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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0175000 |
| Transcript ID | LotjaGi5g1v0175000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phospholipase A1; TAIR: AT2G30550.2 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q3EBR6|PLA16_ARATH Phospholipase A1-Igamma2, chloroplastic; TrEMBL-Plants: tr|I1JF46|I1JF46_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0175000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:44721781..44728962) extracted from Lotus japonicus Gifu genome v1.2.
ATTAGATCTTAGTTGTTCTTGTTTGATAGGAAATTGCTTCCTATATATATCATACTCTATCTTCCTTTTACTATACTCTA TCTCCTAATAACTCTCATGAATAAATGTGGGGGAATCATACATATAAGCCAAAGGAATTGTTTTAAGATCAAATTTCAGT ACTTTTAGAGATTAATGAGGTAAAATCATAATTGAATACATCTAAAGTGACTTCCAAAACAAAATTAATCTGACCATATA AGATCCATAGACTCAGTCTTGTATAGTTAGTTGCCATGAAATGAATTTACATAGTGATGACTTATGTGTGAAGTCAATAA AAAAACTAAAAATTATAAAAAAAAGACAGTCAAATCAGACTTTTCATGCTTGCGTTGCAGAAGAAACACGTTTCATATAT TGAAAAGGTGAAATTAGTGTGAACAAAATATATTTTCCCAAGAGAAACGTATATATGGATGCTCTTCTACCTAATTATGT ATTGCACTGCGACTCCAGAGTCTTCACCATATACTTATTATATACCACACAAACAACAAACTCATGCTCCCATTAAGTTT CACCTCATATTCATATGCATATAATTGAATGTTGGAGTTAGCTAGCTAGTTGAGCTCCCCAACATTGTCAATCATATCAA TGGCTGCTTCAAGTTCAATCTCTCACATGCTCATTCCCTCCCCCAAAACGCACCAACCTATAAGCTTCCGATCCAAACTA AACCCAACACCACCACCATCTCTCCCCCAAAACCAAAAGTCAACAAAACTCATCGTCCACTCCAAAAGCTCCTTATCCAT GTCACCAACCACCACCACCAGCGAGCTCCACAGAGAACAACAACATCAACAAGAACCAGCAGTAGTAATGCATCAAACTA CATATCATAAGTCAGAGGAACAACAGCAACTCTCCGACGTGTGGCGCGAAATCCACGGCGAGAATGAATGGGCCGGGCTT CTAGACCCCATGGACAAGACACTACGGCAGGAGCTGATCCGCTACGGGGAGATGGCTCAGGCCTGCTACGACGCCTTCGA CTTCGACCCTTTCTCTAAGTACTGCGGGAGCTGCCGCTTCACCCGCGGCAACTTCTTCAACTCCCTTGGCATGAGTGACC ACGGCTACACCGTCACGCGCTACCTCTACGCCACCGCCAACATCGACCTCCCCAAATTCTTCAAGCAGTCTCGCTGGCCC AAGATGTGGAGCAAGCACGCCAACTGGGCTGGGTATGTTGCTGTCTCGGACGACGCCACCTCCCGCCGCCTCGGCCGCAG GGACATCACCGTGGCATGGCGCGGCACCGTCACGTACCTTGAGTGGGTGGTGGACCTCATGGATTTCCTCATACCCATCT CCTCCCAGTCCATCCCCTGCCCTGATCAAACAGTTAAGGTTTGTTAATTAGCTCCTGCTCTTACGGTTTTACCTATAAAA GATGGTTTATTTACCACACACCTCACTTACTTTTTCTTTCTTTTTCATTCACTTGTTTTGTATTTCTCTTCTTCTACTTT CATATCATGCCACATGTTTCATTGTCTTTTTGTTCTACTTCAATCTTTAGCTGGGTGGTGTGAGTATAAAGTGTCATACA ATCTATTTCCATCAATATATTCTTTATGCATACAAAGAGGAATCAAATCTGATGGAGAATATCAACCTCAAAAGATACCA ACATTTTTTTTTACATAGGAAAGTAAATATACCAACAACTTAAATGAATTATCAAATTTGTTAACTAAATAGTTTATGCT ATTTTTGGCACAAAGGTGGAATCTGGGTTCTTGGAGCTTTACACCGACAAAGAACAAGACTGCAGTTACTCCAAGTACTC GGCAAGGGAACAAGTTCTTTCAGAGGTGAAGAGGTTGATGGAGATCTACCATGATGAGGAGCTCAGCATCACCATCACGG GACACAGTTTGGGGAGCGCATTGGCTATTTTGAGCGCCTATGACATCGCTGAAACAGGGCTAAACATGAAGAGGGATAAC AGCATTGTTCCAGTTTCCGTGATGTCATTTTCAGGTCCGAGGGTTGGGAATGCGAGGTTCAAGGAGAGGTTGGAAATGTT GGGGGTGAAGGTGTTGAGGGTGGTGAATGTACATGATTTGGTGCCCAAAACGCCAGGGTTTCTGTTCAATGAACATAGGC CGCTGGCAGTGATGAAGATTGCGGAGGCTTTGCCTTGGAGTTATTCACATGTTGGGGAAGAGTTGGTGTTAGACCATAAG AACTCGCCTTTCCTAAAGCCTGATGCCGATGCTGTATGTGCCCATAACTTGGAGGTTCTTTTGCATTTAATTGACGGGTA AGTGTTCATTCCACACCTTTTTTTTTATCTTTACCATTTTTTCTTCTAAGAAGTCATTAGTTATGGTTACAATTGATATT TTAATTGATTTTATTTGTAAATATCTTGTTTAAAATTAAATATTTAAAGTCAAAAGTTAAAGTGTATCTATTTCAGCAAT TAAGAATTAAAGAATGAATTTCATAAAAATAAGTGGAATTTAAATAATGCAGCTGTAAATGTAATAGAACAACTGAAACA TCAATCAAGCCTTTTAAAATAGACAAACAGGGTGACCACGTGAATCATGTCTAAATGGTAAGGTTTCAGAGTAGAAAAGT TTTCAATATCGACGTACAATAATGTAGAAAGAAATGATTGTTATTGGGAAAACAAGGAGAATAGTTGGCAACAATTGGCC TCAAGTTTACCATAACTGTTAGACCATAGTAGTTGGCAACAATTGCCATCAAGTTTCTCATAGTCAGTGTATAGTACGCA CTTGGGATCAGGTTTCCATAACAATTAACAACAATGATTTTAAAGACTTTCCTATTACCTTCCTATTTCCACCTTTTATT TTCTTCCTACATTTTTTTTCTATTATTTCATTAATCACATTTTATATATATTTTCTCTTTTATCTTCATTAAAAAGGGAT GATATACGACGTACTCACGTACATCCAGATATAACTCCCATAAACAGATAAACTCTACCTTGTAAGGAACTCACATTTGT TTAGAAGAATAAATAATTAACTATTAATTGTAATTTGTAAACTTCAGTCTGTATTTTAGGTAGGATAGGTCTAGATTAGG GAATCCATTGATTATTGTAAGCATGTAACTCCAGGACATGGGAGATCAGAACTATATAGCTATTACTATAATACTAGTTA CACGCATAAAAAAATTGGTCAAATCGGGGAAGGAAAGTGATAGATGGTTAGTATAATAAGGTTTCAATATTTTAATTAGC TGCCCATGATCACTAAATGTGAATAATGGTATTCTTTTAGGGCACACACACATTACGACAATGAAATGGTGCATTATTGA CTAAAATATGGGAATGCACACAAATTAATTATTATCTAGTGGGATTTCATTATTTAAAGTTTTTTACTGAGGCGTTCATT TTTTTTTTTTGCTACATCGGAAAATTTTACCGAGGCGTTCATACCATTATAGAATTGATTTTTTTTTACGAGGGAACCAG TTTTTAGTTTTCTTTATCTTGTGTTCATAGTAGAAATACTTATAGTTTATTGGAAGGTTAATATAATACAACAATGATTA ATGTTCACCCTTTGAGTGTAGATCACTACAGAAATATAAAGAGATAATAGATAAATGATATATGATATATGATGTGATGT GATTAGAAGAGAGGGATATGTGATTAGAAGATAGGGATGAAGAGAAATAATATGTCCCAATGTGTATGTACCATTTGGTG GTACATATTATTACTTATTAGTGAAGTAATATTGGTTTCATATGACTGATACTAGTCGTTTGACCAGTCAAACCTAAGAG ACGACATATTTCTTCACCATCGAGTTGGTCAAGGGATGAAAACAAAACGATGTAGCAATTTGAGCAAATTAAATAGTGAC ACTCACATTATAGTATAACATTAGAAAGTGATATGTAGTAGATTAACAATTAAACCAAGCTTAATTAATTTCTGCTGATG ATAGTGTCTAATCATGATGATTTTAACTTAACGTTTGCTGAAATCACTCATGCAAGTGGGGTTAATTAACTTTTGGCTTG GCTGCATTTATACGCAGATACCACGGAAAGGGGCAGAGGTTCATCCTATCAACTGGTAGAGACCCTGCTTTGGTGAACAA GGCCTGTGATTGCTTAAAAGACCATTACTTGGTTCCACCACACTGGAGGCAAGATGAGAATAAGGGCATGATCAGAGGCA ATGATGGACGCTGGGTGCAGCCTGAACGACCAAAACTTGACGATCATCCTGAAGATATGCTTCACCATCTCAGGCAACTA GGTCTCACTTCATCTGATATTTGAATGATGAACTGAACAGAGAGTGATATATATAACATTGGAACTGGATTTATTAAAGA CTTTGTGGTGAGGTCGTAAATGTGAATGTGAATGAAGTTATGATAATAATGTATATACTGAGTAGAGAGATAAAACCACC TAATAATGAGAAGTCAAAGAGATGATGATAAACATAGAAGGAATTATGATGAAAGAAAATATATATTCACACTGATACTA TTTCTGAAGACTAGGACATGTGCCCTTAATATTTGGTCTGGTCTTTTGGATTTTGAAGAGAATTTTTTACGCCCACTGTC AGTAATGGTAGATTTCGGACGGATTACTGATAGCCACAAATCTATCGGTATAACCTGCGTTTGGTAATAGTTACCATGGT AACTTACCGACGGAAAAGGACGTCGGTAACTTACCGTCAGTAACCTAATGACGGAGAAAGGCTGTTTATAACTTGCCATG ACATTCCCCTGTCTTTGGCACTATCCTTGTAGTTTAGAGTGTTGTCCAAGAATAGAGCAACAATCAATGCAACAGCTGGA AAATAGAAGACAGTGTAAAGGAAATCATTGAACTACAAAACCAAAGGGGGGAAATAACTTCATTGAAAAGAATGCTATGT AAAGCTGTCAAGCAGCTCTTTTGAGGGCAGTAATCAATTCAGTTTCAAAGGACAGAAGTTCTTTTCCAAATGATTGAAAA TAATACAGTAATATAATAGTAATTATTGATATATGGAGGGAAATTAGCTCTTCTCATGATTTGTCTCTAGGCATGTAGAA TAGATAAGCAGATAGATAGATAGATAAAACAACAAACTCACCCATCCAGCCTGAAATATTGTGAGGTATTTTATGCTTCT ACATGAGAAAGGCTATGAGAGTGCATAATGAATTGATAATGTAAACGCATCTGCACAATTTAACAGCCTCACTTAGGACT TAGGAGAAACTACAAGGAGAATTGTGAAGCTTCCATCAAGCCTCTCTAAAATCACTGTACAGCAGAAGAGGGGAAAAGAA AGAGTAATTGACCAGTGTGTCTTATGTCAAATTACAACTTATATATTGTAATGGTTCTTCTATTTAGTACCGGAATCCTT TCTTGACCTATAACATTCCTTATCAAAATATAAAATCCATTACTTTGACTGCAACCTACTTGGAAATTGTAACAAATGCT TTCTAAGAAAGCAATAATCTTACCGGTACAATTGATAAGTTTGCTACATATATCTAGATTTCCATTTCTATTCTGCAGCT CTTGTTCCTTAAAAAGCTACAGATTCAAATTAAAGTTGTAACTAACTTACATGAACTTGCATCTCTTTAATTAAGGACAT ATCGAAAAATTTGCAAAAAAAAAAAACTAAGGATAAAAGGAAGAATTAAAAAGCATTTGCAGATGCCATTAGAGTGATAA TCAAATAAAATGCATCAAAATCAGAGTATGCCTCAAGCAAATTCAAGTTTAACGTACCAGAGTAGGCCACGTGGAGGAGG AACATCCAAAGAAGTAAAGCCACTAATGCATTGGGCTGCAGAACCTTCACCCACCTTCAGTATGTACTGAAGAAACCAAA ATGAAAACTGGATGAGGGACGAACATGGCAACCATTCATGCATAAATGAATGAGTTAAATACATTGCAAACCTCCATACT AGCTTTATCTTAAAGACTATAGTCAGTTTTTGTTTTCATGTTTTTTATAGGAATTTGTCTTTCCCTCCGGTAATCCCTTT TTCTCTTCACACTTTTTCTCATAATAATAAAAGCAACTAATCAGGTCTGAAATTATACCTCCTACGGAGCAAGATCAAAA ACCTTTCCACCAATAATAGTGAAGAAAACAATAGGCATTGAAGAGATCTTTCCACAGGCAACAGATGATGCTCCCATTGG GTTAGGCATTTTATCACAAAACTGCAATAATCATGAAGAAGCTGAAGTCAATAGGCGAAGTAGGATTTGAGTACACAAAT GGCAAAATAAAGACTCAACTACAGTGCTTGATCATTCCAAGAAAGCTTGATCATTGCAAATTCATATTGTATTACGAGCA TCACTAGCATTACAATCTATACCTCACAGTGCAATCTATAACAGTACTAGCAAGAAAGTGTTTGATGTAGTAGTGAACCT TTGAAACCCCAAACACTAATTCCTATAGTTTTCCAAAAAATTATATATCTGCTAATGACCTTGGTACACAAAAATAGCAG CAGTCAGCCAAACAAATCTAATGAACTGAATCAACAACACTTGAAAGGTCACTGAACAGTGAACACTGATAGCAACTCTA AGTCAAGTAATTGAAATTAACATACAGAACTGCATCAGACAAATTGGCATCATTAGCATCAAATACTTATGACCACTCAA CAGCAATAGCAGTATTTTAAAATATTGCCACAGCCCCAGCTTTGAAAGTCCCGCAGAAAATTTTCAGCAACAATCCCTGA ACTCTCACTTAGCTTTATTCTTTCTATTCCCCCACTGATTAGAACAAGTAATCTTTCTCACTACCTTCCTTTATTCAAGT TCTTGTGTTCTCTCTTAGTATTTGTGTGGGGTGGAAAGAAACAAAGCATAAAAGGGCAATGCAAAGTGAACAAACTTTTA CAACTGTCTCTCCACAAAGATGACCATTCCCTTCCCCCCAATACTCTTTTTCACTTGTCTCTTTTGCTTCCCCCGCAAGC AAGCGCATTTCAGATCTGATATCCCAGAAAGGGGATAGTGACCGTCATGCAAGCAACTTAGAAACAATCCCCCACTCCCC TTCTCCCCCCAAAAAAAATATGCATGTGAGCTGGGAGCACACAAAATGATTCTAAAAATTAG
CDS sequence (LotjaGi5g1v0175000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCTTCAAGTTCAATCTCTCACATGCTCATTCCCTCCCCCAAAACGCACCAACCTATAAGCTTCCGATCCAAACT AAACCCAACACCACCACCATCTCTCCCCCAAAACCAAAAGTCAACAAAACTCATCGTCCACTCCAAAAGCTCCTTATCCA TGTCACCAACCACCACCACCAGCGAGCTCCACAGAGAACAACAACATCAACAAGAACCAGCAGTAGTAATGCATCAAACT ACATATCATAAGTCAGAGGAACAACAGCAACTCTCCGACGTGTGGCGCGAAATCCACGGCGAGAATGAATGGGCCGGGCT TCTAGACCCCATGGACAAGACACTACGGCAGGAGCTGATCCGCTACGGGGAGATGGCTCAGGCCTGCTACGACGCCTTCG ACTTCGACCCTTTCTCTAAGTACTGCGGGAGCTGCCGCTTCACCCGCGGCAACTTCTTCAACTCCCTTGGCATGAGTGAC CACGGCTACACCGTCACGCGCTACCTCTACGCCACCGCCAACATCGACCTCCCCAAATTCTTCAAGCAGTCTCGCTGGCC CAAGATGTGGAGCAAGCACGCCAACTGGGCTGGGTATGTTGCTGTCTCGGACGACGCCACCTCCCGCCGCCTCGGCCGCA GGGACATCACCGTGGCATGGCGCGGCACCGTCACGTACCTTGAGTGGGTGGTGGACCTCATGGATTTCCTCATACCCATC TCCTCCCAGTCCATCCCCTGCCCTGATCAAACAGTTAAGGTGGAATCTGGGTTCTTGGAGCTTTACACCGACAAAGAACA AGACTGCAGTTACTCCAAGTACTCGGCAAGGGAACAAGTTCTTTCAGAGGTGAAGAGGTTGATGGAGATCTACCATGATG AGGAGCTCAGCATCACCATCACGGGACACAGTTTGGGGAGCGCATTGGCTATTTTGAGCGCCTATGACATCGCTGAAACA GGGCTAAACATGAAGAGGGATAACAGCATTGTTCCAGTTTCCGTGATGTCATTTTCAGGTCCGAGGGTTGGGAATGCGAG GTTCAAGGAGAGGTTGGAAATGTTGGGGGTGAAGGTGTTGAGGGTGGTGAATGTACATGATTTGGTGCCCAAAACGCCAG GGTTTCTGTTCAATGAACATAGGCCGCTGGCAGTGATGAAGATTGCGGAGGCTTTGCCTTGGAGTTATTCACATGTTGGG GAAGAGTTGGTGTTAGACCATAAGAACTCGCCTTTCCTAAAGCCTGATGCCGATGCTGTATGTGCCCATAACTTGGAGGT TCTTTTGCATTTAATTGACGGATACCACGGAAAGGGGCAGAGGTTCATCCTATCAACTGGTAGAGACCCTGCTTTGGTGA ACAAGGCCTGTGATTGCTTAAAAGACCATTACTTGGTTCCACCACACTGGAGGCAAGATGAGAATAAGGGCATGATCAGA GGCAATGATGGACGCTGGGTGCAGCCTGAACGACCAAAACTTGACGATCATCCTGAAGATATGCTTCACCATCTCAGGCA ACTAGGTCTCACTTCATCTGATATTTGA
Protein sequence (LotjaGi5g1v0175000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAASSSISHMLIPSPKTHQPISFRSKLNPTPPPSLPQNQKSTKLIVHSKSSLSMSPTTTTSELHREQQHQQEPAVVMHQT TYHKSEEQQQLSDVWREIHGENEWAGLLDPMDKTLRQELIRYGEMAQACYDAFDFDPFSKYCGSCRFTRGNFFNSLGMSD HGYTVTRYLYATANIDLPKFFKQSRWPKMWSKHANWAGYVAVSDDATSRRLGRRDITVAWRGTVTYLEWVVDLMDFLIPI SSQSIPCPDQTVKVESGFLELYTDKEQDCSYSKYSAREQVLSEVKRLMEIYHDEELSITITGHSLGSALAILSAYDIAET GLNMKRDNSIVPVSVMSFSGPRVGNARFKERLEMLGVKVLRVVNVHDLVPKTPGFLFNEHRPLAVMKIAEALPWSYSHVG EELVLDHKNSPFLKPDADAVCAHNLEVLLHLIDGYHGKGQRFILSTGRDPALVNKACDCLKDHYLVPPHWRQDENKGMIR GNDGRWVQPERPKLDDHPEDMLHHLRQLGLTSSDI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 25 | 25 | - | – | |
| MobiDBLite | 1 | 41 | 41 | - | – | |
| PANTHER | 34 | 508 | 475 | 3.0E-249 | – | |
| PANTHER | 34 | 508 | 475 | 3.0E-249 | – | |
| Gene3D | 91 | 502 | 412 | 8.2E-160 | – | |
| SUPERFAMILY | 114 | 436 | 323 | 4.18E-35 | ||
| CDD | 149 | 409 | 261 | 3.4149E-49 | – | |
| Pfam | 218 | 375 | 158 | 4.3E-37 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Lipid metabolic process | The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. |
Expression pattern of LotjaGi5g1v0175000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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