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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0163400 |
Transcript ID | LotjaGi5g1v0163400.10 |
Related isoforms 9 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Non-lysosomal glucosylceramidase; TAIR: AT3G24180.1 Beta-glucosidase, GBA2 type family protein; Swiss-Prot: sp|Q9HCG7|GBA2_HUMAN Non-lysosomal glucosylceramidase; TrEMBL-Plants: tr|G7I2L4|G7I2L4_MEDTR Non-lysosomal glucosylceramidase; Found in the gene: LotjaGi5g1v0163400 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:41890583..41896400) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTTAGCGGGAGTATCTTTCATTTCAGAAAGAATTCATGGCCTGCTGAAGAGTATATAAGCAAATCCACTTTACAGCG TGTATGTATATGCTTTGATTTTCTGGTTTTTTGATTTGCTTTGTGTTATTCAGAAGCTGATAGAGTGATAGGATAAGGTT GCGAAGTTGCAAAAATTGCATTTGATTATGAATGGAAACTGTGTTTGTTTTTGCAGTTTGATTACGATAGTGCTGCTCCT CCTGAACAAGCTTGGAGAAGGAAATTGAACAGCCATGCCAATCTTCTTAAAGAATTTAAAATCACTTTTATGGAAGCTAT AAAGATGGCAAGTCATTTCATATAGTTGTTATCTTCCTTGTTAAATTCATGTGATGCTCTCTATCTGTTCTTACTGTGAT TGAGATTTCAAAATTGCAGGTTCGATTAGGCATTCGCATGTGGTCATATGTTAGGGAAGAGGCTTCTCATGGAAGGGTAA ATTTCGAATTCTCCTTCCTTATCTGGCCATTAATTGCTCTGTGTGTGTGTTACTATGAAAGAGTTACTTAAATCTCAAAT AGAATAGTGTGTTGAAAGTTGGGATTTCTTACTTCATTCTGTTGGCTTGATTTCTGCAGAAAGCACCTATAGATCCTTTC ACTCGAGAAAGTTGCAAGCCGTCTGCATCGCAAGGAGTTCCACTTGGTGGGATGGGGTATGAAGTAGTCCAATTAAAACT AATTAATCACTTGACTGGTTAATTTTGTTTAGAATTCAAATGAGTAATGGGGTACTCTCTACAATGTGTTTTTCTTGCTT ATTATGTTGATTTATTGTTTATATACTTATGCAGGAGTGGCAGCATATCAAGAGGATTTAGAGGTGAGTTTAGACAATGG CAAATTATTCCTGGCTTATGTGAACCGTCACCTGTCATGGCCAACCAGTTCTCTGTAAGACCTGTTTTTCCATTCTTCTC TAATTGGGTGGCTTTAAATATGCTTGTTTTTTGTTAAGATTCATACCTGTATTTATGTGGATTTATTTCCCTTCTCGTGT TATTAAATTTTTACTGATTTGTTCAGCATGTAGCGTCAGACACGTATAATCATATGCATGTATGTATACGTGATGTAATT ATTATTTAGTGCCATTGTAGCTAGCTATTAACCTTTGCCCATCAGCCACCTAAAGAAGGAAAAAGCTCCATGAAACATGA AAATCCTCTCTAGTATAATTATTTATACCCCTAAAAAATATCCATTAAATTTTTAGGATAAGGCTTGGTTTGTTGTTGGG ATGAAATATGAAATTAGTAAGCCAATATTGTACGTTGATAAGTTTTCTTCAGAATGTAATTGTAATGTCCAAGAACCTGC AATTATAATAAGTGGAAGTTATGATGATAATTTGAAGCATAAAAAAATTTATCATGTAAAAAGGGTTAAGAATCTCATCA TGACTTGCAGTGACAAATCATAAAATTAGACAGCCAACGTGAGGGGAGTCAGAGTGCAGTTATGCAAAAAAGCAATAGAA ATAGAAGTCTGTTAATCATGCTGTCCAGAAAAGAAGAGAACAGAAATACTGAACCTAGTTTCTATTTTCACTTTTAATTA AAAAAAAGAAGTTTCTAGTTTCACTTGTTATTACTTTGCGTACATAAGGTTGTTGCCCTCGTACCTGTGATTATGTTTAC TGTTTATGGCCATTTTGATCTGCAGCTTATATTTGGAATATCTGGTTATTTACTTTCATTGCAGATTTTTATAAATAGAG AGGGAGGAAACAAAAGTTTTGCATCAGTTTTGGCTCCTGGACAGCATGAAGGTTTAGTAGGGTAAGGAAGAATATGGTGA AAAACAATCTTACTCAACTTAAAGTGCCTCTTTCGTTAAAGTGACCTTTTTATTTGTTATTTCCAATTATCACTAAAAAT TAAAAAACCATTGGATTACTTTTACTTAGGGGATAATGGATGATAAGTTAATATCTGTCATTTCCACCCAACGTTCTCTT ATTTGACAGTTGAAATTTCATGCAGTCCTATGATCCTTCCATTGACCTTTTTAATGCTTAAGTGAAGTTCTGGCTTATAT TTGTAAATGACGGAACTAAAATTTTGTGGAAGATTTTCATCTTCATTTTGGAGGGAAGTTATAGATGATGGAAATAATTT ACAGGCATGGCAGAATGTGTGTGTGGCTTATAAGAACCAAGTATGGGCACTACAACATTCTAGAAAGCTTTGACTAATAA TTTGCTGTGTGCTGCTGTCCATTTAACACCCATGTGGACATCGACAGAAGCAACCATATGGCTATAGCGAGTTAGCACTT TGTTGTCTGTCTGGCAATGAATATAATCTGAAATCTGCTTATCAAGGCTATTTAGTACCTTTGAGTGCTTCTCATATATC AAGATACTTATATACATTGACCTCATATGTTTCATGTTAATTTTTCCAGGTCTAGCAAGAAAGCTGATGATCAGGGCATA TCATCATGGGGATGGAATCTAAATGGCCAGCATTCAACTTACCATGCTTTGTTTCCAAGAGCTTGGACAATATATGATGG TATCTCCATTTATTTAAGTTCTTCCATTGCTAAATCTGTATGATCCTCGTGAATTCTTGTTTAATAGCTATTTTCTTATT CTTAGGCGAGCCAGATCCAGAACTAAAAATATCATGCCGGCAGATATCCCCTTTCATACCACATAATTATAAAGAAAGCA GTCTACCTGCTGCTGTTTTTGTCTATACGGTGTGTAATTTTCTTCAACTATTGTTAATTAAATTTATCTGTCAAAAAGGC AATGGCTGACTTCCTTAGTATTGTAAGCTGGTTTTTAACCTGTTTATTGTTATACTTTATTATACTAAATACTGGCTAGT TGCTGCAGCCTAGCTTTCTTAGTTGATAACAGTAATAAGAGGTTTCTCTCAGTTTATGTCGAAGTAGCGTAGAATCTGGT ATACTGTCGTCTTGTATGAAATTATAATTCACTAAGATGTCTGGTCCCCTTATGAAAAACATGTGGATAAGACTGTTTGA TTGCCGCAAATCAGCTGCCTCGGTTTGACCCTTCTGGGATGTTGTTGTGCAAATCCTTTTTCTACTTTCTAGCCTATTTG GTGAAAGCCATGGTTTAAGTTTTTTATTTGGACTACCTTGCTTAATAGAATTCATGCAAATGACATAATTGCTGATTCAT AGGTTACATCAGCCTCTTTCCCTTGTTATTTGTGTTATGTATGGTCATTATTGAGAACCAGTTCCCGTTGTCCAGCATTT TGGTGAATGCATGGGGTTATAATTCAGTGATTTACAACACAGATATATCATGAGTTAGATTTTAACCAATAATGAGTTAT ACAAGTTATTGCCCATTATATATATGTACTGATTAGCTGTTCTTGTAATTAATACTCTACAGCAACAATAACCAAAGCCT TTTCCACTAGGTTTGTATCTCTATTTAATTACTGTATAAAAAGCTAGTTTTACCTGAAGTCTTCATCTACTTCAATATGG CATCAAAGGAGTATCATCATTCATGACTTAGTGTGTTTTGGTTCTAACTTTGGGAGTAGAGTCAATTCTCATTGACCAAA ATCAGTTTTAGGTGATTATATAGATGTTTGGTATCGACTTAGAGAATCGATTTTACTCCCAAAATATATAGATGTTTGGC ATCGACTTAGAGAATCGATTTTACTCCCAAAATGAATTTTGTGGAAAAGCTAGAGAGGGTAGCTTCTAAGTGGACATAAT TAATTGTTGGATTTCATAACTGTATTTTGTTACACTACCCTATAGAAATCAGTTTTCCAATAAACGTATCTAAACACCAA TCACTTCACTTTCAACTCACTTTTGAGCTCACTACCAAAATCAATCCTATCCAGAATCAATTCTGACAATGCTGATGCAA AGTACAAACATGCAGTTAATCTATTTCGTTGCTATGTTCCCAATATACGGAACCCTTTGTTTGGTGTAACTACATAACCT GTGTCAAAGCATGGATCTCCCCCCTGAAATCCATAACCATAGAGAGCTCATTGGAATGTCCTTGCTAGTGAGCAAGGTTT TCACCTTCCTTTACAGAGAGAGATCACCATCTAATTGATGGAGCTTGGACCTAGAGACAAGTTCACCATTTGTGTCATTG GCATCAACTCAGCTGGTGGACTCACTGGCATTGAAACAGGCACTGGAGAAGAAATGAATGATATCGTTGCCTATCTCAAA GGAGACCCATCATAATAGTCTGATGAGTTGGTGCTTTGGGAGCTTGCTAGGCATGAGTTAGAGCTACTTTAGTGTGGACG AAGAAGTACACTTGCTGCTACTAACTGATCCCGTCCTTGAAGGGCTGAGTGCTTGAGTCAGGCAGTGCTCAAGGTGGAGT TAGCACTCAAACATGCCATGTTTGAATTTCTAATAGTCTCCCTTCTTGAAATTCCCCTTGTGGAAATGGGGATTGGGGTA GGCCACGGCTTTGTATTTTAACGTCCTTGGTTCCGCCAGGGATCCTTCCCTTGGGGTAAACGTACAGAGATAGGGTATAA CAAAAGTACAAAACCAACTCATTGCGCGGATGGCCACACATCCTCTATCTACTTTTTGAAAGATTTCCTATTAAAAATAA TAATAACAAAAACTATTTTCAACTGGAAGTATAGCCTTTTTTTATGGATTCAAATTCAAAAGAGGAAGTGGTCCTTAGAT TCATGTCTAAGTCAGGAAGCACCTGCTATATTTTTTTTTATGCGGGGCAGAGTGAAACAACTAGGCTTTCTAAAAGGTAT CAAGATAAGGACTATTGGACTCCTGCCCAAACTCTTTGTGAATGAATTCCTCCATCTGAACTCTAACTAATGGTGCTTCT TCTTCCACGATTAACTGTGCAAACATGTAGCTGCGATAACCCTTTGACATCTGCAACAATTGCTGACGTCCTGACATGTT CCCTGATCAGCTCTCCCTAGCAGGCCACCGTGCCTTGCTATGCTTATTTAAGTGTTAGAAATACTATTAATGCTCTCATT GTTTTACATTTTTCACATCCGTAAGCAGGTTGTGTTCTGAAGTGTTCACTGCCTTTTGGTATTCTTGTTTTGATCATTTG GATTGAGGTTGACGTTGGGGGGTTGATGAGGGGCAAGGAAATTTGCGAAATCGTTTCTTTCTTGTTTTCTCTGTTGATAA ACCTACAACTAGTCAGCTACTTCTCTATGAAATAAGAATATAGAATTGTTTGTTTTATTACATTTTCTATTCAAAGTCAG TGAAATATTTGGTATTACTCTGAATTTTCTGCATTCTACATTCTTTTCATATTATCTGTTACATTATGCATTTTGTCTTT TGATATGAAGGAACATGTATTTTCATGATTTTTGAAGAGCTTACTTGTTTCTTTGGTAGTTGGTAAACACTGGCAAGGAA AGAGCTAAAGTCAGCCTTCTATTTACTTGGGCGGTAAGATATTATTTTAATCTGAAGATTTGTTTTAAATTTTCACAACA TTTATTTTTTGACGGTTTGAGGAGGGGGAGGGGTGTTACAATGACTAAGCCATGGATAAATAATCATCCATATTAATTTT CTGCAGAATTCCATCGGTGGAAACTCACACTTGTCAGGAGATCATGTGAATGAACCTTTCATGTTAGTATTTCTTCTAAT CTGATATATGAATGCTTTGTATATAGAGCAAGCTTTACCAACATTTTAACACTATTTTTCATTCACAGAGCTGAAGATGG AGTCTCCGGTGTACTTCTATATCACAAGCAAGTTATCAAACTTTATAGCTATATATGA
CDS sequence (LotjaGi5g1v0163400.10) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTAGCGGGAGTATCTTTCATTTCAGAAAGAATTCATGGCCTGCTGAAGAGTATATAAGCAAATCCACTTTACAGCG TTTTGATTACGATAGTGCTGCTCCTCCTGAACAAGCTTGGAGAAGGAAATTGAACAGCCATGCCAATCTTCTTAAAGAAT TTAAAATCACTTTTATGGAAGCTATAAAGATGGCAAGTGTTCGATTAGGCATTCGCATGTGGTCATATGTTAGGGAAGAG GCTTCTCATGGAAGGAAAGCACCTATAGATCCTTTCACTCGAGAAAGTTGCAAGCCGTCTGCATCGCAAGGAGTTCCACT TGGTGGGATGGGGAGTGGCAGCATATCAAGAGGATTTAGAGGTGAGTTTAGACAATGGCAAATTATTCCTGGCTTATGTG AACCGTCACCTGTCATGGCCAACCAGTTCTCTATTTTTATAAATAGAGAGGGAGGAAACAAAAGTTTTGCATCAGTTTTG GCTCCTGGACAGCATGAAGGTTTAGTAGGGTCTAGCAAGAAAGCTGATGATCAGGGCATATCATCATGGGGATGGAATCT AAATGGCCAGCATTCAACTTACCATGCTTTGTTTCCAAGAGCTTGGACAATATATGATGGCGAGCCAGATCCAGAACTAA AAATATCATGCCGGCAGATATCCCCTTTCATACCACATAATTATAAAGAAAGCAGTCTACCTGCTGCTGTTTTTGTCTAT ACGTTGGTAAACACTGGCAAGGAAAGAGCTAAAGTCAGCCTTCTATTTACTTGGGCGAATTCCATCGGTGGAAACTCACA CTTGTCAGGAGATCATGTGAATGAACCTTTCATAGCTGAAGATGGAGTCTCCGGTGTACTTCTATATCACAAGCAAGTTA TCAAACTTTATAGCTATATATGA
Protein sequence (LotjaGi5g1v0163400.10) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSGSIFHFRKNSWPAEEYISKSTLQRFDYDSAAPPEQAWRRKLNSHANLLKEFKITFMEAIKMASVRLGIRMWSYVREE ASHGRKAPIDPFTRESCKPSASQGVPLGGMGSGSISRGFRGEFRQWQIIPGLCEPSPVMANQFSIFINREGGNKSFASVL APGQHEGLVGSSKKADDQGISSWGWNLNGQHSTYHALFPRAWTIYDGEPDPELKISCRQISPFIPHNYKESSLPAAVFVY TLVNTGKERAKVSLLFTWANSIGGNSHLSGDHVNEPFIAEDGVSGVLLYHKQVIKLYSYI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 292 | 292 | 2.4E-151 | – | |
PANTHER | 1 | 292 | 292 | 2.4E-151 | – | |
MobiDBLite | 87 | 107 | 21 | - | – | |
Pfam | 104 | 293 | 190 | 4.2E-72 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0163400.10, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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