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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0140300 |
| Transcript ID | LotjaGi5g1v0140300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatase 2C family protein; TAIR: AT5G06750.2 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q7XUC5|P2C43_ORYSJ Probable protein phosphatase 2C 43; TrEMBL-Plants: tr|I1L2L8|I1L2L8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0140300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:34640785..34642272) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCTGAGGATATTATAAAGAATGCTGTTTCTGCTACTGAGGATGGGTTTCTTACTCTTGTCCGGAGGAGTTATGGAAT AAAGCCATTGATAGCAGCAATGGGTTCTTGTTGTCTGTTTGGTGTTATCTGGAAAGGGACACTGTATGTTGCCAATCTCG GCGACTCTCGTGCTGTGATCGGTTCCGTCCGTCGATCTAACAAGATTATTGCTGAACAGTTGAACAGAGAGCACAATGCT AGCAAAGAGGAGGTTAGACGAGAACTCAGGGCCCTGCATCCAGAAGATTCAGAAATAGTGGTTATGAAGCAGGGAACATG GCGCATTAAAGGCATCATCCAGGTTTTCTTTCTATTTTCTCTAGGAATAATTTTCTATCAATGTTTTACACTGCCTTTAT CTTTTTCTGTGTAATAATATTCTTCCACTTTGTTGATAGTAAATTGCATAATCATAAGATTTAGCAAATTTCCAATATAT ATAGTATATACATTTAAATGGCATAAATAACAAAAGAAAAACATTTTCTGGTTCAATGGTATGATTATGCAATTAATCTT ATGATTATGCCAGAAAACAATTACAAATGCGATTTTAATCGCCCACGGCACCATTAATTGCAGAATGTTGGGATTAAGTG ATTTTAATTGCGCTTTTGACTACTATGCTCACAAGTCACAACTTTCTATACACGCTTAAATTTTTAGGCTTCGTACTTTT TTGTGTATACAAAATCATAAATCACATTTTATTGCTGCATTTGATTTCTGTAAACTTCCTTGCTAGTGGTATGGGCTCAT GTAATTAAGTAGACAATTATCAATGAGATGCCTGCTGTGATTGCTGGGATTGCTCATTGTAACTTAAGTTTTCTTGTCCA CCCCACAACTGAGACCAGGTATCCAGATCTATAGGGGATGCATATTTGAAGCGGCCTGAGTTCTCTTTCGATCCTTCTTT CCCACGGTTTCACCTTCCCGATCCTATCCGCCGACCAGTGCTAACTGCAGAACCATCTATATGTTCAAGAGTTTTACAAC CTAATGATAAATTCATTATATTTGCATCTGACGGGCTTTGGGATCACTTGACGAATCAAGAAGCCGCCGAAATTGTTCAT AACAACCCGCGAACTGTATGCTTTTTCTACTTGTCCTTACTTTGCTTTTAGATATTGAAAAGTCTTAAGTTTTTCTTATT GTATTATTCTGTTTCATTGTTTGATTGAAACACTAGGGAATTGCAAGAAGACTTCTTAAGGCGGCTTTGAATGAAGCAGC TAGGAAAGGGAAGAGGACATATAAAGAGCTTCAGAAGGTTAAAAAGGGGATGAGGCGTTGTTTCCATGATGATATCACAG TAATTGTTGTCTTCATTGACCATGAGTTACTTGGGAAGAGGAATGTTCCAGTTCCTCAGGTTTCCATCAAAGGTTTTATT GACACGGTTGGACCATCACAGTTTAGAAGTTTCCAGGAAATGGAATGA
CDS sequence (LotjaGi5g1v0140300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTGAGGATATTATAAAGAATGCTGTTTCTGCTACTGAGGATGGGTTTCTTACTCTTGTCCGGAGGAGTTATGGAAT AAAGCCATTGATAGCAGCAATGGGTTCTTGTTGTCTGTTTGGTGTTATCTGGAAAGGGACACTGTATGTTGCCAATCTCG GCGACTCTCGTGCTGTGATCGGTTCCGTCCGTCGATCTAACAAGATTATTGCTGAACAGTTGAACAGAGAGCACAATGCT AGCAAAGAGGAGGTTAGACGAGAACTCAGGGCCCTGCATCCAGAAGATTCAGAAATAGTGGTTATGAAGCAGGGAACATG GCGCATTAAAGGCATCATCCAGGTATCCAGATCTATAGGGGATGCATATTTGAAGCGGCCTGAGTTCTCTTTCGATCCTT CTTTCCCACGGTTTCACCTTCCCGATCCTATCCGCCGACCAGTGCTAACTGCAGAACCATCTATATGTTCAAGAGTTTTA CAACCTAATGATAAATTCATTATATTTGCATCTGACGGGCTTTGGGATCACTTGACGAATCAAGAAGCCGCCGAAATTGT TCATAACAACCCGCGAACTGGAATTGCAAGAAGACTTCTTAAGGCGGCTTTGAATGAAGCAGCTAGGAAAGGGAAGAGGA CATATAAAGAGCTTCAGAAGGTTAAAAAGGGGATGAGGCGTTGTTTCCATGATGATATCACAGTAATTGTTGTCTTCATT GACCATGAGTTACTTGGGAAGAGGAATGTTCCAGTTCCTCAGGTTTCCATCAAAGGTTTTATTGACACGGTTGGACCATC ACAGTTTAGAAGTTTCCAGGAAATGGAATGA
Protein sequence (LotjaGi5g1v0140300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSEDIIKNAVSATEDGFLTLVRRSYGIKPLIAAMGSCCLFGVIWKGTLYVANLGDSRAVIGSVRRSNKIIAEQLNREHNA SKEEVRRELRALHPEDSEIVVMKQGTWRIKGIIQVSRSIGDAYLKRPEFSFDPSFPRFHLPDPIRRPVLTAEPSICSRVL QPNDKFIIFASDGLWDHLTNQEAAEIVHNNPRTGIARRLLKAALNEAARKGKRTYKELQKVKKGMRRCFHDDITVIVVFI DHELLGKRNVPVPQVSIKGFIDTVGPSQFRSFQEME
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 1 | 238 | 238 | 1.4E-30 | ||
| ProSiteProfiles | 1 | 240 | 240 | 33.061 | ||
| CDD | 1 | 240 | 240 | 1.2346E-47 | ||
| PANTHER | 2 | 267 | 266 | 1.8E-126 | – | |
| PANTHER | 2 | 267 | 266 | 1.8E-126 | ||
| Gene3D | 2 | 249 | 248 | 2.5E-65 | ||
| SUPERFAMILY | 3 | 241 | 239 | 1.44E-43 | ||
| Pfam | 30 | 208 | 179 | 1.6E-32 | ||
| Coils | 71 | 91 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. |
Expression pattern of LotjaGi5g1v0140300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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