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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0102600 |
| Transcript ID | LotjaGi5g1v0102600.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transcription factor; TAIR: AT2G36010.1 E2F transcription factor 3; Swiss-Prot: sp|Q9FNY0|E2FA_ARATH Transcription factor E2FA; TrEMBL-Plants: tr|A0A0B2P0M7|A0A0B2P0M7_GLYSO Transcription factor E2FA; Found in the gene: LotjaGi5g1v0102600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:18569485..18574331) extracted from Lotus japonicus Gifu genome v1.2.
CGAAACAAATTCCCTCCTTCCCTCGTTTTCTACTCCTGCCTCCACACCCTAAACTCCCTCATTTCCTGCAACCTTTTTTC CTCTCTCTCTCTCTCTCTCTCTCTCTCTCCACCACTCTCTCTCTCTAAAACCCTAGTCCTCTCCGATCGTTCCACCCCAA TTCGGATTTCAACCACCGTCTTCCCCCGCCACTCAATGTCCAGCACCGCTGGAGCTTCTGACAATCGCGCCACGCCACCG CTCCAACCTCCCAACCGCCCACCACTCAAACGCCACCTGGCCTTTGCTTCCACCAAGCCGCCATTTGCTCCGCCCGATGA TTACCACACCTTTTCCGCCGCCGCCACGACCGCCGCTGGTCCCGATTCTAGGAGAGGCGCCCATCACGAGCCTGAAGCTG TCGTTGTCAGATCTCCGGTGAGTCCTTCTGCTCTGTCTTACTCTGTTGGTGAATAATTGGGTCGTGCTTGTGTTTGGGTA TTCCGAATCTGAAATGATTCTTTTGTGTTTTTTTTTGGTTAGGTTTTGTTTTGTTTAATTCTCTTAATTTTTTTCTTTGA ATTAGTTGGACTCAGCTTGATATGTTTTTTGATTTTTTGGTTAATTTGAAGCAAATTGTTGATTGCGTTGTTTTTAGTTG TTTTTTATTACTTTCATGATGAGAAGACTAGTTTGTTTCACAATCCTGGATCCAGACTCGAGTATAGTGTAGAGGGGGGA ATTTAGCATCTGCGTTTCGGGTTTATTTTGAAGTAATAGTTGACGATGCGGCAGAGCTAGGGCTTAATTGCAAGACAGTG TGACTTCCTGGTGGGATAAAATGATTTTGTAGGGTGTGTTCATCTGCTGGACTGATTGCCGCTGAAACTGCGAATTCTTG TGCAATTTTAAGTCTTAGTGGCTTATGAACTTCATTTGTGGTTTAGTACGATGAGATTGAGTTGCTCCTGAACTTTTTTC ATTTGTGGCGTAATGTGTCCCCCCCTTCCTGTTGGAGAGCTTAGGATCATTATGAGTTATGACTTATTGTATGTATAAAA GGATAAAATTATAACTCTTGCTTGGTTGGTTGCATTTGGTCACTTTCGTGTGTCTGTATATCTTTGCTCATCTCTTGTCT CTTGCTAATCTTATTATTAATGGAACCTGATGGTGGTGCCAGTTCATAAAGCGGAAGAATGGAATGAATAACAATGAAGG AGACTCACAAAAGTGGGGTAATAGCCCTGGAGGCACTAACGTCATGAATAGTCCTTTTAAAACTCCTGTGTCTGCAAAAG GGGGAAGGACACATAAGTCAAAAGTTTCCAAAGAAGGCAGATCATGTCCTCCAACACCCATCTCAAATGCTGGCAAGAAT TCCCCCCCTTATTTTTCCTGTTGAACTAAGTTTACGATTCAATTGAGAATTTTTTAGTGCTTCAAAGCAACTTATATGCT CAATGTGTTTTGCTTCTTCCTTGCTGTACTCCAGCCATAATATTGTGTTTGATCAGACAGTATTTGTTGACATGCAGGTT CCCCTTCTCCTCTTACTCCTGCTAACAATCGTTATGACAGTTCCTTAGGTAATATTGGAAGATGTTTTAATCAACAAGCC CCTTACATTTCATTCCCTAATAGGGTATGTCGAATGTAGTTATTTCCAAGTGAAAAAAATGACAATTGTACAGGAACTTC ACAGGTCTTTTGACAAGAAAGTTTATCAATTTGATCAAGCATGCAGAGGATGGAATGCTTGACCTAAATAAAGCAGCAGA AACATTGGAGGTCCATTTTTTCGTTTAAAAATTACAATCAGAGTACCTGATATTTATTCTTTCTGTATCATATATAAATT TATGTTTTCCTCTTGTATAGGTGCAAAAAAGGAGGATATATGACATAACTAATGTTTTGGAAGGGATTGGTCTCATCGAA AAGAAGCTCAAGAACAGAATACATTGGAAGTAATATGTGGTGCATATTTTTTTTATAAATTGGGTTAAATTTGTTTTTTG TCTTATATAATATGATATTTTTGTTTTTTAGTCCCTATTTAAATTTTGTTTATTTTTAGTCTTTACTTTAACTAAATTGT TTGTTTATAATCCCTTACCCGGGACTAAATAAAAGTATGACTTTTATGTTTTTTGAGAGCTAAATAAATAAAAATTGAAT GAAGACTAATTATAAAAATTATCATATTTTCGCAGATCAAAAACATATTTAACCCTTTGTAATTCCTTTTTATAGAAATG TAGCTTTTCTTTTGTTTAGCTAAAGTTTAGATGTATGCATAAGAGCATAGTTCTTATATCTGACCCTGTGGAATGTAGGG GAATTGAATCTTCTACGCCTGGTGCGGTTGATGGTGATATCTCTATGCTAAAGGTAAATGATGTGGATGCTGTTTTCTGT GAGGGACCTATTGACAATGTGACCCAAGGAACTAGCTTATCAGTGTCATTTCCATGGCTCATGTATCTTTGATTCCATCC ATAATGTTTGTAGCAGCACTCAGGCATTTACTGGTTCAGGACCTTTGTTGGTCAAGTTCTATATTTATCATTGTTAATTA TATAAAAATTTTAAGAGATTAGAATGACTTAGTATGGCTTAGTGTTGCATATTGTTAATTGGGCTGTTTGCCGCGTGGCT TTGACTTAGTATTTGTAGTATGTTATAGCGTATTGTATTGTTAATTATGCCGTTGGACTTTTGGCTGTCTTGCAGGCAGA AACTGAAAAACTTTCTTCGGAAGAGCAGAGATTGGATGATCAGATAAGGTAAAGGTTGCTTTGCAATTGGAAAAGCAGAA ATTCCTAGTTTTTTAACTGTTGGCTTAATGCTGATCCTTCTAAAATATTGACAGGGAAATGCAAGAAAAGCTTAGGAGTT TGAGTGAAAATGAAAACAACCAGAAGTAGACTTTTCCAAATTCAGTTTTTAGATTCATTTTTACTTTGCCCTCCCTTTCA TAAGAAAAAATAAACGTGTCATTAAGCAATAAGCCTTATAATGATTTTTCAATTCTTGTTAGGTGCCTTTTTGTGACTGA AGAAGATATTAAAGCCGTTCCTTGCTTCCAGGTGTTTTTTCTTTCCTTTTTATGCATTCCACTCCCACATTATATATTAT TATTATGAATATTGCTGTGTTCTCCTTCCATGCTGATAATATTTGAGGTTTTCTTTTATTAATACTAGTGTGTTCCTTCG AGCAGAATGAAACTCTGATAGCAATCAAAGCTCCTCATGGAACTACACTGGAAGTCCCTGATCCTGAGGAAGTAAGTTTA GGGCGTAATTTGCTGAAAGGTTCATGATCTTTTTAAAACTGGTGTTTCTGATGCATGATGGAGAATTATTGCTTCTGTAT GCATCAGGCTGTTGACTATCCACAGCGAAGATATAGAATCATTCTTAGAAGCACGATGGGTCCCATTGATGTCTACCTTA TCAGGTATAACTGCCACTTCTTTTACTATTATTGTTTCCTTTTATGTTAACCATCACTCCATATAGAAATCACACTTTTA CTCTGTATTTCATATCATTTGTTTAATAGTTTGCTGGAGTTGTATACTTTGTTGTAGTTTTCTAGTTAATCTATCTAATA ATAAATTTTCCATTAATCGTTGTAATTTCTGTACTGCCTCTAGTCAATTTGAAGAGAAATTTGAAGAGATTAATGGTGCT GAGCCCCCCATCAGTCTCCCACTTGCTTCAAGTTCAGGTTCCAATGAGCAGCTAGTGACAGAAACGGTTCCTACTGAATT CAGTGGAATAGGACTTGAGCCTCAAGCTCAGCTCTCTTCTCAAGGGTACTCTGATCTGAATGCTTCACAAGAGTTTGCTG GTGGCATGATGAAGATTGTCCCTTCAGATGCTGATGTAAGTATATTGTAGTAATGATTGTAAGTTCTATTGGCCAAGTTG GCTTATGGTCCTTTAGTTGTTTTCTCATAATTAGCATTAAGTGCTTGGGATAACAGTCATTCTTTGATGTAATGCATTGG CACTTACTGATATTTTTGTAATTTTTGTAGAATGATTCAGATTATTGGCTTTTATCAGATGCTGAAGTTAGCATAACAGA TATGTGGAAAACAGATGGTATGCTTTTCAATTTTTTTTGTGCCTTTATATTATCCTTTCTACCTTTTCTTCTCCTGCCTT ATGTCTTCTTTGTAGTAGTTCATCTAATTCCTTAACTCCAACCAAACAGCTAGTGTTGACTGGAATGGAGTGGACATGCT TCATCCTGACTTTGGCTTGGTTTCGAGGCCGCAAACTCCATCATCTGGGTTTGCTGAAGCACCACCCACAGCAGCTAACT CTAATCAGAGGTGATTCTGATTTGTCTATTAGTGGTATATCAGAAAATATGGTTTGCCTATCATCCATTGCACAGAGGGA AACTGCTTCAATAGAGTAATTGCTAGCTTTGTGAATGTTGAGGATGCTGTCAGGAGCTGTGTAAATGTCAAGCAGGGAGT TTTTGCTGCACTAAATCATTGACTCTGTTATGAATAAACTAGTTATGATGGACATAATATGCTCATGGAGGATTTAGGTT GGAAGGTAGGGAAGCAGGGACAAGTTTTATTCAGAAAATGTTGCTACTGTATGATTGGAAAGCAGGCTCCATAATCAACA TATGGTCATATTATTAGCCATAATTGAAGTCTGTGGCATCGTCGGTTCAATGTTTTTGAAGATGAGAGAAGCTATGTAGA TGCTGTGACTTCAAACAATCTACAAGGGTGGACTGGATATTGTTAGGAGATGAACACCTTATTATTAAATTATCATTCAT GCATTGTAAACATTTGATAAATATTATGCGAGTAAAATTATGTCAAT
CDS sequence (LotjaGi5g1v0102600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAAGAAAAGCTTAGGAGTTTGAGTGAAAATGAAAACAACCAGAAGTGCCTTTTTGTGACTGAAGAAGATATTAAAGC CGTTCCTTGCTTCCAGAATGAAACTCTGATAGCAATCAAAGCTCCTCATGGAACTACACTGGAAGTCCCTGATCCTGAGG AAGCTGTTGACTATCCACAGCGAAGATATAGAATCATTCTTAGAAGCACGATGGGTCCCATTGATGTCTACCTTATCAGT CAATTTGAAGAGAAATTTGAAGAGATTAATGGTGCTGAGCCCCCCATCAGTCTCCCACTTGCTTCAAGTTCAGGTTCCAA TGAGCAGCTAGTGACAGAAACGGTTCCTACTGAATTCAGTGGAATAGGACTTGAGCCTCAAGCTCAGCTCTCTTCTCAAG GGTACTCTGATCTGAATGCTTCACAAGAGTTTGCTGGTGGCATGATGAAGATTGTCCCTTCAGATGCTGATAATGATTCA GATTATTGGCTTTTATCAGATGCTGAAGTTAGCATAACAGATATGTGGAAAACAGATGCTAGTGTTGACTGGAATGGAGT GGACATGCTTCATCCTGACTTTGGCTTGGTTTCGAGGCCGCAAACTCCATCATCTGGGTTTGCTGAAGCACCACCCACAG CAGCTAACTCTAATCAGAGGTGA
Protein sequence (LotjaGi5g1v0102600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQEKLRSLSENENNQKCLFVTEEDIKAVPCFQNETLIAIKAPHGTTLEVPDPEEAVDYPQRRYRIILRSTMGPIDVYLIS QFEEKFEEINGAEPPISLPLASSSGSNEQLVTETVPTEFSGIGLEPQAQLSSQGYSDLNASQEFAGGMMKIVPSDADNDS DYWLLSDAEVSITDMWKTDASVDWNGVDMLHPDFGLVSRPQTPSSGFAEAPPTAANSNQR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 208 | 208 | 7.7E-126 | – | |
| PANTHER | 1 | 208 | 208 | 7.7E-126 | ||
| Pfam | 1 | 79 | 79 | 1.8E-26 | ||
| CDD | 1 | 81 | 81 | 3.97965E-39 | ||
| SUPERFAMILY | 1 | 81 | 81 | 2.62E-24 | ||
| MobiDBLite | 196 | 220 | 25 | - | – | |
| MobiDBLite | 198 | 220 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi5g1v0102600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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