACCATTCATTACCTGCTCTCATGCTTTCGTCTGTTCATCCTTCTGAGACTAATCCTAATCCATATGGA TCATGTTCAGAACTTGTTGGGAGCAAGCCACTGTTGAGCTCAGAGAAGAGCAAAAGAAAGAAGAAAGAGATGCAATTGAC TCATACACAAAGTGTTAAGCACCTGCATTCAGAAAACAAGCATTTGAAGCATTCTGGGTCCTTTAAAGGGTGCATGCCAA CTAATGGTGGTTCCATGAGGTTGATTGATTGTCAAGTGAAAAATATCAATGACATGAAAACAGTGGATAAGTTCTCTCTT AGAGTGCACTTTAAACTATCCCTCAAGGGTCGGTTAAGGCCAGGTACATCTACCCTTGGTGATGCTGCTTTAGCTCTTCA TTATGCAAATGTGATTGTGTTGATAGAGAAGATAGTTTCAGCACCTCATCCTATTGATCTTCAAATCAGAGATGATCTTT ACAATATGTTACCAACCACTATAAGAACCGCTCTGAGGACTAAGCTTAAATGGTACGCGAAAAGCAAAGTTCATGATGCT AGCCTTGCAGCAGAATGGAGTGTAGTGCTCTCACAGATATTGGAATGGTTGGCTCCATTGGCACACAACATGGTAAGGTG GCATTGTGAGAGGAATTTTGAGAAGGAGCATGATACTTTGAAAGCCAGTGTTTTGCTTGTCCAGACTCTTTACTTTGCGA GCCAACCGAAAACTGAAGCTGCAATGGTTGAGCTGCTTGTTGGTCTGCAGTATGTATGGAGGATTGATAGAGAAGCTAGC ATGAGAGATGCATCGGATTTTGCAGGCTCTAGATCCTTTAAACGTGTTCGTTAAAAAGGAATGAGTTCCTGTTTGGATTG GCGTTTGCCTTGACGCAACCATTAAAACTCACATCCCAACACATCAGCAGAGAAGCAAAATTTTATCACGTTGACTCAAA CATGGATCCGTGTTGTGTTCAGCGCCAAACTAAAAGGGCATCGAGCTGAGAAATGAATGTTTATAGACTATATGACATTG CCATTGTGCCAGGGCTAAATGTCATCTGTGATGTACAGTTCTCATTTTCAAATGGGAGGCCTTTACAAATAGTAACTTAA TACTTTTGATATTAATACACTGGTACAAAGCTTAGTTTCATTTCGGTCAATCAATTTTGTTTTAAAGCAAAAATAATAGT TGTCTAAGCGAATTTGGAATGTAGTGGAAAATGGTTTAGTTTATTTTAATGAAAAAGCACTAATAAATGTTGATTCACAC TCCTATCACACTGGTTTTCCAAAAAAAAAAAAACTCCTATCACACTCAAGCCAAGTGAAAGATATGAAAGATAGAAAGAA AGAGCGAGAAATGAGAGATATGGTATGCGAAGTGATAGAAAAAGAAGAGAGAATTAGTAAAAGAAAAAAAAGTAAAAATA AGATGGAAGATAGGAAGAAAGAGCGAGAAATGAGAGATATGGTATG
CDS sequence (LotjaGi5g1v0090300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGGTGACGCGGTGAGTGGGACATGGCTCAGTGGTTTATGGCCAGTCTCCAGCAAGAGTGCTTCAGATGACAAGGA AGCAATTGGAATTTTGGCATTTGAAGTTGCTGGCTTGATGTATAAGGTGGTTAGTTTATGGCATTCTTTGAGTGACAGGG AGGTGATGAGTCTGAGGGAATGGATAGCAAACTCGGTTGGGGTTAAAATGCTGGTGTCGGACGATGATTGTTTCTTGATG GAGCTTGCATTGAATGAGATACTCGATGAGTTTGAATCTCTTGCAAGGTCTGTGGCCAGGTTGGGTAAGAGGTGCAAGAA TCCATTGTATCATGGTTATGAAAATTTTGTCCGCAACCCGTTTGAAAATTATCCTCAATGGGCTGGATGGGAATACAGAT GGAAAAAGATGGAGAGGAAGGTGAAGAAAATGGAAAGATTTGCGGCTGCCATGTCACAGTTGTCACAAGAGCTTGAGGTG CTAGCAGAGCGCGATCAAACTTTCAGGAGAATGAAGGCGAATCCTGAGTCGAAACAGGCAAAATTGCTTGAGTTTCAGAA GAGGGTCATGTGGCAGCGCCAGCAAGTGAACAATCTGAGAGACATGTCTCCTTGGAATAGAAGTTATGACTATATTGTTC GATTGCTAGCGAGGTCATTGTTTACAATTCTCGAGAGAATCACACTTGTGTTTGGAATTGGAAACAGTCATGTTCCAATT GAAAAGCAACAATATGATTCACCTTTTATGAATTCTAATAGCCATCATTCACGCAACCATTCATTACCTGCTCTCATGCT TTCGTCTGTTCATCCTTCTGAGACTAATCCTAATCCATATGGATCATGTTCAGAACTTGTTGGGAGCAAGCCACTGTTGA GCTCAGAGAAGAGCAAAAGAAAGAAGAAAGAGATGCAATTGACTCATACACAAAGTGTTAAGCACCTGCATTCAGAAAAC AAGCATTTGAAGCATTCTGGGTCCTTTAAAGGGTGCATGCCAACTAATGGTGGTTCCATGAGGTTGATTGATTGTCAAGT GAAAAATATCAATGACATGAAAACAGTGGATAAGTTCTCTCTTAGAGTGCACTTTAAACTATCCCTCAAGGGTCGGTTAA GGCCAGGTACATCTACCCTTGGTGATGCTGCTTTAGCTCTTCATTATGCAAATGTGATTGTGTTGATAGAGAAGATAGTT TCAGCACCTCATCCTATTGATCTTCAAATCAGAGATGATCTTTACAATATGTTACCAACCACTATAAGAACCGCTCTGAG GACTAAGCTTAAATGGTACGCGAAAAGCAAAGTTCATGATGCTAGCCTTGCAGCAGAATGGAGTGTAGTGCTCTCACAGA TATTGGAATGGTTGGCTCCATTGGCACACAACATGGTAAGGTGGCATTGTGAGAGGAATTTTGAGAAGGAGCATGATACT TTGAAAGCCAGTGTTTTGCTTGTCCAGACTCTTTACTTTGCGAGCCAACCGAAAACTGAAGCTGCAATGGTTGAGCTGCT TGTTGGTCTGCAGTATGTATGGAGGATTGATAGAGAAGCTAGCATGAGAGATGCATCGGATTTTGCAGGCTCTAGATCCT TTAAACGTGTTCGTTAA
Protein sequence (LotjaGi5g1v0090300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKGDAVSGTWLSGLWPVSSKSASDDKEAIGILAFEVAGLMYKVVSLWHSLSDREVMSLREWIANSVGVKMLVSDDDCFLM ELALNEILDEFESLARSVARLGKRCKNPLYHGYENFVRNPFENYPQWAGWEYRWKKMERKVKKMERFAAAMSQLSQELEV LAERDQTFRRMKANPESKQAKLLEFQKRVMWQRQQVNNLRDMSPWNRSYDYIVRLLARSLFTILERITLVFGIGNSHVPI EKQQYDSPFMNSNSHHSRNHSLPALMLSSVHPSETNPNPYGSCSELVGSKPLLSSEKSKRKKKEMQLTHTQSVKHLHSEN KHLKHSGSFKGCMPTNGGSMRLIDCQVKNINDMKTVDKFSLRVHFKLSLKGRLRPGTSTLGDAALALHYANVIVLIEKIV SAPHPIDLQIRDDLYNMLPTTIRTALRTKLKWYAKSKVHDASLAAEWSVVLSQILEWLAPLAHNMVRWHCERNFEKEHDT LKASVLLVQTLYFASQPKTEAAMVELLVGLQYVWRIDREASMRDASDFAGSRSFKRVR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 537 | 533 | 6.3E-220 | – | |
| PANTHER | 5 | 537 | 533 | 6.3E-220 | – | |
| Pfam | 31 | 87 | 57 | 1.0E-24 | ||
| Coils | 137 | 164 | 28 | - | – | |
| MobiDBLite | 294 | 326 | 33 | - | – | |
| MobiDBLite | 294 | 328 | 35 | - | – | |
| Pfam | 379 | 467 | 89 | 2.0E-32 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0090300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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