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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0114600 |
| Transcript ID | LotjaGi5g1v0114600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | lipase (DUF620); TAIR: AT5G06610.1 lipase (DUF620); Swiss-Prot: sp|Q4A8J1|KAD_MYCH7 Adenylate kinase; TrEMBL-Plants: tr|K7K8X0|K7K8X0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0114600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:23378392..23381767) extracted from Lotus japonicus Gifu genome v1.2.
CGCATTCTTTTTTCTCAACTTTCTGAGTCACTTTTCCATCCTCTTCTGAAAATAATTTCTTTAGAATTGGACCGTCGGGG TCACATCATATTCAATCTTGCAGTTAATTCGGGATCAAGCCTTTTCCACTCCTTTCCCATCGTGCACTACACGCCCTGAT CTGCGAGTGCTTAACAACACCATTCCATAACAGCAGCATACCAATGTTCCTTTGAAGAGTGTCTTTCCAAGCATTTTCCT CTGTTGCATTCCCTGTCATTGTATCAACAAACTGCAGTTAAGATGGGTAGGCTAGCACCATTGTCAGAAGAACCAATAAA TGAAGAAAATGAAGGAAGCAACAACAACTCAAAAAAAGGTCTTCAATCATGGAAGAACTGGAACTGGATCAAGACCCACT TTTCCCTAGTCTTCAACAAGAAATCCAACCTCAAGATCCTCCTCAGTGTTCTGGGTTGTCCTCTCTTCCCTCTCCCTGTC CACCCCAAACTACCCCTCAATGAGGCAAGCCTTTAAATTTTGCTCCTCTATTTCTTTTCAGTAATGATGCATAGACTAAC GGAACACTTCAGAGTTCAGACACTCATCCGACATATACATTAACGGTGAGTTTTAACCTCAGCCAGCTAATGTGTATGTC GGAAGGGTGTGTGATAATTCTGTATATCCGCTAAGCTTTTCCGATTTCTTTTTACTTCCCATTTCTATAACTTTTTCTAA ATTCCAATGCACCATGCTGCAGAAATATGATGCTGTGTTTCTCTGATTGGAAACTCCATACTTCAGAAACATTCACATGA GAAATAATTTTTTGTTGTTTTAAGAATCAAGCTAGGTTTCTTTCCTTATCATATAATTGAAAAAATTGTCTTTCTTCATC AAAGTACCTATTGGCTTGATTAAAAAGATGGCTACTACTAAAAGTGCTCAACTTAACTGCCAATGTTACCATGTACTCTA AATGTAAAAGGAGAAAGTGGACGTTTTCCAATAATTTTTTTCTTCATTAGTTAAAATTGTTTGTTGCAGGTGTCATCGTC GGCACAGTATATCATACAACACTTCACGGCTGCAACAGGGTGCAGGAAGTTAGAGGGGATGGTGAAAAATGTGTTTATTA CAGGGAAAGTGGTAATGTTTGTGGTGGATGAGCATGGATCGGGTGGAACTGGTGGTGTTGTTAATGGGACTTCAGAGAAA GGTTGCTTTGTGATGTGGCAAATGGTTCCAGATAAGTGGCAGATTGAGATGGTTGTGGGTGGCCAAAAGGTTCTAGCTGG TAGCAATGGCTCTGTCGCTTGGCGCCACACCCCTTGGATCGGCGTTCATGCCGCGAAAGGTGGAGTGCGCCCCCTTCGTC GTGCTATGGAGGTAAATTCTTCTTTGAAAAATTAGTGACAATGAGATGGAAGAAAAAGTGATATGAATATATAAAAGTTG ATTCTTTTGTAGACTTGTAAAAATTATCATCACAAAATTAGTCCTTTAAAAAATTATAATGTCAATACATCAGTACATAA ACTTTTTTCACCAAATAAGTGTCAGAAATCTAAAATGTGAACACTAGAAAATGTAATGAAGTAGTTTTGGAAGACCACCT CAAGGGCTTGGTTTTCTTCTTCAAGATGTGTTGTTATTAGTACAGTTACTTTGGTTGGGGAAGCAGGGTGTACTTGGTGT TTGTTGGTATCTGTAAGCTGCTGTTTTAATTTCTTGATCTGTGTTTCAATTGGAAGGTAAACGTTGTTGTTAGGACATAA TGATGCTGACTACGAAAATATTATGTCACCCTCATCATTATAACAAAGTTGAAGTGTTTATAAGACCTAACCCTTTGCTC CTTGAATTTCTTAATGTGTCATAATGGTCTTTGAAATTGAACATCATTATTCTGAGAAAATAAAAATCCTATTGACACAG ATATGTCTTTGTTGGGAACTCGTAATCAAACAATTTTAATTTATCTACCAAAAAAAAAAATTAATTTGTTAAAATAGCCA TATCTTACAAATACAGATTTTAAATTAATATGAACTCATACTCAAATATCTTTAATTTGTCTAAGTAGTCATAAATGTTG GTCAACTACTGCTATTCTATTTGATGAATAGACTTTCACAATCACACATCCACATGCTACCAGCCAATGTAATGGATCAT TGTTTCCCACTAAAACCCATTCATTTGTTCGATCTAACCAGATTCCTCTGTTTCCTCCACATATATGAATTGCGCATCAA CCACCAAGTTGGCTTATTAATTTAAGACTCTTTAAATGAGAAATTCAAACTTGATGACTATAACCAAAGAGATCAATTAA TTTTTCACACAAAAAAAAACTTTTTAATGGAAAACTTTGCTGTTGACTTCTAGCCTTCTGGGTCTACAATGGAAAATGGA TTTTCGAATGCAGTCAGAAAATTCTACATTCACGCAATTTGAATCGTTCAATTAAAATCGGTCAACTTAAATTTTAAATT TATAGCTACCGTCAGATCATGATGAAATATATGAACCGATTGGATAATTCAAATTCATGACTGCATGAACACAGGGTATC TCTGACGGCAGAATACCCGAATTCCTCTACAATGGTATCTAAAATGGTATCTGTATGTATAGTTTGGCACTAAATTCTGA GATTTTGTTTATGTTCCTTAAAACAACATTATGGCTGTTCATTGTAGGGACTAGACCCTTTGGCAGTATCTTCTATATTC AGTGCAGCACAATACATGGGGGAGAAACAAATCTCAGGAACAGATTGCTTTGTGCTGAAACTCTCAGCTGATCAAAAGGA CCTTGTTGAACGTAGTGACAACACAGCAGAGATGATCAAACATGCTATATTCGGTTACTTCAGCCAAAGAAGTGGCCTTT TGGTGTACTTGGAGGACTCTTACCTGACCCGGATTCAAGCACCAGGGTCTCACCCCACATACTGGGAAACCACAATGTCA ACCAAAATTGAGGACTACAGAGCAGTGGATGGCATGATGATCGCGCATGCCGGCTCATCCACCGTGATGATCGCCAGATT CGGGGACAACCTCAAGGCCGGACGACCCGCCGTCACAAGGTTGGAAGAGTCATGGACCATTGATGATGTTGCATTCAATG TCCAAGGATTGTCCATGGATTGTTTCATACCACCTCAAGAGCTAAAGAAAGATTTTCCACAAGAACATCTAGATTGGAGA TCATCCTTGCATATATGATGTATGTGAAAAGTTTTAATTGTTTGGTGCTGCTAAGAAAGTATATGGTTGACGCTAATTTT TACTCAACATTGTATAATGTTTTGAAATCGTGTTACACTTAGTCTAACATATTCAAGCAGCTATTGATTATTGATATGAA ATTTAATTTTTCCGTT
CDS sequence (LotjaGi5g1v0114600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTAGGCTAGCACCATTGTCAGAAGAACCAATAAATGAAGAAAATGAAGGAAGCAACAACAACTCAAAAAAAGGTCT TCAATCATGGAAGAACTGGAACTGGATCAAGACCCACTTTTCCCTAGTCTTCAACAAGAAATCCAACCTCAAGATCCTCC TCAGTGTTCTGGGTTGTCCTCTCTTCCCTCTCCCTGTCCACCCCAAACTACCCCTCAATGAGGTGTCATCGTCGGCACAG TATATCATACAACACTTCACGGCTGCAACAGGGTGCAGGAAGTTAGAGGGGATGGTGAAAAATGTGTTTATTACAGGGAA AGTGGTAATGTTTGTGGTGGATGAGCATGGATCGGGTGGAACTGGTGGTGTTGTTAATGGGACTTCAGAGAAAGGTTGCT TTGTGATGTGGCAAATGGTTCCAGATAAGTGGCAGATTGAGATGGTTGTGGGTGGCCAAAAGGTTCTAGCTGGTAGCAAT GGCTCTGTCGCTTGGCGCCACACCCCTTGGATCGGCGTTCATGCCGCGAAAGGTGGAGTGCGCCCCCTTCGTCGTGCTAT GGAGGGACTAGACCCTTTGGCAGTATCTTCTATATTCAGTGCAGCACAATACATGGGGGAGAAACAAATCTCAGGAACAG ATTGCTTTGTGCTGAAACTCTCAGCTGATCAAAAGGACCTTGTTGAACGTAGTGACAACACAGCAGAGATGATCAAACAT GCTATATTCGGTTACTTCAGCCAAAGAAGTGGCCTTTTGGTGTACTTGGAGGACTCTTACCTGACCCGGATTCAAGCACC AGGGTCTCACCCCACATACTGGGAAACCACAATGTCAACCAAAATTGAGGACTACAGAGCAGTGGATGGCATGATGATCG CGCATGCCGGCTCATCCACCGTGATGATCGCCAGATTCGGGGACAACCTCAAGGCCGGACGACCCGCCGTCACAAGGTTG GAAGAGTCATGGACCATTGATGATGTTGCATTCAATGTCCAAGGATTGTCCATGGATTGTTTCATACCACCTCAAGAGCT AAAGAAAGATTTTCCACAAGAACATCTAGATTGGAGATCATCCTTGCATATATGA
Protein sequence (LotjaGi5g1v0114600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRLAPLSEEPINEENEGSNNNSKKGLQSWKNWNWIKTHFSLVFNKKSNLKILLSVLGCPLFPLPVHPKLPLNEVSSSAQ YIIQHFTAATGCRKLEGMVKNVFITGKVVMFVVDEHGSGGTGGVVNGTSEKGCFVMWQMVPDKWQIEMVVGGQKVLAGSN GSVAWRHTPWIGVHAAKGGVRPLRRAMEGLDPLAVSSIFSAAQYMGEKQISGTDCFVLKLSADQKDLVERSDNTAEMIKH AIFGYFSQRSGLLVYLEDSYLTRIQAPGSHPTYWETTMSTKIEDYRAVDGMMIAHAGSSTVMIARFGDNLKAGRPAVTRL EESWTIDDVAFNVQGLSMDCFIPPQELKKDFPQEHLDWRSSLHI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 351 | 351 | 6.2E-181 | – | |
| MobiDBLite | 1 | 25 | 25 | - | – | |
| PANTHER | 1 | 351 | 351 | 6.2E-181 | ||
| Pfam | 103 | 344 | 242 | 7.3E-107 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0114600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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