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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0157800 |
| Transcript ID | LotjaGi5g1v0157800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; TAIR: AT3G23300.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q8H118|PMT1_ARATH Probable methyltransferase PMT1; TrEMBL-Plants: tr|I1L8E8|I1L8E8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0157800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:40650726..40656961) extracted from Lotus japonicus Gifu genome v1.2.
ATTTCGTTTAAAGTTCAGGGACTGTTATATATTTTAACCCTTCTTTTTATTGAATAATAATAAGATAATGAATGACCGTG TACTTAGGAATGGTACTTGATTATATTTTAATGTTTGGTCCATGTTAAGGTTTCAAGCTGTTCCTCGCCCATTAGGAGCT GCAAATGCCGCAAGCTTTGTTTGGGATTAGATCTCATCATCATCATCATCATCATCATCATCATCTCAATCTCAATAAAT AAATATAACAATCGATTCTCTGCTACACTTTTTCATTCATGGATGATGTTACCTTACCTTCACTCTTTCTTCCTAGCAAC CTCTGAACCCGAGTCCGAGGTATGTGTAACCTTCTTAACTTCTCTGTTTCCACTCACTCAGATCCATTTTCAACCTCTTC TTCATACCCTTTATCTTCCCTCATTACAAAATGCTACCTTTCCCCTTTTTCTGCATCTGGGTCACTGAAATTTCTTTTAC CACTGTATTGTTTTCATTAGATGGGTCACTGAAAGCTAGCACCGTCGGTGATGCGTTTTTCTCTTTTTTTAACCCCTTCT CTTGGCCCTTTTCCCTTTTCTTCTTTTGCAATTTTTCTGCAGATTTTATATGCATTTAGCCAGCTACTTATGGCCATACA TAGCTAATGTGCTCACTTAGAATACTAAGATTTTGTTTTGCTCTTCTTTTAGTGGGTCTCTCTCATTTATTGCTGTTTTT CTCTGGTTGGTACATCATTCATTCTTTCTGTTTAGATTTTATGTATTAAAAAATGATTTTTTTTGTATGTGTTTGATCTA ATATGATGTTTCCTTTCTAAGGGATGATGCTGTTTCAAACTTTCAGTCATCATGGAGCTAGTGTTTTTCATTGATTTCAA TATTTGCCTTTCTGTGCAGTTCCTGTTCTGTGGTTCTCAACTGCATCACCTAGGTGCTTTGTGGAAAACAAGTCACTAAG TTGGTGCCCTTAAGTCCAGGGGGAAGCTTTCCTGGGTTGATTAGACTGAATAGTTGCTTTGCCTTGTAAATTATCAAGTT TTTTATCTGCTAGTTGAAGTCATAGTGAAAGTGGTTTTTGTGTAGTGGCAAGAATGGCTAGAGGAAGAGTAGATGGGAAC CCGAGAAAGCGGTTGATCATAACTGTGTTGGTTTTATTGATTGTTGGTGTTTTATTTTACCTGTATTCTCGTAGTAGTGA CTCATCTTCTATTGAGTATGGTAGCAAATCTTTGAAAACTGGTGGAGAAGATGATAGTTCTATACCAAAGACCATTCCAG TGAGTTATCTCAGTCTGAACTGATCTACTTTTACATTTACACTTCCCACTAGGCTCAAATGTTAGTGTCTAATATGAAGC ACTCAAGTTATTTTACTCTTCTGTTCTCTTTGTTAAGGTATGTGATGATCGTCTCTCTGAGCTAATTCCCTGTCTAGATA GAAATCTCATATATCAAACAAGATTGAAGCTTGATCTGACATTGATGGAGCATTATGAGCGACATTGCCCAATGCCTGAG AGGCGTTATAATTGTTTGATTCCGCCTCCTCCAGGGTACAAGGTGGATCTCTTCTCTCCAGGCATTGCTTCTTAGATGGA ACCAACTAACAGTTCATAATATTTAGAAATTTTCTGTCCTTAAAGCTTTTGGTGTCTTATATTGTTTTTTATGATAATAG ATTCCAATCAAGTGGCCCAAAAGCAGAGATCAGGTGTGGAAGGCAAATATACCTCATACTCATCTTGCAACTGAGAAATC TGACCAGAACTGGATGGTTGTAAAAGGTGAAAAGATAGTTTTTCCTGGTGGAGGAACCCACTTCCATTACGGTGCTGATA AATATATTGCATCAATTGCCAATGTAAGCTAGTTTCTCATATTTGGGTTGTCTCTAAAATAATTATCAACATATAAAACT TAAAAATGGTATAACTTTATACTCATGATTGGTATTTCAGATGCTCAATTTTCCGAACAATGTTATAAACAACGGAGGAA GACTCCGTAGTGTTCTTGATGTTGGCTGTGGTGTTGCAAGCTTTGGAGGATACCTTCTTTCTTCTGATGTAGTTGCAATG TCATTAGCGCCAAATGATGTTCATGAAAACCAAATCCAGTTTGCTTTAGAGAGAGGGATTCCAGCATATCTTGGTGTATT AGGGACTCTAAGACTTCCTTATCCCAGTAGATCGTTTGAACTTGCTCATTGTTCTCGCTGTAGAATTGATTGGCTTCAAA GGGATGGCATACTTCTTCTTGAGCTGGACAGGTTACTCAGGCCAGGAGGCTACTTTGCTTACTCATCTCCCGAAGCCTAT GCTCAAGATGAAGAGGATCGGAGAATATGGAGAGAAATGAACGCTCTTGTGGAGCGGATGTGTTGGAAAATAGCTTCAAA GAAGAACCAGACTGTTATATGGGTTAAGCCTCTTACAAATGATTGTTACTTGAAAAGAGAGCCTGATACACAGCCTCCAC TCTGCAGTTCTGATGATGATCCTGATGCTGTTTGGGGAGTTAAAATGAAAGCTTGCATCTCGCGTTACTCTAATCGTGAG TGATATTTGCCGTTTCATACAATGATTTAGTCAGTTTTTTAGTCTTAGGGTCATGCAGTGTTGTCAAATCGCGATCGCGG AATATCGCGGCGAGGCCAAAATCCGCTATTTCATTTAGCGGATAGCGTCGCGGGCAAATAGCGGTATCCGCATAGCGGTT AAAATAAGTAAAAAAATTATAGAAAACAGCTTGTTGTGCTGTTTGTGCTAGTAAAAAACAGTTGCAAAAAATAAATAAAA TTAAGACATCTAATGAAATGCATAAAATGATCATGATAGAACAAATTTTAGAAACAAAACAGGGGAAAAAAAAAACAGAA AATAAAAAAACATTGTATGTAATGGCAAAAATAAACAAAAGATGATGTGAAAAAAGAACAAATATTAGAAACATAGGTTC ACATTCACAATGGAAGAAGAAAAAAAGAATAGATCATGATGGGAGAGGAGAAAAAGGAAGAACAGATATTAGAAACAAAA CAGGACGGAAAAAAACAGAAAACAGTGTGAAAAAAAAAGAAAAAGAGAGTCTGAAAATGTGCAGAAAGAAGGAAGGGAAA AAGAAAAGTAAAGAAAACAGGGTATGAAAAAAGTAAACAGAGGCTAAAAACAAAAAACGGAAGAGTACGTAAAAGAAAAA GAAATAAATAAATAAAAAACAAAAAAACAGAGCATGGCAGAGTGAAGAGATGGGAGCCAGAAACTCGCAGGAAAAGTCAT CAGAAAAGCTATTGGGGTTGCCGGAGATGAGGGTCAGAAGCTTGATGTAGAAGGAGGAAGAGAGAAGGGAAAACTCGAAA GGTTTTGAGGCTTTTATAGAGTGAAGATTTTAAGTTATAAAACTTTTCTTCCATTAATTGGGTACAATTAATTCAGTCGG TGGCTGATTCCCACCTCCCAAGCGGTGCCTTTTTGAAAAAAAGTCCTAAAATCGCACGTGATCTTCTCTTCCACCGCTAT TTTCACTTTGCCCATCGCGGCGCTATTCAGTTTTGCGGCGCTATTGCGTTTATCGCGTTTGCCGCTACGTCGCGGCGTCG CGATCGCGGCACGGCGAATTTCCGCTACGTTATAGCGGCATAGCGGCGCTATAACCGCTATTTAACAACACTGGGGTCAT GAGATAAACTGATAATAAGAATGTCCCCACATCATTAGTAGTTCTAAAACACAAACAGCTATATATAATAATTGATGAAA CAAAACAATTGCAGAAAGAAAAATAAAGAAAAAACCTTCCCTTGTGATTATGCAGCTGTATCCAAAGCATTGACTTTGTT AGTCAGATGGCTTCTGCTATTTTAGACAGGTCCATGTCCTCTCTGATTACATTATATATGACACAAGTTACATAATTGCA TTTTTGTATATATCAATGTTGTATGATTTTGTTCTGTTACATTAACAATTTGTGGTAATAGTTCATGACTCTTATATTAG AAGTTGAAAAATCAATAACTACATATTCTGCTGGTCTATACAGAGATGCACAGAGCAAAAGGAACTGGTTTGTCTCCTTG GCCAGCTCGATTGACTACTCCACCTCCTCGTCTTGCCGACTTTAACTATTCGAGTGAAATGTTTCAAAAGGACATGGTAA TTTAAAATATATCCTGGTTTCCACTTTTAATACCTTCAATAATGGAAGCTTTTACTCATTAAAAGGGAGCAGCAATAAAG CATGCAGGTAACAGTAAAAAGAGAAAATTTATATATGAGAGAACATACTAAGGGGAATGGCAGAAGGGCTTGCTGTAAGA CCCTACATTAGCAAACTAAAACAAGGATGTTCTTGCCCTACTAAATTTGATATGAACTAATTATAAACCTCAATTATTGT CCAAGTGCCATTTTCTTTCCACCATATGAATAATTGTTTTTATTGGTTGAATTCGTGGGAAGTGTCTTCCTTGTCTCTGA AATGATATTGGACACAAATTAATATGCTTAGAAGTAATTTTTCTTGAAGTAGAGTTACATCTAAGGCATGATAACTTTAC AGCCTGCTTGATGTATTACCAGTTATATGACAATTAAATTTGTGCAGGATGCTTGGCAACAACGGGTTGATAACTATTGG AAAATGCTAGGCAATAAAATTAAGCCTGACACAGTTAGAAATGTGATGGACATGAACGCAAATTTGGGTTCATTTGCAGC TGCTTTGAAGGATAAAGATGTTTGGGTGATGAATGTTGTGCCAGAAAATGGGCCAAACACACTCAAGATCATTTATGATA GAGGACTATTAGGAACAGTTCACAACTGGTATGGCTCTTACAACAACCTTCACTATGTTAGCATCAATTCCTGTTTAATT TTCCCCCTTAATTGCACATTTAGTTCTGCTACTATCCTTTATGATGTGTGATTTAAGTTTGGATCCTTTATGATGCGCGA TTTTAGTCCCCCGATAAATTTTTTAGCATTTGTTTGTTGTAAACTGTCTCCTTGCGGAAAATGATGAACATAAAAATGCA TGATACCTACTGAAAGCTAAAATGATCACGATTTTAAAAGACTTGGACTAGTGCCAATCAAGCTAGATGCTTAGTTGCCT TTGTGCTACACTTTTCTGATCTTGTTTTGGCATCAATATAACAGGTGTGAAGCATTTTCAACCTACCCTCGCACTTATGA TCTTCTCCATGCATGGGCCATATTTTCTGCTATCATTGAGAAAGAGTGCAGTCGAGAGGATTTATTGATTGAGATGGATA GAATCCTCCGACCAAAAGGTTTCGTCATTGTCCACGATAAGCGGTCGGTGGTATTGTCTATAAAGAAGTTCTTGCCAGCA TTGCACTGGCAAGCAGTGGCCAAATTTAACGTTGAGGAAGGTTCAGGTCAAGATGAGGATGATGCAGTGTTAATAATTCA GAAGAAGATTTGGCTCACAAGTGAGAGTATCCGAGCCGCAGAAGAATGACATACTTCCACTATGGTTCGGACTCTCACCA TTTCACTCGGAAGTTCAAAATCTCTGCAACTATGAGTGATATATGAAAATGACCACACCATTGTGGAAAATTGCTCTCAG CTCTTTTCAGATGCTGTCAGTGTTGTTTGATATGTCATTCCTATTCTCTTCACTGCAGGCACTAGTTACAGTGGAAGCTC ATCCCAAATCATCCATTTTGAACTTATTTAATTTTGGACATCCCCCCCCCCCCCTCCCCTCTGTTATTGTGATTAAGAAA ATTAGATGAATCTGATGAAATGTAGTTTTTTTAGAACAAATTAATGGGTATTGAAATTTCCTTTTTGTTTTTTTTACCAT TTAGTTTTTCCACCACTGATGCATGGCCATGGCACAATACTATACTTGTGAGGCACTCTAAGCATAACTTCCTAGATGGA AGGAATCAATCACGACAACATATATGTGAAATACATAAATTAAGTCTTTTAAATATTCTAACTCAATTTTGTCCCTAAAA GGCTAAAATAGTTGTGCAAAATTCAAATTGGTCTTGTGATGGGCAAGTTTACCTATCAAACATGAAATTACACACATATT GCATAGTCTTTATGTCATCATGAACCAAATTCAAAACCTACTAATCTCCTTCCTTATTAGAATATCTATGACTAACATAT GATTACTGGCATCTTGAGACACTGCAAACAGTTGTTGCCCACCAAAACACCCTTTTAGGAAACCTTAAAAAGTCAA
CDS sequence (LotjaGi5g1v0157800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTAGAGGAAGAGTAGATGGGAACCCGAGAAAGCGGTTGATCATAACTGTGTTGGTTTTATTGATTGTTGGTGTTTT ATTTTACCTGTATTCTCGTAGTAGTGACTCATCTTCTATTGAGTATGGTAGCAAATCTTTGAAAACTGGTGGAGAAGATG ATAGTTCTATACCAAAGACCATTCCAGTATGTGATGATCGTCTCTCTGAGCTAATTCCCTGTCTAGATAGAAATCTCATA TATCAAACAAGATTGAAGCTTGATCTGACATTGATGGAGCATTATGAGCGACATTGCCCAATGCCTGAGAGGCGTTATAA TTGTTTGATTCCGCCTCCTCCAGGGTACAAGATTCCAATCAAGTGGCCCAAAAGCAGAGATCAGGTGTGGAAGGCAAATA TACCTCATACTCATCTTGCAACTGAGAAATCTGACCAGAACTGGATGGTTGTAAAAGGTGAAAAGATAGTTTTTCCTGGT GGAGGAACCCACTTCCATTACGGTGCTGATAAATATATTGCATCAATTGCCAATATGCTCAATTTTCCGAACAATGTTAT AAACAACGGAGGAAGACTCCGTAGTGTTCTTGATGTTGGCTGTGGTGTTGCAAGCTTTGGAGGATACCTTCTTTCTTCTG ATGTAGTTGCAATGTCATTAGCGCCAAATGATGTTCATGAAAACCAAATCCAGTTTGCTTTAGAGAGAGGGATTCCAGCA TATCTTGGTGTATTAGGGACTCTAAGACTTCCTTATCCCAGTAGATCGTTTGAACTTGCTCATTGTTCTCGCTGTAGAAT TGATTGGCTTCAAAGGGATGGCATACTTCTTCTTGAGCTGGACAGGTTACTCAGGCCAGGAGGCTACTTTGCTTACTCAT CTCCCGAAGCCTATGCTCAAGATGAAGAGGATCGGAGAATATGGAGAGAAATGAACGCTCTTGTGGAGCGGATGTGTTGG AAAATAGCTTCAAAGAAGAACCAGACTGTTATATGGGTTAAGCCTCTTACAAATGATTGTTACTTGAAAAGAGAGCCTGA TACACAGCCTCCACTCTGCAGTTCTGATGATGATCCTGATGCTGTTTGGGGAGTTAAAATGAAAGCTTGCATCTCGCGTT ACTCTAATCAGATGCACAGAGCAAAAGGAACTGGTTTGTCTCCTTGGCCAGCTCGATTGACTACTCCACCTCCTCGTCTT GCCGACTTTAACTATTCGAGTGAAATGTTTCAAAAGGACATGGATGCTTGGCAACAACGGGTTGATAACTATTGGAAAAT GCTAGGCAATAAAATTAAGCCTGACACAGTTAGAAATGTGATGGACATGAACGCAAATTTGGGTTCATTTGCAGCTGCTT TGAAGGATAAAGATGTTTGGGTGATGAATGTTGTGCCAGAAAATGGGCCAAACACACTCAAGATCATTTATGATAGAGGA CTATTAGGAACAGTTCACAACTGGTGTGAAGCATTTTCAACCTACCCTCGCACTTATGATCTTCTCCATGCATGGGCCAT ATTTTCTGCTATCATTGAGAAAGAGTGCAGTCGAGAGGATTTATTGATTGAGATGGATAGAATCCTCCGACCAAAAGGTT TCGTCATTGTCCACGATAAGCGGTCGGTGGTATTGTCTATAAAGAAGTTCTTGCCAGCATTGCACTGGCAAGCAGTGGCC AAATTTAACGTTGAGGAAGGTTCAGGTCAAGATGAGGATGATGCAGTGTTAATAATTCAGAAGAAGATTTGGCTCACAAG TGAGAGTATCCGAGCCGCAGAAGAATGA
Protein sequence (LotjaGi5g1v0157800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MARGRVDGNPRKRLIITVLVLLIVGVLFYLYSRSSDSSSIEYGSKSLKTGGEDDSSIPKTIPVCDDRLSELIPCLDRNLI YQTRLKLDLTLMEHYERHCPMPERRYNCLIPPPPGYKIPIKWPKSRDQVWKANIPHTHLATEKSDQNWMVVKGEKIVFPG GGTHFHYGADKYIASIANMLNFPNNVINNGGRLRSVLDVGCGVASFGGYLLSSDVVAMSLAPNDVHENQIQFALERGIPA YLGVLGTLRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDRRIWREMNALVERMCW KIASKKNQTVIWVKPLTNDCYLKREPDTQPPLCSSDDDPDAVWGVKMKACISRYSNQMHRAKGTGLSPWPARLTTPPPRL ADFNYSSEMFQKDMDAWQQRVDNYWKMLGNKIKPDTVRNVMDMNANLGSFAAALKDKDVWVMNVVPENGPNTLKIIYDRG LLGTVHNWCEAFSTYPRTYDLLHAWAIFSAIIEKECSREDLLIEMDRILRPKGFVIVHDKRSVVLSIKKFLPALHWQAVA KFNVEEGSGQDEDDAVLIIQKKIWLTSESIRAAEE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 4 | 592 | 589 | 0.0 | ||
| PANTHER | 4 | 592 | 589 | 0.0 | – | |
| Phobius | 12 | 31 | 20 | - | – | |
| TMHMM | 13 | 32 | 20 | - | – | |
| Phobius | 32 | 595 | 564 | - | – | |
| Pfam | 70 | 581 | 512 | 8.0E-229 | ||
| SUPERFAMILY | 108 | 329 | 222 | 6.56E-24 | ||
| Gene3D | 164 | 334 | 171 | 9.2E-12 | – | |
| SUPERFAMILY | 371 | 539 | 169 | 2.27E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi5g1v0157800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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