Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0182800 |
| Transcript ID | LotjaGi5g1v0182800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant/T32M21-140 protein; TAIR: AT3G23160.1 plant/protein (DUF668); Swiss-Prot: sp|Q9BZF9|UACA_HUMAN Uveal autoantigen with coiled-coil domains and ankyrin repeats; TrEMBL-Plants: tr|A0A0B2QR89|A0A0B2QR89_GLYSO Uncharacterized protein; Found in the gene: LotjaGi5g1v0182800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:46543203..46546435) extracted from Lotus japonicus Gifu genome v1.2.
ATTGACTATCCATAAACAACCTGTCTCTTTCTTTCTTTCTTATACACCTTCTTTGCATTGTTATTAACTTCCAAACTTCA ATGGGGGCTAGTTCTTTTACCCAAAAAAGAACCCCATGATGACACTGCAAAAAGCCAAAAGAAATTCAAAAGCACTTAAC ATGGTTCTGAGTCAACTTTTCAAAATTCTGATCCAATTTTTGAAAAGTAGAGCAGATAGGTCTCATTTCTAAAACTGCAA CACAAAGACCAAAACCAAACCATCGTCACCTTCCTTCCTTCAATGGTCCCTACATCATACATCTCTCTTGTTGTTTAGTT CTTTCCTTCCCTCCATTTTCTCTATTGCGCTTCATATTCAATTTCCACCTCAAACTGTTTATGCCCACCACTTTTGAACT TCTCCACTAGCCTTTGGTTTTTTATGCATGCCCACTAACCAATTTCATTCCCAAAAGCTTAGTTGACCATGAAAGTTTCA AGCTTTGACAACCCTTTGAGCTTTTCTTCTTATCTCGCTTGATGGGTCTTGTCTTGTGATTTTGCTCACAGGGTCTTTTG TGGTGTTTGAGCTTCATGGGGTTTCAGAGTTGAGCTCTGGTTTCTCGAAAGCTTGCACCTTTGAGCTGATTGAAGCCTCT ATCTAGCTCATTGGGTTCTTTCCTTTTTGGGTACCCTTGAGTCTAGATTTGAATTTTGGTGAAAGTGGGAGCTATGGTTG CTGAAGCTTGGATTGTGAAGATGGGTAGGCAGGTGAGTGCTAATCTCAAGCATGCCCTTCTTCTTGAGCCTTCTGCAAAG AGAAAACAGGGTCCTAAAAGACAAGACAACAAGGTAATGATCGAAATTCTGTCTTTTGAAGTAGCAAATGTGATGTCAAA AATTGTTCACCTTCACAAGTCCTTGTCAGAGTCTGAGATTACAAAGCTCAGGAATGAGATCTTGAACTCAGAGGGTGTTA GAAACCTTGTTTCCTCTGAGGAGGCTTATCTTCTTGAGCTTGCTCGAGCAGAGAAGCTTGAGGAGTTGAACCGTGTTGCT AGTGTGGTTTCTAGGTTGGGGAAGAAGTGCTCTGTGCCTGCATTGCAGGGTTTTGAGCATGTTTATGGGGACATTGTTGG TGGGGTTATTGATGTGAAGGAATTGGGTTTCTTAGTTAAGCATATGGAAGGAATGGTGAGGAAACTGGATAGGTATGTTA GCACCACCAGGAATTTGTACAGGGAAATGGAGGTCTTGAATCAATTGGAGCAAGCGGTGAAGAAGCTTCAGCATAGCCAG CACGAGGAGAGTAGAAGGGCGTTCGAGCAGAAACTCGCGTGGCAAAAGCAAGATGTGAGGCATCTGAAGGAGATATCACT CTGGAATCAGACCTTTGATAAGGTTGTTGAGTTGTTGGCCAGGACAGTTTGTACCATTTATGCTAGGATCTGTATGATTT TTGGTGATTCTGCTGGGAGGAAGCATAGCCTTGGGCTTGGTGGAGGTTCACCACCAATGCAAAATGAATGTGGATTGATG TCTCCCGGGATTGATTTTCAGATGACTTCGGACAAGTTGAAACGCAATCGTAGCAAGAAAAATGGTTACCAATTGAGTTC AACTAGGAGAGTTGCTGCTGAGACAAGGGGAGCTATTAGTAGGACTCATATAGATTTGAGGAGAGAAGAGTTAGCATATC TGCAATTCGAAGATCTTGGTTTTCCATGTGGTACAAGTCCAGGGAGACTTTTCATGGAATGTCTAAGTTTAAGTAGCTCA GTTTCGAATTTTGGTGATGACGACGATGGTGGTGGTTATGTTATTGATCACGAGGAACAATTTTGTCAAATTCCTGGAAT TGGTAATAGTGTGAAGAAAAGGGAGACCATGTGCCTTTCTGGTGGTCTAAATCATGCTCAAACTGTCGTTCCTTCCACTG CTGGAGATCCAAGACAAGTCAGGTCCGGTGTTCAAAGTTGCTCAGCATTCGGTCCCAAGAGCGGATTAGCTGTTTATGCT CCTCCTTCCACTCTTGGAGGCTGTGCTCTTGCATTGCACTATGCCAATGTCATCATTGTCATAGAAAAATTGCTTAGCTA TTCACATTTAGTTGGGGATGAAGCTAGGGATGATCTATATCAGATGCTTCCGACGAGCTTAAGGTTATCTCTGAAGGCTA AACTCAGGACCTATGTCAAGAACTTGGCCATATATGACGCCCCTCTCGCCCATGAGTGGAAGGTGAAGCTTGACTCGATA CTTAGGTGGCTTTCTCCACTTGCGCATAGTATGATCAGATGGCAAAGTGAAAGGAATTTCGAGCAACACCAAATCGTTAG CAAGACTAATGTGCTGCTATTTCAGACATTATACTTTGCTGATAGGGGAAAGACAGAGGATGCTATGTGTGAGCTTCTTA TCGGATTGAATTACATATGTCGCTACGAACAACAACAAAATGCTTTACTGGGTTGTGCAAGCAGTTTTGATTTTGAAGAT TGCATGCGGCGGCAATTGCGGTGTGGTGCATCTTTTCTCAATTGAATACAGTCTTGATGTTGTAATCTTCAAAATGGTGA GCATTTCCTTAATTATACTACCATAGAAGTCATCATTTTGATACAACATGAAGTTCTGAACTTTGTACATTGAGGACTAA CATTGTTGAAGATTTGGATAGTGTAGTAGTATTCAATTGCAATTGTACTCATGCTGAATTTGTACTCATCAAGTATATAA GCAGTGAAATCTATAAAATGGGCAGAAAAGTTCATGCTGAATTTGTTAATATGTTTATGAAGCTCTCTTGTTGCTTGGAG TATGCTTTGTTAAAACCATTGTTTGAATATGACAGACTAGAATTGATATCTATGATTCATGGGTACTTCATTTGGCTGCT GTACATGTACCCGGTACTGGTACTTGTTGGATATTTCTTGGGTAGACAACTAGGCATCAACCAAAACTAAATTTTTTTTC AGCTTTTATTCCTTTCAGGAACAAAAATAAAACCCCTCCTTGTAACATGTACGATCAATTTACATTAATGCATTATGTTC CCTGGTTGATGTTCGCTTACATTGGATAAGTTACTAAATTCAAGTTTTCTTTCTTGCATCATGCACAAATCTCAATTTTT CCAATATGCTTAGTTAGTTTTGACAACAATGTATATTTTAATTTATTATTGTAAAGTTTTATGCTAGTTTGTTGAAAATA TAATCTCTTTTGATATATATAAGCGTACTGTAC
CDS sequence (LotjaGi5g1v0182800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGCTGAAGCTTGGATTGTGAAGATGGGTAGGCAGGTGAGTGCTAATCTCAAGCATGCCCTTCTTCTTGAGCCTTC TGCAAAGAGAAAACAGGGTCCTAAAAGACAAGACAACAAGGTAATGATCGAAATTCTGTCTTTTGAAGTAGCAAATGTGA TGTCAAAAATTGTTCACCTTCACAAGTCCTTGTCAGAGTCTGAGATTACAAAGCTCAGGAATGAGATCTTGAACTCAGAG GGTGTTAGAAACCTTGTTTCCTCTGAGGAGGCTTATCTTCTTGAGCTTGCTCGAGCAGAGAAGCTTGAGGAGTTGAACCG TGTTGCTAGTGTGGTTTCTAGGTTGGGGAAGAAGTGCTCTGTGCCTGCATTGCAGGGTTTTGAGCATGTTTATGGGGACA TTGTTGGTGGGGTTATTGATGTGAAGGAATTGGGTTTCTTAGTTAAGCATATGGAAGGAATGGTGAGGAAACTGGATAGG TATGTTAGCACCACCAGGAATTTGTACAGGGAAATGGAGGTCTTGAATCAATTGGAGCAAGCGGTGAAGAAGCTTCAGCA TAGCCAGCACGAGGAGAGTAGAAGGGCGTTCGAGCAGAAACTCGCGTGGCAAAAGCAAGATGTGAGGCATCTGAAGGAGA TATCACTCTGGAATCAGACCTTTGATAAGGTTGTTGAGTTGTTGGCCAGGACAGTTTGTACCATTTATGCTAGGATCTGT ATGATTTTTGGTGATTCTGCTGGGAGGAAGCATAGCCTTGGGCTTGGTGGAGGTTCACCACCAATGCAAAATGAATGTGG ATTGATGTCTCCCGGGATTGATTTTCAGATGACTTCGGACAAGTTGAAACGCAATCGTAGCAAGAAAAATGGTTACCAAT TGAGTTCAACTAGGAGAGTTGCTGCTGAGACAAGGGGAGCTATTAGTAGGACTCATATAGATTTGAGGAGAGAAGAGTTA GCATATCTGCAATTCGAAGATCTTGGTTTTCCATGTGGTACAAGTCCAGGGAGACTTTTCATGGAATGTCTAAGTTTAAG TAGCTCAGTTTCGAATTTTGGTGATGACGACGATGGTGGTGGTTATGTTATTGATCACGAGGAACAATTTTGTCAAATTC CTGGAATTGGTAATAGTGTGAAGAAAAGGGAGACCATGTGCCTTTCTGGTGGTCTAAATCATGCTCAAACTGTCGTTCCT TCCACTGCTGGAGATCCAAGACAAGTCAGGTCCGGTGTTCAAAGTTGCTCAGCATTCGGTCCCAAGAGCGGATTAGCTGT TTATGCTCCTCCTTCCACTCTTGGAGGCTGTGCTCTTGCATTGCACTATGCCAATGTCATCATTGTCATAGAAAAATTGC TTAGCTATTCACATTTAGTTGGGGATGAAGCTAGGGATGATCTATATCAGATGCTTCCGACGAGCTTAAGGTTATCTCTG AAGGCTAAACTCAGGACCTATGTCAAGAACTTGGCCATATATGACGCCCCTCTCGCCCATGAGTGGAAGGTGAAGCTTGA CTCGATACTTAGGTGGCTTTCTCCACTTGCGCATAGTATGATCAGATGGCAAAGTGAAAGGAATTTCGAGCAACACCAAA TCGTTAGCAAGACTAATGTGCTGCTATTTCAGACATTATACTTTGCTGATAGGGGAAAGACAGAGGATGCTATGTGTGAG CTTCTTATCGGATTGAATTACATATGTCGCTACGAACAACAACAAAATGCTTTACTGGGTTGTGCAAGCAGTTTTGATTT TGAAGATTGCATGCGGCGGCAATTGCGGTGTGGTGCATCTTTTCTCAATTGA
Protein sequence (LotjaGi5g1v0182800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVAEAWIVKMGRQVSANLKHALLLEPSAKRKQGPKRQDNKVMIEILSFEVANVMSKIVHLHKSLSESEITKLRNEILNSE GVRNLVSSEEAYLLELARAEKLEELNRVASVVSRLGKKCSVPALQGFEHVYGDIVGGVIDVKELGFLVKHMEGMVRKLDR YVSTTRNLYREMEVLNQLEQAVKKLQHSQHEESRRAFEQKLAWQKQDVRHLKEISLWNQTFDKVVELLARTVCTIYARIC MIFGDSAGRKHSLGLGGGSPPMQNECGLMSPGIDFQMTSDKLKRNRSKKNGYQLSSTRRVAAETRGAISRTHIDLRREEL AYLQFEDLGFPCGTSPGRLFMECLSLSSSVSNFGDDDDGGGYVIDHEEQFCQIPGIGNSVKKRETMCLSGGLNHAQTVVP STAGDPRQVRSGVQSCSAFGPKSGLAVYAPPSTLGGCALALHYANVIIVIEKLLSYSHLVGDEARDDLYQMLPTSLRLSL KAKLRTYVKNLAIYDAPLAHEWKVKLDSILRWLSPLAHSMIRWQSERNFEQHQIVSKTNVLLFQTLYFADRGKTEDAMCE LLIGLNYICRYEQQQNALLGCASSFDFEDCMRRQLRCGASFLN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 595 | 595 | 0.0 | – | |
| PANTHER | 1 | 595 | 595 | 0.0 | – | |
| Pfam | 45 | 101 | 57 | 8.3E-26 | ||
| Coils | 175 | 195 | 21 | - | – | |
| Pfam | 433 | 522 | 90 | 6.7E-32 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0182800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…