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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0131300 |
| Transcript ID | LotjaGi5g1v0131300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methyltransferase-like protein 13; TAIR: AT5G04610.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q8N6R0|MET13_HUMAN Methyltransferase-like protein 13; TrEMBL-Plants: tr|A0A1J7HEG5|A0A1J7HEG5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0131300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:30290103..30294495) extracted from Lotus japonicus Gifu genome v1.2.
AGTTAATTGCAGGGGATTATAAATGAATTGTAACTGATTCTCTCTCTAATTCAATCTCAGTTTCTCTGTTTTCTCTCTTT CTCTCTTCTTCTTCTTATTCCCTAACACTCGAGCAGAGGTCAACCCACAACCATCGCAACCCAGGATTGATTCAGGTATG TTCCTTTTTGCTGTAAATGCATATGTTCTGCTAGATTTTCTTTCCTGTGTATCCACGATCTGGTTCGATCTGAAATCTGA ATAAAAGGATTTTGTTTGGCTTGCTTGGCACCCTTTTATCCTTAATTGCAAACTCAGTTTGAAACAAAAAGCGCATATTT CATCCTTTCATTTAGATTTGTAGTTGATTATGTGTGTATAATGATTTAGATTGGTGATTGATTGTGTATATGATGAAATG TCATCGTGCTCACACTCTATTTAGTTTTAAGATGTGAGCTATGTAGCGTGTTTAAAGTTTGCTTCGATTTGAGAATTTTA GTCTTGTTCATGATCTGGCAGATTAAATGCTTCAAGTCTTGAACTACTGGATTAATCCATATGTGCTTGTGATTGCAAAG ATGATTAATCCATCTGGAAATTTTCCTTCTATGCTCACTAACTGTTTGATGAAATGACAAGATCATTCTTTGCTAATTCT TTCTTGGTTGATAAACTGTGAACTTGTTCAGTCCTCTGCGTGTTAGTGTCTCCAATATATTCACTATTTCACTGTATGGA CTTCAAGTAATTGACGCCATCAGTGGAGTTTGCTTTACATTACTGCATATCCATCACCTTGCGGATTGAGTTTTGCTTGT TTTATTATTCTGAGTTTTTTGCAATAGGACCAAAAAGCAACAATGTAAAAGAAGAAGATATTCTGTTGTATTTTATGTAG GCATACAGCAGCTTAAAATAATAATAAGAAAAAGGTGATAGATGCAACAATGCAGCACCTTCAGTTTGAGGGGGCAAATG TTAAATATATACTATGTATGTGCAGTTGTGCACTTTTGCAGGTTACACCCTGTATAGTTTCAGTTAGTGTAGCCTTAGCG ATGTTTGGTTGTTCAGTGAGTTGAAGCACTTTTCAGGTTACACCCTATATTCACTATTGTTCAGTGATTGGTTCAGGTAG CTAGATGCTGAGCTGTAACCAACTCCTACAGAATAGCTCTGTCTTCAGCTTACTGCTGAACAAGAGAACAATCATTCACA CCCTCTCTCTAACTAACCTTCCCTTAATAGTCACTCCCATTCAACCATGCCTTCTGTATGCTATTAGCGACTAACTCCCT CTAGGCCCTCTCACTTCACCACTCTATTGTGTATTACTTACAAACCGCATGAGACCATTGGTTTTCCATCTTTCCTCCCG GGTCATGTTTCATATTCTATTTAGTAAAAGTTTATACCTTAATTTTCCCCTTAATTTCTGTTTTTTTCCCTAATGTGTCA ATCACTGCACTATTTTGCATTTTCAAAGTTTTGTGGGCTGATTTTGTTTTCCAACTTTGCTGGTTAACAATATTTGCATG ATACTCACTTTCTATTATGTACTTAATTCTCTATGCTCATTGGTTCCCTTGCCCCTCTAATCCCTTCTTTTCTGTTTATT TGTTCATATCTGTAGGACTATTGTTTTACTGACTCCAAGATATCAAAATCCAAGCTTAGGTGTTGTAATATAAGAGAAAT AATCCTAAAGTGTGCTGTGGCATTCGAGAAAGAAGTAGATAAAAAGCAATTGCCTTGGATGAGTTTACAACGATGACCCT TGATGCAGCAACCTTTGAAAGTTTAAGCCCTTCTCGTTTTATCTGCTTCACGGTACCCGATCCAACTTGTTCAGATTCAC TGCTCCGAGTTGCGGTGCTTGACTCACCAGTCCAACCCACTGGCTCACCCCAAGTTGGTGCTATGTTAGTTCCTGAAGGC CGTGAAACTGATTGGATCTTCTCCACTAAATTGGGTCATCTCCAACTTCTCTTCAGTTCTCCAGGAATATCCCGCTTGAT TTTGATAGGAAACCAATTGAAGGAGGGTGATTCTTCACCACATATTTATCACCGTCCATTAAAATTTTCATTGCATCAGC AAGGCTTTGAGGTGTGGTCAAAACCTCTTCTCCTTGCTTTGTCTCCCAGATCTTTGTTAAAAAATGGTATCCCTGAGATA CCCATTTTGAGTTATGTAGATAACTTGGTTTCTAGTGTAGTAATACATGAATGTGTCGGTCATCATGTTGGTGAAATGTT GGTTGAAGATGTCGAGATTGAAAGTGAAGGTGATGAGCATCATGGTTGTCTCAAAAGGGAATTTCGAAGGCGGTTGAGGT TCAAGAGGATGCCAAATTTGATTCAAACAGAAGTTCGCATAGTTGTTCCAGAGACAGATCATAGTTTGATGAGTGTATGT ATTGAAGATGCAAAGTTTATGCTTGATCTTCGGGTTTTGGTTCATCCTTACCTGGCATCTATGGTGGCTAGTCTTTCAGT GATCAGTGAATATATAGAGGGACGAATTCAAAATGAGTTTAGACCTAAAGCTTTATGCCTAGGGGTCGGAGGTGGTGCTT TGCTAACTTTTCTGGCTATTCAATTAGGTTTTGAGGTCATTGGTGTGGATAGTGATGCAGAGATTTTAAGGGTGGCAAGG AATTATTTTGGATTGGAAGGCAATGAATTTATCCATGTTGTCAATGGAGATGCTATTAAATTTATGAAGAAAGTCTCATA CCAGGGAAAACACAGTGAGAGATCTTTTGCTGATAGTGAGCTTAATGGTTTTAGCCACATGGTGGATGGTAAGGTCAAGC ATAAATTTGATGTTGTTATGGTTGATTTAGATTCAAGCGATATAAGAAATGGTACAAGTTCTCCACCATTTGAATTTGTT AGAAAGCAAGTTCTTATTGCTGCTAAATTAGTTCTTTCTGAATCTGGAATCATTGCAATTAATGTCATTACTCAAAGTAA GTCCTTCTATGATAGATTGGTAAAGCATTTTCAGGAAGTTTTCTGTGAGCTGTACAAGATAGATGTGGGGAATGATGAAA ATTTTGTTCTTGTTGCCACAGTATCACCTCAGGTGTTTACAGTTGGGGATTGCAGTAATTCTTTTCTTATGCGACTCAAA TTAGTTATTCCAGAAGCATACATAAGTTCCATTAGGAAATTGTAGGCTGTGTTTGAATAGTTGTGCAGCAAACGTGAACG TAGGTTGGACTCCATCCAACATTTGAGTTCTGTCCAAAATCATGCCTTAGGAAATCGGGAATCTGACATGGAACAGAACA GCATTCCAACAGAAGTGAACACAAATACAAACACACAAGTAATGTCTCACTTGTTGAGGCAAGTGCTCTTAAAGATCATT AACCTCCACTTTCTGCATTGTAAAACAAATTGAAGATGTGGCAGTAGTTTTGATACCATGCACCTAGAATCAGCTTCAAG ACAATTGAGCCAACAATGTAACTGCAGCCGTATCAAAGCTTTAAATTTTGCTCTATATCCATTTGTTTTATTATGGTAAA TATACCTTTTTCTTAATCACGCTCTCAACTTTGGTTAATTCGAAAGTTGTACTCAAACTGTAGCATTCCTTCTTCATAGT TGAGTGCCTTTTTTATATATCCTTTCAAATATGAGAGAATTTGCACATGAGAGGATTACAAACAATTATTAATTCCATAC TCAAAGTTCGTTTTCCTTTGTTTATTTGTTACTATATATGGTATAATAAATTTAACACTCAAATTCAGTGTTATTAAACT CGGCTCGAACCGGCCGGTTTGACCGGTTGGACCGGGAACCGAACCCTAGGCCGGTTCGAGCCGAGCATCGGATCGGCCAT GCAATCCACTCGGTCTGAATCGGATAGATTCGGCCGGTTCGGTCAAAAACCCGGTGACTCGGCCTTGTACCGGTTGGACC AGTGAGTTTGTAAAAAAAAAAATAGTGCTCAAAAGTCAAAACAACGTGGTGATGCAGAAAAGGGAGAAAAAGCTGCAGTA GGGTTCTAATTTTGCTCCATCAATTAGCTGCAGCAGTCCCTTCAAAGTTCAAAACGAAGAAGAATAAGAAAGATAAGAGG ATGGAGGAAAAATAAATCTTGCATGGAAGATTCATGGTTTGTGAATTCAAAATGATGCAGCTTTGATCACTTCATATCTG ATGCAGAAAAAAATAGGCAACAGGAAGAAGAAAGAGGCACAGCCGCACAAGTGTTTTTTGGTTATACACAGCAGCACAAG TTAAATGTGTGGGTTAATGTGTAAGCTTTTTAGGGTTTTCAATTTTGTGGGCTTGTCTGTTTGGGCCCAATCTTATTTTT TAATATAAACCTTTTAAATATCAAGTTTCCTCTGGTTGTGTGGCAGAACTAAAGCATTTTTTTGAAAAGTAAC
CDS sequence (LotjaGi5g1v0131300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCCTTGATGCAGCAACCTTTGAAAGTTTAAGCCCTTCTCGTTTTATCTGCTTCACGGTACCCGATCCAACTTGTTC AGATTCACTGCTCCGAGTTGCGGTGCTTGACTCACCAGTCCAACCCACTGGCTCACCCCAAGTTGGTGCTATGTTAGTTC CTGAAGGCCGTGAAACTGATTGGATCTTCTCCACTAAATTGGGTCATCTCCAACTTCTCTTCAGTTCTCCAGGAATATCC CGCTTGATTTTGATAGGAAACCAATTGAAGGAGGGTGATTCTTCACCACATATTTATCACCGTCCATTAAAATTTTCATT GCATCAGCAAGGCTTTGAGGTGTGGTCAAAACCTCTTCTCCTTGCTTTGTCTCCCAGATCTTTGTTAAAAAATGGTATCC CTGAGATACCCATTTTGAGTTATGTAGATAACTTGGTTTCTAGTGTAGTAATACATGAATGTGTCGGTCATCATGTTGGT GAAATGTTGGTTGAAGATGTCGAGATTGAAAGTGAAGGTGATGAGCATCATGGTTGTCTCAAAAGGGAATTTCGAAGGCG GTTGAGGTTCAAGAGGATGCCAAATTTGATTCAAACAGAAGTTCGCATAGTTGTTCCAGAGACAGATCATAGTTTGATGA GTGTATGTATTGAAGATGCAAAGTTTATGCTTGATCTTCGGGTTTTGGTTCATCCTTACCTGGCATCTATGGTGGCTAGT CTTTCAGTGATCAGTGAATATATAGAGGGACGAATTCAAAATGAGTTTAGACCTAAAGCTTTATGCCTAGGGGTCGGAGG TGGTGCTTTGCTAACTTTTCTGGCTATTCAATTAGGTTTTGAGGTCATTGGTGTGGATAGTGATGCAGAGATTTTAAGGG TGGCAAGGAATTATTTTGGATTGGAAGGCAATGAATTTATCCATGTTGTCAATGGAGATGCTATTAAATTTATGAAGAAA GTCTCATACCAGGGAAAACACAGTGAGAGATCTTTTGCTGATAGTGAGCTTAATGGTTTTAGCCACATGGTGGATGGTAA GGTCAAGCATAAATTTGATGTTGTTATGGTTGATTTAGATTCAAGCGATATAAGAAATGGTACAAGTTCTCCACCATTTG AATTTGTTAGAAAGCAAGTTCTTATTGCTGCTAAATTAGTTCTTTCTGAATCTGGAATCATTGCAATTAATGTCATTACT CAAAGTAAGTCCTTCTATGATAGATTGGTAAAGCATTTTCAGGAAGTTTTCTGTGAGCTGTACAAGATAGATGTGGGGAA TGATGAAAATTTTGTTCTTGTTGCCACAGTATCACCTCAGGTGTTTACAGTTGGGGATTGCAGTAATTCTTTTCTTATGC GACTCAAATTAGTTATTCCAGAAGCATACATAAGTTCCATTAGGAAATTGTAG
Protein sequence (LotjaGi5g1v0131300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTLDAATFESLSPSRFICFTVPDPTCSDSLLRVAVLDSPVQPTGSPQVGAMLVPEGRETDWIFSTKLGHLQLLFSSPGIS RLILIGNQLKEGDSSPHIYHRPLKFSLHQQGFEVWSKPLLLALSPRSLLKNGIPEIPILSYVDNLVSSVVIHECVGHHVG EMLVEDVEIESEGDEHHGCLKREFRRRLRFKRMPNLIQTEVRIVVPETDHSLMSVCIEDAKFMLDLRVLVHPYLASMVAS LSVISEYIEGRIQNEFRPKALCLGVGGGALLTFLAIQLGFEVIGVDSDAEILRVARNYFGLEGNEFIHVVNGDAIKFMKK VSYQGKHSERSFADSELNGFSHMVDGKVKHKFDVVMVDLDSSDIRNGTSSPPFEFVRKQVLIAAKLVLSESGIIAINVIT QSKSFYDRLVKHFQEVFCELYKIDVGNDENFVLVATVSPQVFTVGDCSNSFLMRLKLVIPEAYISSIRKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 229 | 229 | - | – | |
| PANTHER | 46 | 469 | 424 | 2.1E-90 | – | |
| PANTHER | 46 | 469 | 424 | 2.1E-90 | – | |
| Gene3D | 204 | 452 | 249 | 7.4E-36 | – | |
| Phobius | 230 | 248 | 19 | - | – | |
| Phobius | 249 | 259 | 11 | - | – | |
| CDD | 259 | 317 | 59 | 2.60765E-7 | – | |
| SUPERFAMILY | 259 | 439 | 181 | 3.19E-20 | ||
| Phobius | 260 | 280 | 21 | - | – | |
| Phobius | 281 | 470 | 190 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0131300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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