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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0095800 |
| Transcript ID | LotjaGi5g1v0095800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | F-box family protein; TAIR: AT1G57790.1 F-box family protein; Swiss-Prot: sp|Q9FVS1|FBK23_ARATH F-box/kelch-repeat protein At1g57790; TrEMBL-Plants: tr|K7M001|K7M001_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0095800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:16976466..16982630) extracted from Lotus japonicus Gifu genome v1.2.
CCAGTGCCTTCTTTCATTCTTCTCTGTGTGTTGACACCCTTCTCACCTCTTCCTCTCTCTCTCATCAATCCCTCTCTCTC TAGAAACCAACTTCGCTGTTCCGCATAATGTCGGGGAAAAAGAGGAGGAAGTTGAAATCGTAAGTTCCTGTTCTGTCTAA GTCTAATCCAACTCTGAATTTTACTTGTCCTTTTTCTAATTTGTTCAATTTTTCGTATGAATTTTGTGAAAATTGTTTTC AAATGCTGGATCTTTGATAGGACTAGTGTTTTTTTGTTTGGTCTGTGACTGGATTTGAATAATGGACTAGGTTTATGATA GTGACTGCTCTAGGGTTTATGGATCATTTCAAACTCTGATGCATTGTTTTTTATTTTAAGATTGTGATGTCTGCTTTGTT TAATTTTCATTTTTATGATCTAATGTTGTGTTTGATTTTAGTCCTGTGGTATAATTTTTCTTAATTTCAGTTTGTGTTTG GAATCACATTTGTAATACTGAAAAGTGGATTTACCTGGTTTGAACTTGATTCTACCCACACAAGCACATTCTGTGATGGA AAATTGATTCTGATTTCAGAGTTGAATTTGGAATTTATCTGCTTCTAGCAGTAGCTTTCACTTTTTATGCGAATTGGTTG TGTGAACTGAAAAATTTTATGGTAGAAATGAATTTTTTTTCCGAAATGTATCCTGACTGAGGTTTTAGGTTGTGGTTGCA TCGCGAGCCTTGATGTTGTGATGTGGTCGTGTAGACCTTCAAAATCATGATGTTGTGGCTGATCTAAAACCTTGATCCAA ACATAAATAACTTTGGGTTTAACTCACTTTTACCGAATTCAATTCCATTCGAAATCAATTTTGATGGACTCATTCAGTCA CCCACTTGAAAATAATTAATAGTAATACTTCTATGCTTTTTCTAGTGTTTAACACTCTTTTGATTATAATTCTCACTATA CTAGTTTTGGTTTGCTCATGTAGAGTTGTAAACCCAGATAGTCAATTTTCAAAGTATTCGTACTGATGATGGTATTATTA TGTTATATACTTCTCGTGATATAGATTATCTTATTTATGGTTTACTGTCCTTGAGTGGTATAAGAAGTGAGATTGGTGTA CATATTTATTGGGATAAAGACCTGTTCAATTCACAAAGTTCTAGTCTCTTCCTTTTGCTGTTGCATCTTAAGTGTATTCA AGTGAATTTGTTCAACTTCTCTCTTACATATATCTCCAATTATTCAGGTTAAGTGATGCAATTGCTGACAGCAGAAGATC AGGAACAGAGGTTAAAAATGAAAATTTGGAGCTGCAATCATGGTCTGATCTCCCTGCTGAACTCTTAGAGTTAGTCATGA CCCGCTTAGCCCTAGATGATAATGTCCGTGCTTCTGTTGTTTGCAAGAGGTGGCATTCTGTTGCCACTGCTGTGCGTGTG GTAAACCAATCGCCGTGGCTAATGTATTTTCCAAAATATGGTGACTTGTATGAATTCTATGATCCTGTGCAGCGTAAGAC CTATTCACTTCAGATGCCAGAGTTGAGTGGATCAAGAGTTTGTTATACAAAAGATGGTTGGTTACTTCTTTACCGTCCCC GAACTCACCGAGTTTTCTTCTTTAATCCCTTTACTCGGGATATTATCAAACTGCCAAGATTTGAGATGACATACCAGATA GTTGCCTTCTCTTGTGCTCCAACGTCACCTAACTGTGTTCTGTTTACTGTTAAGCATGTTAGTCCTACTGTTGTGGCTAT TAGCACATGTTACCCGGGGGCAACAGAATGGACCACCGTTAATTTCCAAAACCGCTTGCCTTTTGTCAGTAGCATATGGA ATAAGCTTGTCTTTTGCAATGGACACTTTTATTGTCTGAGTCTCACAGGTTGGTTAGGCGTGTTTGACCCATCTGAACGT ACTTGGAGTGTTCTGTCAGTACCTCCACCCAAGTGCCCAGAGAACTTTTTTGCCAAAAATTGGTGGAAGGGGAAATTTAT GACAGAACATGAGGGAGATGTTATAGTAATATACACATGTTCTAGTGAAAACCCCATTATTTTTAAGTTAGATCAGACAT TAATGGAATGGGAAGAGATGAGGACACTAGATGGAGCAACTCTTTTTGCTAGTTTCTTATCTTCTCATTCAAGGACTGAG CTCCCTGGAATGATGAGGAACAGTGTCTACTTCTCTAAAGTTCGTTTTTACGGGAAGCGCTGCATATCATTCTCCCTTGA TGACTTTCGATACTATCCTCGTAAGCAGTGGCATGACTGGGGAGAACAAGACCCTTATGAAAACATATGGGTTGAACCAC CAAAGGACTTCCCTGGTTTCACCTGAAGAATTTTGGTGAAACAAATAAGCATTTCCAAACCAGTAATGTGTAGAGGTATT TGTTATCACTCAGTTTCTAACTTTATTTATAACTGTTGGATACATGTTGTCATATTGATGCATAATAAGCTAGTCTGTGA TTATTCTTTACGAAGTAATTATTTATATTTGAACTTTTAATCATCATTATTGATGCTTTTAATATTGGATTAACAATGTT TGCTATGTGCAAAGTAGTCAAGGATGCTCTCATTCAGGCATATTCTTATCAATGCTTAGTTATAGGGTTAAATTTTGTTA AATTTTTGTGTACACTACAAGCTAACTATTCATTCACATCACATTAAAGTAGTTTGACTATGCCCATAGCTATCTAAAGA GTTTTCTATTGATGTGTCAACACATGACTAAATAAAAACTTGACAGTGAATCAAAATCAAACTCAGAAGTTCTGTATAAT TCTTGGAGAACTTTTTCCTAAATGTTTACATGTGTTAATACTTCATAATAACTTCAGTGTCAGTTTTGGACATAAATATA AATGATGCTTTGCATTTGCTGCACGTTTTCGTCAAAAAGCTTTTGTTATTTCTCTTCAATATTTTTAAAATGGTATGGTT ACTGACTTACTGTCATTGTTTTAAAAATGGCCATTGTCATTATTGAGTTTGAAAAAGGAAGGGGTTGGATGTTAAACTGT GAAGCATTACTGTCTGTGTGTTTGTGTATTATAGACATAGATACAAACAAGTTTGAAATCTCTATTTTATTTTGACTTGT GAGGATGAGAAGAGTGAATCTAGGTTAAACATTAAGTCATGCATGTGTGTGTTGGGATTTATGATCTAGAGTCTAGACAC ACATGACAGAGAGTTATGGTATTCCATGATCCATGTATCTGGCCCCACATCTTGTTGTTGTTGGACAAGTTCATTCGTTC GCATTGAGCAGGAAGCTTTCACAAAATTTCTGCCTAATATTCCATTTAATGTATAAAATTGAGATAATCCTATTAAGGAT AGTAAACTTTGTTAAGTGACTTCCTTTGTATGGAAGGGTAGAAGGTAATGAAAAAGAATAATTATTTAGATAAAATTGGA TTTTGAAAGAGACAAATTATGAAATTGAATCCCAATGAGAAAGGACTACAAAGACACAAGTCAGGGGAACTTTTGAGGGC ATTTAGAAAAAAAATTGACAGTGACCAGGGAAGATGAAGACTAAAGGGCATACCAGCTTAGAAAACCATAAGTAACTGCA GCATTTTCTCTTATTCTTGCACTCTTCACTGATGCCCAAATTTTACAAACATACGCCAGCAATCCTGAAAATTTATCTTC CCTACTTAGTGAATTTTGTTTATGCCAAATCTTGCTGAACCTATGTGATTGATAAATGTTTATTTAGCTGTTTGTCGAAG ATGATTTGTTCACTGTGATAATTTTGTGATTTGGTTTGTTTGTTTTGTGACTGAACTGGTTGGCCCACTAAAATATTGAG CATATACACACCATTTTTAAAATTTGGATAGGAATATCAATCCTAAACTCCATGTTAGAATGCCGCATTTCATACCGACT GTCTTGATGCATTAATGTGATTCTTAATGTAGAGCGTAAATTTTTCCATTCTGCAGTTTTGGAGTTGTAGCTATCACTCT TTGGGCAGTAGCAGTTCGTTAGTAAAGTTCATTCTCAGAAGCATGCCAAAGGCGGCATCTCTACAGACTGTATATAGGAG GCTATATGTGTGAAGGAATCAGATCTGTTGGGGTAAGCTAAAGACTTACCCCCTTAATTATGTTGTCTCTGCTGAACTAG AAATTTCAATAATTTTATCAGTACAATAGATGTAGTGCTTATGCAAAACAACTGGGATTCATACTAGGTTTACCTAAATA TTTATTGACATTTATTTTGGGCGTATGATCTATAGATATATTATCTGGATTGTTATTCATATTTCGTTGTGTGGTTGGCC TCTGCTAATTCAATTTTAGCTTCCTTTACTAAGGGAAATTTGTTTAAATGGATTGTCGTCCTCGATGACAGTGTGCGCTA CATGCTACCACGCAATTCAGAGTCCAAGCAATCGATATTTTACCATCAAGGATATAGTGGTTTTTGTAGTAGCATTTGTC TGTATTCTGCACATGCATTAGTAATGTCTTGAGCTTTTGTAATATTTGCCGATAAAATGTCAGTGAGTCGTGAAGTCTTG AATTTACACTACATACAACACAGTTTTCCATCTACAAGCATAAAATTGGATTATGAAAAACTTTCATATTCCTCATATTA AACTGGTACATTTTCATGTGATCGATTATATTTAGAAATAAATGACATTCTCAAGGAAGTTTCTGGTAGATTTTCTTTAA TACATAAGACTATTAATAATAGATTAAGAATTTGGATGACCGATACAAGGAACCTTATTGCCTTTAAGGATTTATGTTTT CTTCGTAGAAGATGAGTCCAACTTGCTCCATCCAAATTCCCTCAAATTCAGCTAGTTTGCGTTAACATAAGTTACCATCT CACGATCAGGGATTGTAACTTCGCAATGCTGTGTGGCGGACACTAATACCTCATGCTGAGATGGTTTCTTTTATGGAATG GTTAATGCAACTTGCAGAGTTTGAAATTATTAAATGGTTAATGCAACTTGCTTTGGATTCAATTTGGAGGTGTTGAAGTG CTAAGATACTTAACAATGCAATTCCAAATCTGAATGCCTCACCCTTGTGCTCCCTGACTGCCCAGATTCATCTTTTTATT GTTGGCTTCTCGCATGTGATTTGGGGCATGTTTTTCGGGAGGCTGATGCGCTTGCTAAATTTGGTGATTCGGACATATCT TCGCGTGTTCTTGATGTGCTTCTTAGTTTCTGTTTTGTTCAGTTTTTGTAAGGCAGTGCTTCTACTTTTTACCTGTGGAG CCTTGTAGTTTGTTTTGCTTTGTTCCCTTGGTTGTTTCTAGTGCCCATGCTTCACTGAAAATAAAGTTTACATGAACTCG TATTGACAATATAGTACTTTTGGTCAAGCAACATAGAATGCAATTTCATTTTTTTGTTATATTTTCAGTTGATCCCCACA GACGGCGCCAATGTTCTGGATCTAGATCTGACATGAAGAAGGGACCTTAATCCAAAACCCTAGTAGACAAAGTTATGAGA AAATAAGAGTGTAATATAATAATGGAAAGATTTTTTTTACACTGAATGACCTTCCATTTTATAGTGGGATGGTCCAATAT CCTAATGCTATATTAATTGGGCCCCTGGGCCTCAAAAATCCTCGGTCCAGAGAGTTGGTCGCCCTATGGAGGTCTCGCCT AACCGTCCTATAGTCGAGCCAAGGTCTAACTCTGAGCGGGTCCTATCATGAGCAGGCCCCGCCTAGTCCAATAGGGATAG AGGCGCAAGAAAGCAAAACAAACTATCCTCTAGGTAGACTGTGGGAGAACATTTTTCGTTTAATCTTTTTTTTGTCGATT GTTTATCTAAATAAATCGTGTTCATACTAAGATATTGGTATTTATCTCTTCAATTTAGCTGAAAAGTCTAAAATTAGTAA TGCTTAGAGAAGTACCACTAGCTGTGCTTAAATCAAACATCCCTTCTCCATTTCTAAACATTGTTTCACAATAAAATATT ATAATGACCAAGAAGATGAATGTACTGTCAACTAAAAGAGGGTATAATGTAGATGAACTTGGCCAAACGTACCTGTATTT CATCCATACTTTAGGCAGGCGCAAAGATCATTGTTGAAAGGATCTAGCTCTCATGCCATTCTCAAAGGCAGCAAGCAAAT AATGG
CDS sequence (LotjaGi5g1v0095800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGGGGAAAAAGAGGAGGAAGTTGAAATCGTTAAGTGATGCAATTGCTGACAGCAGAAGATCAGGAACAGAGGTTAA AAATGAAAATTTGGAGCTGCAATCATGGTCTGATCTCCCTGCTGAACTCTTAGAGTTAGTCATGACCCGCTTAGCCCTAG ATGATAATGTCCGTGCTTCTGTTGTTTGCAAGAGGTGGCATTCTGTTGCCACTGCTGTGCGTGTGGTAAACCAATCGCCG TGGCTAATGTATTTTCCAAAATATGGTGACTTGTATGAATTCTATGATCCTGTGCAGCGTAAGACCTATTCACTTCAGAT GCCAGAGTTGAGTGGATCAAGAGTTTGTTATACAAAAGATGGTTGGTTACTTCTTTACCGTCCCCGAACTCACCGAGTTT TCTTCTTTAATCCCTTTACTCGGGATATTATCAAACTGCCAAGATTTGAGATGACATACCAGATAGTTGCCTTCTCTTGT GCTCCAACGTCACCTAACTGTGTTCTGTTTACTGTTAAGCATGTTAGTCCTACTGTTGTGGCTATTAGCACATGTTACCC GGGGGCAACAGAATGGACCACCGTTAATTTCCAAAACCGCTTGCCTTTTGTCAGTAGCATATGGAATAAGCTTGTCTTTT GCAATGGACACTTTTATTGTCTGAGTCTCACAGGTTGGTTAGGCGTGTTTGACCCATCTGAACGTACTTGGAGTGTTCTG TCAGTACCTCCACCCAAGTGCCCAGAGAACTTTTTTGCCAAAAATTGGTGGAAGGGGAAATTTATGACAGAACATGAGGG AGATGTTATAGTAATATACACATGTTCTAGTGAAAACCCCATTATTTTTAAGTTAGATCAGACATTAATGGAATGGGAAG AGATGAGGACACTAGATGGAGCAACTCTTTTTGCTAGTTTCTTATCTTCTCATTCAAGGACTGAGCTCCCTGGAATGATG AGGAACAGTGTCTACTTCTCTAAAGTTCGTTTTTACGGGAAGCGCTGCATATCATTCTCCCTTGATGACTTTCGATACTA TCCTCGTAAGCAGTGGCATGACTGGGGAGAACAAGACCCTTATGAAAACATATGGGTTGAACCACCAAAGGACTTCCCTG GTTTCACCTGA
Protein sequence (LotjaGi5g1v0095800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSGKKRRKLKSLSDAIADSRRSGTEVKNENLELQSWSDLPAELLELVMTRLALDDNVRASVVCKRWHSVATAVRVVNQSP WLMYFPKYGDLYEFYDPVQRKTYSLQMPELSGSRVCYTKDGWLLLYRPRTHRVFFFNPFTRDIIKLPRFEMTYQIVAFSC APTSPNCVLFTVKHVSPTVVAISTCYPGATEWTTVNFQNRLPFVSSIWNKLVFCNGHFYCLSLTGWLGVFDPSERTWSVL SVPPPKCPENFFAKNWWKGKFMTEHEGDVIVIYTCSSENPIIFKLDQTLMEWEEMRTLDGATLFASFLSSHSRTELPGMM RNSVYFSKVRFYGKRCISFSLDDFRYYPRKQWHDWGEQDPYENIWVEPPKDFPGFT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 376 | 376 | 6.5E-250 | – | |
| PANTHER | 1 | 376 | 376 | 6.5E-250 | – | |
| SUPERFAMILY | 30 | 102 | 73 | 1.11E-10 | ||
| ProSiteProfiles | 33 | 84 | 52 | 9.709 | ||
| Gene3D | 35 | 74 | 40 | 3.1E-10 | – | |
| Pfam | 35 | 74 | 40 | 3.7E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0095800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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