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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0167600 |
| Transcript ID | LotjaGi5g1v0167600.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein TIME FOR COFFEE; TAIR: AT3G22380.3 time for coffee; Swiss-Prot: sp|Q94KE2|TIC_ARATH Protein TIME FOR COFFEE; TrEMBL-Plants: tr|I1JFA0|I1JFA0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0167600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:42736290..42741733) extracted from Lotus japonicus Gifu genome v1.2.
CCCAACACAGAAATTAAAATAAAAAGGGTTTAGAGAGAGAAGAGGCAGCAGAAGTGTTTGCTCTGACAAAATTGAGCGCC GCCGTCAATACTGATCTTCCGGTGACGCGCCGCTGTTGCTATCGGAAACTGACTCGCCGTCGTTCAGTTTGATTACATGT TAGAAGGAAGAAGAAGAAAAGCATGGACAGAACCAGAGAATCTAGAAGATCATCCATGACCATGGCGTCCTCCACCAATG GATTTCCCACGCGCCGACCTCGAAGTGTTCCTCTCAGAGACTCTTCCGGTATCATCACCATCTTCATCTTCTTCTTCTTC TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGTGTGTCTGTGTCTGTGTGTTGGTTCTGACGATTTTT TGTTTCATGGCAGAGGAAGGAGCGGTGGTGCAGGTGAGGGAAGCTTCGAGCAAGAAGGGAAGGAATCGAGAGAAGGATAG GGATTCGTCGAGTCGGAGCAAGAGGAGGAGAGGCTCTCACTCTCACAGGGAAGAAGGCGAACCAAGCACTGAAGATAGCG TCGGGAATGAACAAGACGACGACGTTCGAGACGCTGGGATTTCTCGGATCCGTTCCTCGTCTTCCGCTTCTGATAAGAGC CACCACCGCCGGAATTTTACGGCGGCGAAGCCTCCCCCGCCCCGGCCGCCGTTCAAGGTAGTCGATGAGGTGATCGGCGT GGTAGTTCCCAGGAAGGCCCGTTCAGGTTGGTATTACACAAATGCGGTTTTTCGAATTTTTGTTTGTTTTCGTTTCCCTC GTTTTTGGTATCTTTGGGAATTGGGTTTCATTTGATTTTCTCTCTTTGTCCTTTGTGGTTGATTAATGTGTGTTTGCAGC TTCTTTGAAAAGGTTGCATGAGAGCTGGGTCTCCGGGGGCACCGGCGGTGGGGAGAATCGGACTTTCCGGCAACGGTCGA ATTCTCCGGGAAGGCGAATTGTTGAACCGGCCTGGCCTTCTTCTTCGAATGCTTCTGTTAGGAAGAAGATGGTCAGCGCA ATTTTTTCAATTTTGTTTTTTTGTGGGATTTGTTATTTTGAAGGACTAAGTTTTGAGATGTTTGTGAATGTGATGTTTAA GAAAGCGATTGAAGCTGAACCAGAGACATTGAAATTGGCTTCATCGGACATCGAGATTGAGATAGCCGAGCTTTTAACCG GTTTGAGGAGTTCAAAGGGCCACGAGTTTTCATCGCAGAAGCTGGAAGCAAGCATGGATCACCACGCCTCAGAGTCTTGT CACTCTAAGGATATTGGTGGGTTGAGTTTTGTAGATTCTCTCTTTTATCATTGTTTATTATTTTTGTTGACTTTCTCATT GGCATTTTTATCAGCAGAGAAGAATAAATTGGAAGAGTTTAAAGATCCGAAGTATTCGTGTGAAGATTTATTAAGAATTC AGGGCCAGGAGCAACCAGCAGATGTGGATTGTCATGAAAATGGGTCATCAGCGGTTCCAAAAGAGGACATTGGGGAAGAC AAAGTGAATCCAGGTGCTGGATTTGGTGGTGCTTATGTAGGTACTGGAAGATTTGATGCCCCTACAAATGAATCACAATC ATGCTCCAAGTTGGATGCTGATAAACAGGATTCAGCTTCTACCAGAATGTGAGCACCAATGAATGATAATATTTTTTTTT CTTGCTCTTGCATTTGTTTATTTCGATTTGGATACCTGATCAATGATCCCATTTGGTTGTGGCTCGATTTTTTAGGATGT GTGATGTTCCTGATGCCAATACCAAACGAGTTGGCAAGTTTGAGATAGATCTGATGGTGAGGATCCTTCTAGTTTGTATT CTGGTTACATTTTCATTGCTTTTTACTGTCTGGTATCTGAAAGATTGCCTTTCCAACAGGCTACTCCTCCTATGATGCTA TCCCTAGAAGGGGATGATTTGTCAAAGAGTCAATTGACTTCAGAAACTAAAGCTTTGGCACCGGATGTGGAAATGGTGAG TAGGTTTAGCAATTTTGAAATTGTTTTTATTTGCTCATATCTCTTTACTCCAACCTGTCAACACTTGTGCTGTTGCAGAA GAGGATAGACAGTATTGAAGTTGAAGACAAGGCAGAAAGACCAGTTAACCAAGAGAAAACTCCGGAAGAAATTGAAGAGG CGAATATGATCGAGTTTAAGAAAAAATTGAATGTGCTAAAACATGATTTGGTGACGCCAAACAATGACAATGACATAATG ACAAACAATAAATTGGAAAAGCAGGATAGGAATAAGGAACAGCCAAGTATATCGTCAAATCCCAAAGTGCAGAAAATTGG TAATTTTTTTTGATATTTTTTTAATGTTCAGGATTGTATGTCAACTCTGATTTTGACCCATGTGCTGATTGTTTATAACT TAGACTTCACCCTTGTTTCCTTCTTCAGATCATTCTAGTTCAGTGCCTTTGCCAGCTGGTGTATCAGGACGGCCAAGCAA TCTCACTTCTATTGGGTATTACATCAGCACTTTCCTAGAAACATGTTTTATTTTCTTCATTCTTTTACATAGTTTTTGGT CATATCAATATTCTGACTAAGGTTAATAATTATGATTGGCAGATGCAAGCCACTTTTGCAGAAAGTTGGGGAAACAGATA AAACCAAAGGAGGATCATCGAAATCCCCACAGGTATTACAAGTTCTCATAAAATTGTGTTCTTCTGTTTGTGCGTATTGG AGTCCTTTCTTTATTCCTAGTTTCTGACCGGTGCCCGTATACTAGCGCCTCTCCTATCTTTATGTGACGGTATCGTGAAG AATTCCTTCATAATTCAAACATGCAGGGTGTGAATTCTGTTCTCTCTCAACCAAAACGAAAGAGATGTGCAACCCATTAT TACATTGCTCGTAACATCTTACACCAGCAGTATACAAAGATGAGCCCCCCTTTACCAGCTGCTATTGGCCCAGGTTCTCT GTGTGGCATTAAACCCAACAATGTCGACTGTGTACCCTCTTCTAGCAAGCAATCTCAAAAACACTTTCCAGGTGTAAACC AAAAAGGTGCACAAGAGAAAGTGTTGGTTGCTACAAGCGATCCTAGTCTTGCTGCATTTAGAAGTTCTAATAATGCCAAC CCAATGGATTCAACACACATGCAGCTTGTGCTCCAACAAGGTCCATATCCTGGCTCAATTGGTACTCTAGTGGTATGGTC TTGTTATTTAACTGTTTCTATACAAAAAAATAGATTTAATCCATTTTACTGGTTGCCCCAATGGGTCTTATTTTAGAAAG TAATTTGCTTTAATTTTGAATGTAGCAGGGTCCTGCTTTTGTATTTGGTCCGGGCCAGCATCAAGCATCAGTAGCAGCAC CTACTAATCAGGCAGGCGGTGTGAATTTTCCCAGCAGTGCTTCCTCTTATAATAGGTCTCATAGTTCGGTTGCCGGATCT CTTGATACCTCTTCTACTCTGCCTGCAGCTGCTGCTGCAATGAGCTGTAGCTACCCAAAATTTTCAGCCAACGATTCTCC GTATGTGACTATAGTTTCCAATAATGGGTATTCATTCCCCTATTCAACTGCTGTGATCAGAGGTGTAAGTCCTGGTGGGC CTTTCTACTCTTCTCAAATACTCCATCCTCTTCAGTATCCACAACAGCACCCTCACTCAAAAGTACTGGTTCAACCAAGT TATCCTAATGCAAGCATATCAAGTATTTCATCATCTCATAAGCAGTCACAGGGTGCACAAGGTAATGGTAATAATATCAT GACCTCTAAAACAAGGGAACAGCCGTCACAAAAGCAAAGAACTCCCCAGTCTCATCCTCGGAAGCATGAGGTTGTTGTGG GGGGCGAGAACGTACCATCTGTTGCTAATCGAACATCTTATGCACAGAAGAATGTGCATGGGCAGAACTTCACAATTCCA GTTCAGCCTATGAACCTTTCTTTTAAGCCATCTGCAACATCAGATAAAGCTGGTGGCAACAGTGGGATTTTTGCTGACAA GCAGCAGAAACAACAGGCTTCAAAGGGGGGAGTTGAAATTGTACCATCTCAAGCGTTTGCAGTATCGTTTGCTACATTTA ATGGGACCAGTGTTCCTTCAAGCCTTAACTTCTCATCCATGGCACAGAACCCACAGATACTCCACAGTCTGCCTGATATT GCGTACCAAGGATATCCAGCTGCAAGTACACCTTATACTACTCAGCAGAAGACTTGTTCAATTACTGGAGATAAGAGTGG AGGTAATTCCTCCCAACAAGATGATGTTAAGAAGATCACTCATGGAAAGTCACCAACCATTGGGCCAACTACTCTTGTCT TTGACAATTCATCAAAGAATCAAAACTTTGTGATGAGTAGTACGAGTGGAAACTGGCCTAGTGGCGCCATTGCTTCAACT GCGATAATAAACATGCCTTTTTCCGGTAATGCTTCAGGTTCTCAACAGCAGCCGCAGTCGCTTCAGCTTCAGAACATGCA ACAGCCGCGACCTGCCATGTCTACTCGAAAGAAAGCATTATCTGCCACAAAGTTTGCAATGGACACCCCTGTTTTGTCAC AAAGCCTTGCTCAGTGCAAAAGTTCTAATCAAAATTCTCTCTCTAAGACCTTGGGAAGAACCACAGCTTCTCATGTTCAT CACAAGTCTATTATAACATCTAGTGCTCCAACCGTCAAAAGTTTACCTCAGGAGAAAGGAAGAGACTCAAAGGGTCATAA GCAAATTTCTTTTGGGGGAAATTACACCACTTCGTTGCCAACCCAAGGAGCAAAGGCAACAACCACTCAATAACAACCAG CTTTTTTATACAACAGCAACTGAAACTTCATTTAATGGGGGCAACTTGGTGCCAAATTCAGAGGGAATGAAAGTTAGTTC GTCAGTTCCTTCACATTCTCAATAGACCCTGTATTCTTCTGCTGGCAGTGGCAAAAAGCCTTCCCCAGTTTGTATGCCCC ATCAATCCTGCGCCAAGGTAGAATATATTCTCCGCAATCGCAGATTTAGTCTCAATCTTTCGTTATCGTCATATATTCTG GAGGCCCTTGGCCTTGATGCTACTGTTTCATGTTCAAGCTGCAATTTACAGGTTTATTACAGGGTATGATTGAAGGAAAA AGTTTTGGTAGCTTATATCACCTCATGGCAGCAGGGTGCTGGAGTTTTGCATGATGTTATTTTTTAGGTGGTAGTAATTT TTTTTAGTAGTAGGCACCGCTATCTTATCATATTTCTTGGTTGGTTAGCTTCTGGAAGGTTTTTACATTCTTTGGGGTCT AATTAATTTGGCATATCAAAGCATTTTTATGTGTATATATGATTTTTTGGTCTCCCATAGCATAGCAAAGAATGTACTTG AATTCATTTTTTATTGAAAAAAAACCTGCAATTATTTCTTTCATGTTTTTATTTAATGCCTTGTTCAGCTGCGCTTATCC CACG
CDS sequence (LotjaGi5g1v0167600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACAGAACCAGAGAATCTAGAAGATCATCCATGACCATGGCGTCCTCCACCAATGGATTTCCCACGCGCCGACCTCG AAGTGTTCCTCTCAGAGACTCTTCCGAGGAAGGAGCGGTGGTGCAGGTGAGGGAAGCTTCGAGCAAGAAGGGAAGGAATC GAGAGAAGGATAGGGATTCGTCGAGTCGGAGCAAGAGGAGGAGAGGCTCTCACTCTCACAGGGAAGAAGGCGAACCAAGC ACTGAAGATAGCGTCGGGAATGAACAAGACGACGACGTTCGAGACGCTGGGATTTCTCGGATCCGTTCCTCGTCTTCCGC TTCTGATAAGAGCCACCACCGCCGGAATTTTACGGCGGCGAAGCCTCCCCCGCCCCGGCCGCCGTTCAAGGTAGTCGATG AGGTGATCGGCGTGGTAGTTCCCAGGAAGGCCCGTTCAGCTTCTTTGAAAAGGTTGCATGAGAGCTGGGTCTCCGGGGGC ACCGGCGGTGGGGAGAATCGGACTTTCCGGCAACGGTCGAATTCTCCGGGAAGGCGAATTGTTGAACCGGCCTGGCCTTC TTCTTCGAATGCTTCTGTTAGGAAGAAGATGAAAGCGATTGAAGCTGAACCAGAGACATTGAAATTGGCTTCATCGGACA TCGAGATTGAGATAGCCGAGCTTTTAACCGGTTTGAGGAGTTCAAAGGGCCACGAGTTTTCATCGCAGAAGCTGGAAGCA AGCATGGATCACCACGCCTCAGAGTCTTGTCACTCTAAGGATATTGCAGAGAAGAATAAATTGGAAGAGTTTAAAGATCC GAAGTATTCGTGTGAAGATTTATTAAGAATTCAGGGCCAGGAGCAACCAGCAGATGTGGATTGTCATGAAAATGGGTCAT CAGCGGTTCCAAAAGAGGACATTGGGGAAGACAAAGTGAATCCAGGTGCTGGATTTGGTGGTGCTTATGTAGGTACTGGA AGATTTGATGCCCCTACAAATGAATCACAATCATGCTCCAAGTTGGATGCTGATAAACAGGATTCAGCTTCTACCAGAAT GATGTGTGATGTTCCTGATGCCAATACCAAACGAGTTGGCAAGTTTGAGATAGATCTGATGGCTACTCCTCCTATGATGC TATCCCTAGAAGGGGATGATTTGTCAAAGAGTCAATTGACTTCAGAAACTAAAGCTTTGGCACCGGATGTGGAAATGAAG AGGATAGACAGTATTGAAGTTGAAGACAAGGCAGAAAGACCAGTTAACCAAGAGAAAACTCCGGAAGAAATTGAAGAGGC GAATATGATCGAGTTTAAGAAAAAATTGAATGTGCTAAAACATGATTTGGTGACGCCAAACAATGACAATGACATAATGA CAAACAATAAATTGGAAAAGCAGGATAGGAATAAGGAACAGCCAAGTATATCGTCAAATCCCAAAGTGCAGAAAATTGAT CATTCTAGTTCAGTGCCTTTGCCAGCTGGTGTATCAGGACGGCCAAGCAATCTCACTTCTATTGGATGCAAGCCACTTTT GCAGAAAGTTGGGGAAACAGATAAAACCAAAGGAGGATCATCGAAATCCCCACAGGGTGTGAATTCTGTTCTCTCTCAAC CAAAACGAAAGAGATGTGCAACCCATTATTACATTGCTCGTAACATCTTACACCAGCAGTATACAAAGATGAGCCCCCCT TTACCAGCTGCTATTGGCCCAGGTTCTCTGTGTGGCATTAAACCCAACAATGTCGACTGTGTACCCTCTTCTAGCAAGCA ATCTCAAAAACACTTTCCAGGTGTAAACCAAAAAGGTGCACAAGAGAAAGTGTTGGTTGCTACAAGCGATCCTAGTCTTG CTGCATTTAGAAGTTCTAATAATGCCAACCCAATGGATTCAACACACATGCAGCTTGTGCTCCAACAAGGTCCATATCCT GGCTCAATTGGTACTCTAGTGGGTCCTGCTTTTGTATTTGGTCCGGGCCAGCATCAAGCATCAGTAGCAGCACCTACTAA TCAGGCAGGCGGTGTGAATTTTCCCAGCAGTGCTTCCTCTTATAATAGGTCTCATAGTTCGGTTGCCGGATCTCTTGATA CCTCTTCTACTCTGCCTGCAGCTGCTGCTGCAATGAGCTGTAGCTACCCAAAATTTTCAGCCAACGATTCTCCGTATGTG ACTATAGTTTCCAATAATGGGTATTCATTCCCCTATTCAACTGCTGTGATCAGAGGTGTAAGTCCTGGTGGGCCTTTCTA CTCTTCTCAAATACTCCATCCTCTTCAGTATCCACAACAGCACCCTCACTCAAAAGTACTGGTTCAACCAAGTTATCCTA ATGCAAGCATATCAAGTATTTCATCATCTCATAAGCAGTCACAGGGTGCACAAGGTAATGGTAATAATATCATGACCTCT AAAACAAGGGAACAGCCGTCACAAAAGCAAAGAACTCCCCAGTCTCATCCTCGGAAGCATGAGGTTGTTGTGGGGGGCGA GAACGTACCATCTGTTGCTAATCGAACATCTTATGCACAGAAGAATGTGCATGGGCAGAACTTCACAATTCCAGTTCAGC CTATGAACCTTTCTTTTAAGCCATCTGCAACATCAGATAAAGCTGGTGGCAACAGTGGGATTTTTGCTGACAAGCAGCAG AAACAACAGGCTTCAAAGGGGGGAGTTGAAATTGTACCATCTCAAGCGTTTGCAGTATCGTTTGCTACATTTAATGGGAC CAGTGTTCCTTCAAGCCTTAACTTCTCATCCATGGCACAGAACCCACAGATACTCCACAGTCTGCCTGATATTGCGTACC AAGGATATCCAGCTGCAAGTACACCTTATACTACTCAGCAGAAGACTTGTTCAATTACTGGAGATAAGAGTGGAGGTAAT TCCTCCCAACAAGATGATGTTAAGAAGATCACTCATGGAAAGTCACCAACCATTGGGCCAACTACTCTTGTCTTTGACAA TTCATCAAAGAATCAAAACTTTGTGATGAGTAGTACGAGTGGAAACTGGCCTAGTGGCGCCATTGCTTCAACTGCGATAA TAAACATGCCTTTTTCCGGTAATGCTTCAGGTTCTCAACAGCAGCCGCAGTCGCTTCAGCTTCAGAACATGCAACAGCCG CGACCTGCCATGTCTACTCGAAAGAAAGCATTATCTGCCACAAAGTTTGCAATGGACACCCCTGTTTTGTCACAAAGCCT TGCTCAGTGCAAAAGTTCTAATCAAAATTCTCTCTCTAAGACCTTGGGAAGAACCACAGCTTCTCATGTTCATCACAAGT CTATTATAACATCTAGTGCTCCAACCGTCAAAAGTTTACCTCAGGAGAAAGGAAGAGACTCAAAGGGTCATAAGCAAATT TCTTTTGGGGGAAATTACACCACTTCGTTGCCAACCCAAGGAGCAAAGGCAACAACCACTCAATAA
Protein sequence (LotjaGi5g1v0167600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDRTRESRRSSMTMASSTNGFPTRRPRSVPLRDSSEEGAVVQVREASSKKGRNREKDRDSSSRSKRRRGSHSHREEGEPS TEDSVGNEQDDDVRDAGISRIRSSSSASDKSHHRRNFTAAKPPPPRPPFKVVDEVIGVVVPRKARSASLKRLHESWVSGG TGGGENRTFRQRSNSPGRRIVEPAWPSSSNASVRKKMKAIEAEPETLKLASSDIEIEIAELLTGLRSSKGHEFSSQKLEA SMDHHASESCHSKDIAEKNKLEEFKDPKYSCEDLLRIQGQEQPADVDCHENGSSAVPKEDIGEDKVNPGAGFGGAYVGTG RFDAPTNESQSCSKLDADKQDSASTRMMCDVPDANTKRVGKFEIDLMATPPMMLSLEGDDLSKSQLTSETKALAPDVEMK RIDSIEVEDKAERPVNQEKTPEEIEEANMIEFKKKLNVLKHDLVTPNNDNDIMTNNKLEKQDRNKEQPSISSNPKVQKID HSSSVPLPAGVSGRPSNLTSIGCKPLLQKVGETDKTKGGSSKSPQGVNSVLSQPKRKRCATHYYIARNILHQQYTKMSPP LPAAIGPGSLCGIKPNNVDCVPSSSKQSQKHFPGVNQKGAQEKVLVATSDPSLAAFRSSNNANPMDSTHMQLVLQQGPYP GSIGTLVGPAFVFGPGQHQASVAAPTNQAGGVNFPSSASSYNRSHSSVAGSLDTSSTLPAAAAAMSCSYPKFSANDSPYV TIVSNNGYSFPYSTAVIRGVSPGGPFYSSQILHPLQYPQQHPHSKVLVQPSYPNASISSISSSHKQSQGAQGNGNNIMTS KTREQPSQKQRTPQSHPRKHEVVVGGENVPSVANRTSYAQKNVHGQNFTIPVQPMNLSFKPSATSDKAGGNSGIFADKQQ KQQASKGGVEIVPSQAFAVSFATFNGTSVPSSLNFSSMAQNPQILHSLPDIAYQGYPAASTPYTTQQKTCSITGDKSGGN SSQQDDVKKITHGKSPTIGPTTLVFDNSSKNQNFVMSSTSGNWPSGAIASTAIINMPFSGNASGSQQQPQSLQLQNMQQP RPAMSTRKKALSATKFAMDTPVLSQSLAQCKSSNQNSLSKTLGRTTASHVHHKSIITSSAPTVKSLPQEKGRDSKGHKQI SFGGNYTTSLPTQGAKATTTQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1139 | 1139 | 0.0 | – | |
| MobiDBLite | 1 | 131 | 131 | - | – | |
| PANTHER | 1 | 1139 | 1139 | 0.0 | ||
| MobiDBLite | 10 | 24 | 15 | - | – | |
| MobiDBLite | 47 | 64 | 18 | - | – | |
| MobiDBLite | 155 | 197 | 43 | - | – | |
| MobiDBLite | 161 | 175 | 15 | - | – | |
| MobiDBLite | 229 | 254 | 26 | - | – | |
| MobiDBLite | 232 | 254 | 23 | - | – | |
| MobiDBLite | 444 | 534 | 91 | - | – | |
| MobiDBLite | 489 | 503 | 15 | - | – | |
| MobiDBLite | 517 | 534 | 18 | - | – | |
| MobiDBLite | 775 | 823 | 49 | - | – | |
| MobiDBLite | 775 | 812 | 38 | - | – | |
| MobiDBLite | 1084 | 1105 | 22 | - | – | |
| MobiDBLite | 1084 | 1141 | 58 | - | – | |
| MobiDBLite | 1120 | 1141 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of circadian rhythm | Any process that modulates the frequency, rate or extent of a circadian rhythm. A circadian rhythm is a biological process in an organism that recurs with a regularity of approximately 24 hours. |
Expression pattern of LotjaGi5g1v0167600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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