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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0121300 |
| Transcript ID | LotjaGi5g1v0121300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | HSP20-like chaperones superfamily protein; TAIR: AT2G37570.1 HSP20-like chaperones superfamily protein; Swiss-Prot: sp|Q60348|Y043_METJA Uncharacterized protein MJ0043; TrEMBL-Plants: tr|A0A0L9TXL8|A0A0L9TXL8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0121300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:25385574..25388265) extracted from Lotus japonicus Gifu genome v1.2.
CGGTGGTCCAGAAGCGTGGTTGTATCCAGTGCAGGTTTCAACCTATGACCCTGTCATTATAATGACACGCTCACCTACGT CTCTGCTTTCTCTCTCCACTGCTCTTTTCCTTCCCACAAAATTAGGGTTTCTTTTTCAATTCAATGTGAGAAAAGAAAAA GTAAAAATCATTCATCATATCAACATTCATAGAAAAATTGGGAAAAAACTGTGTGAGAAGCCATGGTTGTCGATGATATG ACCAAGTGCATCGTCGTCGGTTATGGGCGTTGCAGTTCTACTCGATTCTTCGATGCGTATCCCAAAAGGTAATAATCCTT GAAGATCTATCTATCTATCTATTTCCCTCTTTTTTAATGGATTTGATGGTTTTGATTCAGTGTTTTCCCCCTGATTTTGG AGGTTTTCTGGAGATACATGGACTAATAATAATAGGGTTGAATTTAATTCCCATTTAGCATTTTCGAAATCTCTTCCTAT CTCCCAGAGATTGAAGAGAATATATAGTTATCACTGTTACATAAATTCTGTTTATTTATTTATTTAAAAAAATAGAAAGA AAAAAAAATATTATCTTGCTAAGGTTGGATTTTTAGTCGGGTTGGTATTTATTTTTTCCTGTTTTTTTTTTTTCTTTCAT TGGTGTTTTATGGAATTTAATTGATAAATCTAGGGGTTTGATGGAGGGGAGATATAGTGGGGATTGATATGATGTTGAAG GTGTTTATAAGGTTGTTTTGTTGAATTGTTTTTGGGATATGGTAATATTGTACCGACCAGCAATAAAACTCATCATCAAC AAGATGAGGAGGTAGGACGGTGGTGGATCCTTGTCTTGCTTCATTGTCAATGGAGAATCATCACCCTTCAACGCTCTTGT CCATGGATTCAAGTGCATCTTCTCATGAGGAACTGGATTTGGAGATGAATCGCCAGATCATACTTTCGCGTCCCCCGGAT ATCAATTTGCCCCTGTCTGCAGAGCGCAGCCCACCACCACAGCCATGGAGTTCTGACCCTTGTGATATTTTGGATGTTGG CCTTGGCACTCAAGGGTATGTCACTGAGACTTTTCTCAATCTGCCCAAAGCTGGAAGGAAATGTGCGAAGCGGTTTGATA GCATATGGGGTGCTTGGTTTTTCTTCAGTTTTTACTTCAAGCCTTCTTTGAATGACAAATCTAAGGCCAAGATTGTTAGG GACGGCAACGGTGTTTCTGGGTTCGATAAATCTGACCTCAAGCTTGATGTTTTCATGGTTCAGCATGACATGGAAAACAT GTACATGTGGGTTTTCAAGGAAAGGCCTGAGAATGCCTTGGGTAAGATGCAGCTGAGGAGTTACATGAATGGGCATTCTC GCCAAGGGGAGCGACCGTTTCCGTTTAGTGTTGACAGGGGTTTTGTTCGATCCCACAGGATGCAGAGAAAGCATTACAGA GGGCTTTCAAACCCTCAGTGTGTGCATGGCATTGAGGTTGTTCCTTCACCCAATTTGATGGTTCTGGACGAGGACGATCG GAAAAGGTGGATGGAGCTCACTGGCCGAGATGTGAATTTCTCAATCCCACCTGAAGCAAGCGATTTCAGTTCATGGAGAA ATCTTCCCAACACTGACTTTGAGCTTGACAGACCACCTCATCCAATCAAGAACACTCCAAATTCACACCCAAAGAAGCTG CTCAATGGATCTGCACTTAATTTATCAACTCATCTGTCTAACCACAGTAATGGCGATGTGCTGGACATATCTCCTATCAA CGGCAAAAAGAGGAAGGACTTTTTTCCTCATGGAAACGACGTAGAATGTTACCTGGTTGTTAATTCTCCACCTGATCGGA TTCAAGATGTAGAAATGCACTCGAGTGAGCTGCCACACTGGTTGAATGACTTCAGCGGGGTGATGAAGAATGTCTGTGGA CCTGTTACAGCTGCTAAAACTATTTATGAGGATGAACAAGGTTACTTGGTTATCATCAGTCTGCCCTTTGTAGATCTTGC AAGTGTGAAAGTTTCGTGGAGGAACACTCTGACTCATGGTATCATAAAGGTTTCTTGTATGAGCACATCTCGGAAGCCTT TGATGAAGAGACGTGACAGGACATTCAAGCTTACAGATCCATCATCTGAGCACTGCCCTCCTGGAGAATTTGTCCGCGAA ATCTCTCTTACGACCCGAATTCCCGAAGACGCTAACATAGAAGCGTACTACGATGAGCCAGGATCTGTGCTTGAGATCAT GGTGCCAAAGCATCGCGTCGGTCCAGAGGAGCATGAAGTCCGCGTCTGCCTTCGTCCTCATCTAGCAGGGAATGATCTTA TGTTAACTTGAGATAGAAGAAGCACTTCTAGAAACTTGTTAGGATTCCAGTGTGGTGTGTTTATCATTGTTCTTCTAACT TTGTACCATACAGTGTTATTAGTAATACAAAATGTTGTCTCTAGCTATTTTAGCTCACTGATTGCGCCTGTTCTTTTTTT TGTTCTGGTGCATCTAAGCTTTTGAATGTAAGCATTCTTAATCTTGAATATTCAGTTCTTTATTACGATGATCTGCATAC ATAGGTATCTGAATTATTATGTCAGTGTAAATTATCTTGGCAAAGAGACGAAGTCAACACTCATTATCTGCTTATGAAGT GCCTGTTACCACTTACCAATAGAATAGCTTTTGTTCTTAACTTTTATTTTCC
CDS sequence (LotjaGi5g1v0121300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAATCATCACCCTTCAACGCTCTTGTCCATGGATTCAAGTGCATCTTCTCATGAGGAACTGGATTTGGAGATGAA TCGCCAGATCATACTTTCGCGTCCCCCGGATATCAATTTGCCCCTGTCTGCAGAGCGCAGCCCACCACCACAGCCATGGA GTTCTGACCCTTGTGATATTTTGGATGTTGGCCTTGGCACTCAAGGGTATGTCACTGAGACTTTTCTCAATCTGCCCAAA GCTGGAAGGAAATGTGCGAAGCGGTTTGATAGCATATGGGGTGCTTGGTTTTTCTTCAGTTTTTACTTCAAGCCTTCTTT GAATGACAAATCTAAGGCCAAGATTGTTAGGGACGGCAACGGTGTTTCTGGGTTCGATAAATCTGACCTCAAGCTTGATG TTTTCATGGTTCAGCATGACATGGAAAACATGTACATGTGGGTTTTCAAGGAAAGGCCTGAGAATGCCTTGGGTAAGATG CAGCTGAGGAGTTACATGAATGGGCATTCTCGCCAAGGGGAGCGACCGTTTCCGTTTAGTGTTGACAGGGGTTTTGTTCG ATCCCACAGGATGCAGAGAAAGCATTACAGAGGGCTTTCAAACCCTCAGTGTGTGCATGGCATTGAGGTTGTTCCTTCAC CCAATTTGATGGTTCTGGACGAGGACGATCGGAAAAGGTGGATGGAGCTCACTGGCCGAGATGTGAATTTCTCAATCCCA CCTGAAGCAAGCGATTTCAGTTCATGGAGAAATCTTCCCAACACTGACTTTGAGCTTGACAGACCACCTCATCCAATCAA GAACACTCCAAATTCACACCCAAAGAAGCTGCTCAATGGATCTGCACTTAATTTATCAACTCATCTGTCTAACCACAGTA ATGGCGATGTGCTGGACATATCTCCTATCAACGGCAAAAAGAGGAAGGACTTTTTTCCTCATGGAAACGACGTAGAATGT TACCTGGTTGTTAATTCTCCACCTGATCGGATTCAAGATGTAGAAATGCACTCGAGTGAGCTGCCACACTGGTTGAATGA CTTCAGCGGGGTGATGAAGAATGTCTGTGGACCTGTTACAGCTGCTAAAACTATTTATGAGGATGAACAAGGTTACTTGG TTATCATCAGTCTGCCCTTTGTAGATCTTGCAAGTGTGAAAGTTTCGTGGAGGAACACTCTGACTCATGGTATCATAAAG GTTTCTTGTATGAGCACATCTCGGAAGCCTTTGATGAAGAGACGTGACAGGACATTCAAGCTTACAGATCCATCATCTGA GCACTGCCCTCCTGGAGAATTTGTCCGCGAAATCTCTCTTACGACCCGAATTCCCGAAGACGCTAACATAGAAGCGTACT ACGATGAGCCAGGATCTGTGCTTGAGATCATGGTGCCAAAGCATCGCGTCGGTCCAGAGGAGCATGAAGTCCGCGTCTGC CTTCGTCCTCATCTAGCAGGGAATGATCTTATGTTAACTTGA
Protein sequence (LotjaGi5g1v0121300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENHHPSTLLSMDSSASSHEELDLEMNRQIILSRPPDINLPLSAERSPPPQPWSSDPCDILDVGLGTQGYVTETFLNLPK AGRKCAKRFDSIWGAWFFFSFYFKPSLNDKSKAKIVRDGNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKERPENALGKM QLRSYMNGHSRQGERPFPFSVDRGFVRSHRMQRKHYRGLSNPQCVHGIEVVPSPNLMVLDEDDRKRWMELTGRDVNFSIP PEASDFSSWRNLPNTDFELDRPPHPIKNTPNSHPKKLLNGSALNLSTHLSNHSNGDVLDISPINGKKRKDFFPHGNDVEC YLVVNSPPDRIQDVEMHSSELPHWLNDFSGVMKNVCGPVTAAKTIYEDEQGYLVIISLPFVDLASVKVSWRNTLTHGIIK VSCMSTSRKPLMKRRDRTFKLTDPSSEHCPPGEFVREISLTTRIPEDANIEAYYDEPGSVLEIMVPKHRVGPEEHEVRVC LRPHLAGNDLMLT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 493 | 493 | 2.9E-303 | – | |
| PANTHER | 1 | 493 | 493 | 2.9E-303 | – | |
| Gene3D | 329 | 479 | 151 | 1.1E-6 | ||
| CDD | 365 | 467 | 103 | 9.75174E-7 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0121300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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