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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0173600 |
| Transcript ID | LotjaGi5g1v0173600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methyltransferase; TAIR: AT3G63410.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|P23525|IN37_SPIOL 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic; TrEMBL-Plants: tr|I3S991|I3S991_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0173600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:44361647..44364999) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTTCTGTAATGCTATGTGGAACTGAAAAGCTTGCACTTTTGAGTACCAGAACCCCATATGCAAATGGGTTTGGTTT CACAGGTTCAGATTTGCACGGGAAGAGCTTCCCCAAATTGAGTTTCACTGCTACTGCTAGGGTTCCCAATTCTAGGAGGA CAATGGTAGTACCTAGGTGCAGTGTCTCGGCTTCGCGGCCGAGCTCGCAACCGAGGTTTATCCAGCACAAGAAAGAGGCG TTTTGGTTCTATAGGTTCCTGTCAATTGTGTATGACCATGTTATAAACCCTGGTCACTGGACTGAGGACATGAGGGATGA TGCTCTTGAACCTGCTGATCTTAGTAATAGGAACATGATAGTTGTGGATGTTGGTGGCGGCACCGGTTTCACCACATTGG GGATTGTTAAGCATGTGGATGCGAAGAATGTTACCATTCTTGATCAGTCACCTCACCAGCTTGCTAAAGCTAAGCAAAAG GAGCCGCTTAAGGAGTGTAAGATAATTGAAGGGGATGCTGAGGATCTCCCTTTTCGAACTGATTACGCGGATAGATATGT TTCCGCAGGAAGGTACTTGCTCTGTCTTCACATGGTTTAGTTGCTATGAAAGTGCATGTCCCTATTGATGATAATTTTGC ATTAGCAGGGTTTAGTTGCATTGTTGTTATTCAAGTGTTTAACTAACTTATAACTTATTCAGTGAAAAGTGTTAATGGTT ACTTTATATTATTGTTGTTTACTTGTTTCTCCTGTCCATGAATAATTATCCAAGTGCATGCCCCTATTGATGACAATTTT TGCATTAGCTTGATTTAGTTGCATTGTTGTTATTCAAGTGTTGAAGGTTACTTTACATTATTGTTATATAGGTATGCATA GATCTAAAATAGGCTTGCTTTGAAAGAGGTAATGATGATATGCTTTTGTTTTTCAGTATTGAGTACTGGCCGGATCCGCA GCGAGGTATCAAGGAAGCATACAGGGTTCTGAAAATTGGGGGCAAAGCATGTTTAATTGGTCCGGTCTACCCTACATTTT GGTTGTCGCGCTTCTTTGCAGATGTTTGGATGCTTTTCCCAAAGGAAGAAGAGTATATTGAGTGGTTTGAAAAGGCAGGG TTTAAGGATGTCCAACTAAAAAGGATTGGTCCAAAGTGGTATCGTGGGGTTCGCCGTCATGGCTTGATCATGGGTTGTTC GGTGACTGGTGTTAAGCCCGCATCTGGAGATTCTCCTTTGCAGGTATTTGTCATCTGTACTTCTCAATCTATATTATTGT TGATGTTTGACCTTGTTTTCTTTGTGGCATTTATTGCTGTTCTGTTTTACCTCAAATCAAAGACAGTTTGCATGTTGCTG TACCTCCTTAATGGTGTCATGGCGTGTATCTGTTTGTGCGATACATCCTACCATTTTATGGTTCGCTGACTTGGACAGTT AATTTCAGCTTGGACACCCTCATACTGGCGACCATTTCATATTGAACATTAGCGTATTCATCCCATTAGATGTGGCCACT GCAAATTGAACCTTGAGATATATATGCTGTTGTTCTCTCTTTTCATGATTACTTAAGTGGCATTTGATTTGAGAACATAT TCATTCCTTGATTTGCATCTCTTTTTCTTTCTATTCATACTTAAAAGGTCTCTTTTAAAATCTTGTCATGTTTTTTTCCC TTGGATTATTTGACAATTCATGATTAAGCATGGTTACTGCATTTTACTTGAAATGGCTCATGGATGCTTGTGTGCAACTC TTATTAGTCATTTGTTGTTAGTTGTAATAAAACTACTTTAAATGTTTTTGTTCTGTTAGTACATCTAACCTAAAAAAATT AGCTCCTGAAAATTCTAAAATGTGGCTGCGAAATTATTTGAATCTTCTCCCTATTTAGTGTGGTAGACTAGAAGGGGCAA TCATTGCTGATTGCCTGTAAACAAAAAAACGGAGATTCAATGTGGAGATTAAGTACATGAGGTTTAGATCCTCTCTTTTT TCCTTATGGAACAATATAGGACCAAGTTTGGAGACAGAAAGACAATTCTTCTGCAGGATTTTTGGATTCTAGCTCAATAA TTTGTTGGTCTTGCATAAGATTTCATTGTGTCTCCCTTGAAAACGAGACTTTCATGTCTCAAATGGAAAAGAGAGTACCC GAATTTGAATATGTCATTTAGGTGTAGTTTAAGCATACAAAAAAAAAAGTGGGTTAGCTTAAGTGGTAAGAGCTAGGGGA CATAAGGGTTGGGGAGGGGAAGGTCCAGGGTTCGAATCCTGGAAGGGAAATTTGAAGGGATTTTCTAACTTACTAACAAC TAACCACTAACATTTGCCTATCAAAAAAAAAAAACATACAAAGTCATTCCAGCTCTACTGTGGTGGTGGTCTTGGAAGTT CAAGCAGCGTCTACTTAGTAACAAAGCACTACTTGTAGCTAGAAAGCCTAGAATGAGTATCTTTTTAACATTTCTACCAA AGATTTATATCTCGTGCATTGAATATAAAATTATCATTTTAAACACCAAAATTTATTAAGTGACAATGAGCTCTTCTAAC CTTCTGTCACTTTGTAGTTTGTACTGTTAGCATATTTGATATTTATGCAGGCTTTTATGCACTTGTGCTTAAGTACAACT GGTCATATTCTGATGATATGGAAAGAGTACAAATGGAAATAGTTGACTGTTGAGAAGTGTCAACGAACCAAAATAAAAAG TAGAAAACAAGAATTATACACTTACTAAAGGGAACTAACTGGATTTTACTGTTTACTTTCACTTTTTAATGGACATGCAC TGTTAGTTCAAGGGTTGCTTCAACTCAAAAAGGTCATCATTCTTTTAATAATTTAAGTTCAATAATACAATACAGGTTTA TTGTAGTAGGCTGGCAATTGTACTCAGTTTCTTCAATTGAATATTACTTTTAGGTCTTTTGAGTAAATACTATGAACCTT TGTTTGCCACTGCTGTTGCCCAACATCATAGTTTTCTTGCTTCACTTCTAAATGGCTCTATTCAGCTTAACAAAGTGATA GGATTTAAAGGTTTATTGCACATGTTAATTTTTGTCAAATTATCATCCCCTTACATTGAAAAAATGGCAGTTCATTATTA TATTTTCTTATCACTTTCACAAGAGGGAGCATCATATAAAATATGTTGATTGAGTTTGGTTTCACATTTTGCTGCAGCTT GGTCCGAAGCAAGAAGATGTTAAAGAGCCTGTAAAACCTTTTGTTTTCTTCCTGCGCTTTCTTTTGGGAGTCCTGGCTGC TTCATGGTTTGTATTGGTTCCTATTTACATGTGGCTCAAAGATCAGATTGTTCCGAAATCTCAGCCAATCTAA
CDS sequence (LotjaGi5g1v0173600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCTGTAATGCTATGTGGAACTGAAAAGCTTGCACTTTTGAGTACCAGAACCCCATATGCAAATGGGTTTGGTTT CACAGGTTCAGATTTGCACGGGAAGAGCTTCCCCAAATTGAGTTTCACTGCTACTGCTAGGGTTCCCAATTCTAGGAGGA CAATGGTAGTACCTAGGTGCAGTGTCTCGGCTTCGCGGCCGAGCTCGCAACCGAGGTTTATCCAGCACAAGAAAGAGGCG TTTTGGTTCTATAGGTTCCTGTCAATTGTGTATGACCATGTTATAAACCCTGGTCACTGGACTGAGGACATGAGGGATGA TGCTCTTGAACCTGCTGATCTTAGTAATAGGAACATGATAGTTGTGGATGTTGGTGGCGGCACCGGTTTCACCACATTGG GGATTGTTAAGCATGTGGATGCGAAGAATGTTACCATTCTTGATCAGTCACCTCACCAGCTTGCTAAAGCTAAGCAAAAG GAGCCGCTTAAGGAGTGTAAGATAATTGAAGGGGATGCTGAGGATCTCCCTTTTCGAACTGATTACGCGGATAGATATGT TTCCGCAGGAAGTATTGAGTACTGGCCGGATCCGCAGCGAGGTATCAAGGAAGCATACAGGGTTCTGAAAATTGGGGGCA AAGCATGTTTAATTGGTCCGGTCTACCCTACATTTTGGTTGTCGCGCTTCTTTGCAGATGTTTGGATGCTTTTCCCAAAG GAAGAAGAGTATATTGAGTGGTTTGAAAAGGCAGGGTTTAAGGATGTCCAACTAAAAAGGATTGGTCCAAAGTGGTATCG TGGGGTTCGCCGTCATGGCTTGATCATGGGTTGTTCGGTGACTGGTGTTAAGCCCGCATCTGGAGATTCTCCTTTGCAGC TTGGTCCGAAGCAAGAAGATGTTAAAGAGCCTGTAAAACCTTTTGTTTTCTTCCTGCGCTTTCTTTTGGGAGTCCTGGCT GCTTCATGGTTTGTATTGGTTCCTATTTACATGTGGCTCAAAGATCAGATTGTTCCGAAATCTCAGCCAATCTAA
Protein sequence (LotjaGi5g1v0173600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASVMLCGTEKLALLSTRTPYANGFGFTGSDLHGKSFPKLSFTATARVPNSRRTMVVPRCSVSASRPSSQPRFIQHKKEA FWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMIVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK EPLKECKIIEGDAEDLPFRTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACLIGPVYPTFWLSRFFADVWMLFPK EEEYIEWFEKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQLGPKQEDVKEPVKPFVFFLRFLLGVLA ASWFVLVPIYMWLKDQIVPKSQPI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 344 | 344 | 4.8E-217 | – | |
| Phobius | 1 | 309 | 309 | - | – | |
| PANTHER | 1 | 344 | 344 | 4.8E-217 | – | |
| ProSiteProfiles | 72 | 281 | 210 | 103.336 | ||
| SUPERFAMILY | 76 | 266 | 191 | 1.7E-37 | ||
| Gene3D | 86 | 274 | 189 | 6.5E-34 | – | |
| CDD | 121 | 218 | 98 | 5.45828E-7 | – | |
| Pfam | 122 | 216 | 95 | 2.8E-17 | ||
| Phobius | 310 | 333 | 24 | - | – | |
| TMHMM | 311 | 333 | 23 | - | – | |
| Phobius | 334 | 344 | 11 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. | ||
| Biological process | Methylation | The process in which a methyl group is covalently attached to a molecule. |
Expression pattern of LotjaGi5g1v0173600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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