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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0184800 |
| Transcript ID | LotjaGi5g1v0184800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Repetitive proline-rich cell wall protein 2; TAIR: AT3G22142.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Swiss-Prot: sp|Q40375|PRP2_MEDTR Repetitive proline-rich cell wall protein 2; TrEMBL-Plants: tr|A0A1J7I059|A0A1J7I059_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0184800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:47091090..47093663) extracted from Lotus japonicus Gifu genome v1.2.
GATTGATGTCAGACTCAAAAATCACACCTACCTTCTTTTGACTTCAGGTGGAGATATTTTTTATTATGTATAAAAAAACT AAGGAACCTCGAGAGCAAAAGGCCCCATGCCCTTCCCTATAAATAGTTTCTCATGGTTTTCATTTTCATCCATCACAACC TGAGACATGATCTCTATACAACTAGTGTTGCTCCTGCTAGGAGTGGTGAGCATCACCACTCCTCCAGTGTTGGCTAATTA TCGACGCACACTTCATGAGCCTACACCAATTGAGACACCACCCCCAATCTACCCACCACCAGTGTTCCACCACCCTCCAT ATGTAAAGCCACCACCGGTGTATCAGCAACCGCCTCATGAGAAACCACCACCAGTGTACAAACCACCGTATGAAAACCCG CCGCCAGAGTACGAGCCTCCCCCTCATGAAAAAACACCACCAGTATACCAGCCTCCACCACCTGAGGAGCTACCGCCAGT GTACCAACCTCCACCACATGAAAAACCACCTTATGAGAAACCGCCTCATGAAAAGCCACCATATGAGAAGCCACCACCAC ATGAGAAACCACCACATGAGGAGCCACCACCACTCTACCAGCCTCCACCACATGAGAAACCACCACATGTGGAGCCACCA CCCCTATACCATCCTCCACCGCATGAGAAGCCACCTCATGAGAAGCCACCACACGAGGAGCCACCACCATTGTACCAGCC TCCACCCCATGAGAAACCACCACATGAGGAGCCACCTCCAGTGTACCATCCTCCACCGCATGGGGAACCACCTTATGAGA AACCACCTCATGAGAAGCCACCAGAGCCACCACTGTACAAGCCTCCACCACATGAGAAACCACCACATGAAGAGCCACCA CTAGTGTACCATCCTCCACCGCATGAGAAACCCCCTTATGAGAAACCACCTCATGAGAAGCCACCACAAGAGAAACCACC ACCATTGTACCAACCTCCACCACATGAGAAACCACCCCATGAGGAGCCACCGCCAGTGTACCACCCTCCACCTCATGAGA AACCACCACATGAAGAGCCACCACCATTGTACGAGCCTCCACCACATGAGGAGCCACCACCACTGTACCACCCTCCACCG CATGAGAAACCACCTTATGAGAAACCACCTCATGAGAAGCCACCTCATGAAAAACCACCATATGAGGAGCCACCACCAGT GTACCAGCCACCACCGCATGAGAAACTACCCCATGAGGAGCCACCACCAGTGTACCGTCAACCACCACATGAGGAACCGA CACCAGTGTACCATCCTCCACCGTATGAAAAACCACCACATGAGAAGCCACCTTATGAGAAACCACCACTTGAGAAGCCA CCACATGAGGAGCCACCACATGAAAAGCCGCCACATGAGGTGCCACCACCAGTTTACCAACCTCCACCGCATGAGAAACC ACCCCATGAGAAGCCACCCTATGAGAAACCACCTCATGAGAAGCCACCTTATGTGAAGCCGCCGCCAATCTACCAACCTC CTCCACATAAGAGCCCACCAATTAAGAAGCCTCCAACTCATGAGCCACCATATGGGCAACCACCACATGTGAAGCCACCA CCAGTCCACCAACCTCCACCGTATGAGAACCCCCCACCAGTGCATCCGCCTCCTACACATCAGAAGCCATCACCAGGATA CCAACCGCCTCATGTGAAACCACCACATATTGCGCCACCACATGAAAAAACACCACCCAAATACCAACCACCTCATGAGA AGCCACCCTTTGAGAAGCCACCACTTGAGAAACCACCCCATGAAAAGCCACCACCAGAGTACCAACCTCCTCATAAGAAG CCACCATCACAGTACCAACCACCACCAGAGTACGAACCTCCTCAGGAAAAACCACCACCTGTGTACCTACCCCCATATTG GAAACCACCACCTGCGTATCCACCTCCATATGAGAAACCACCACCAGAGTATGAACCGCCTCAAGAAAAACCACCACCAG TGTATTCGCCTCCATATGAAAGGCCACCCACAGGGCATCCGACTCCTTACCCACCATTTTATCACCTACCACCTGTGTAT CACCCCCCTTACGAGAAGCCGCCACCACTATACCAACCTCCTCATGAGAAACCACCCATTTACGAACCTCCCCATGAGAA ACCACCCATTTATGAACCTCCTCACGAGAAACCACCACTTTATGAACCACCTCCAGGATACAACCCTCCACCATATGGTC ACTATCCACCGTCTAAAAATTAATGACAACTACTAGTGAAGAACGTGGCAATGTGGCATGCATGTTTTGGTTAACCAAAA GCAAGAGCAGTTCGTTTGTCACATAAATTTTCACTTTGTTTTTAATTTGATTCATGTTTAGGAAGCACTTTTAAGATGGG GAGTACAATACTCCACTTCTGCAATGGTTTGTAAAAATAAGGGCTCTCAATGCCTCTGTGTGTAATAATACCTTTCATTT CCGTTTCAGCAATGATATTGTAATAATGTGAATTACTTTGGTTTATCTACTGTTACAAAATCTATCTCATTAGAAAATTA ATGATGCCAAACTT
CDS sequence (LotjaGi5g1v0184800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCTCTATACAACTAGTGTTGCTCCTGCTAGGAGTGGTGAGCATCACCACTCCTCCAGTGTTGGCTAATTATCGACG CACACTTCATGAGCCTACACCAATTGAGACACCACCCCCAATCTACCCACCACCAGTGTTCCACCACCCTCCATATGTAA AGCCACCACCGGTGTATCAGCAACCGCCTCATGAGAAACCACCACCAGTGTACAAACCACCGTATGAAAACCCGCCGCCA GAGTACGAGCCTCCCCCTCATGAAAAAACACCACCAGTATACCAGCCTCCACCACCTGAGGAGCTACCGCCAGTGTACCA ACCTCCACCACATGAAAAACCACCTTATGAGAAACCGCCTCATGAAAAGCCACCATATGAGAAGCCACCACCACATGAGA AACCACCACATGAGGAGCCACCACCACTCTACCAGCCTCCACCACATGAGAAACCACCACATGTGGAGCCACCACCCCTA TACCATCCTCCACCGCATGAGAAGCCACCTCATGAGAAGCCACCACACGAGGAGCCACCACCATTGTACCAGCCTCCACC CCATGAGAAACCACCACATGAGGAGCCACCTCCAGTGTACCATCCTCCACCGCATGGGGAACCACCTTATGAGAAACCAC CTCATGAGAAGCCACCAGAGCCACCACTGTACAAGCCTCCACCACATGAGAAACCACCACATGAAGAGCCACCACTAGTG TACCATCCTCCACCGCATGAGAAACCCCCTTATGAGAAACCACCTCATGAGAAGCCACCACAAGAGAAACCACCACCATT GTACCAACCTCCACCACATGAGAAACCACCCCATGAGGAGCCACCGCCAGTGTACCACCCTCCACCTCATGAGAAACCAC CACATGAAGAGCCACCACCATTGTACGAGCCTCCACCACATGAGGAGCCACCACCACTGTACCACCCTCCACCGCATGAG AAACCACCTTATGAGAAACCACCTCATGAGAAGCCACCTCATGAAAAACCACCATATGAGGAGCCACCACCAGTGTACCA GCCACCACCGCATGAGAAACTACCCCATGAGGAGCCACCACCAGTGTACCGTCAACCACCACATGAGGAACCGACACCAG TGTACCATCCTCCACCGTATGAAAAACCACCACATGAGAAGCCACCTTATGAGAAACCACCACTTGAGAAGCCACCACAT GAGGAGCCACCACATGAAAAGCCGCCACATGAGGTGCCACCACCAGTTTACCAACCTCCACCGCATGAGAAACCACCCCA TGAGAAGCCACCCTATGAGAAACCACCTCATGAGAAGCCACCTTATGTGAAGCCGCCGCCAATCTACCAACCTCCTCCAC ATAAGAGCCCACCAATTAAGAAGCCTCCAACTCATGAGCCACCATATGGGCAACCACCACATGTGAAGCCACCACCAGTC CACCAACCTCCACCGTATGAGAACCCCCCACCAGTGCATCCGCCTCCTACACATCAGAAGCCATCACCAGGATACCAACC GCCTCATGTGAAACCACCACATATTGCGCCACCACATGAAAAAACACCACCCAAATACCAACCACCTCATGAGAAGCCAC CCTTTGAGAAGCCACCACTTGAGAAACCACCCCATGAAAAGCCACCACCAGAGTACCAACCTCCTCATAAGAAGCCACCA TCACAGTACCAACCACCACCAGAGTACGAACCTCCTCAGGAAAAACCACCACCTGTGTACCTACCCCCATATTGGAAACC ACCACCTGCGTATCCACCTCCATATGAGAAACCACCACCAGAGTATGAACCGCCTCAAGAAAAACCACCACCAGTGTATT CGCCTCCATATGAAAGGCCACCCACAGGGCATCCGACTCCTTACCCACCATTTTATCACCTACCACCTGTGTATCACCCC CCTTACGAGAAGCCGCCACCACTATACCAACCTCCTCATGAGAAACCACCCATTTACGAACCTCCCCATGAGAAACCACC CATTTATGAACCTCCTCACGAGAAACCACCACTTTATGAACCACCTCCAGGATACAACCCTCCACCATATGGTCACTATC CACCGTCTAAAAATTAA
Protein sequence (LotjaGi5g1v0184800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
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
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 23 | 23 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| PANTHER | 5 | 317 | 313 | 1.2E-139 | – | |
| PANTHER | 5 | 317 | 313 | 1.2E-139 | ||
| Phobius | 16 | 23 | 8 | - | – | |
| Phobius | 24 | 698 | 675 | - | – | |
| PRINTS | 31 | 47 | 17 | 4.0E-9 | – | |
| MobiDBLite | 53 | 113 | 61 | - | – | |
| MobiDBLite | 53 | 581 | 529 | - | – | |
| PRINTS | 66 | 78 | 13 | 4.0E-9 | – | |
| PRINTS | 80 | 101 | 22 | 4.0E-9 | – | |
| PRINTS | 104 | 120 | 17 | 4.0E-9 | – | |
| MobiDBLite | 114 | 139 | 26 | - | – | |
| MobiDBLite | 140 | 164 | 25 | - | – | |
| PANTHER | 191 | 353 | 163 | 1.2E-139 | ||
| PANTHER | 191 | 353 | 163 | 1.2E-139 | – | |
| MobiDBLite | 208 | 260 | 53 | - | – | |
| MobiDBLite | 273 | 303 | 31 | - | – | |
| PANTHER | 287 | 446 | 160 | 1.2E-139 | ||
| PANTHER | 287 | 446 | 160 | 1.2E-139 | – | |
| MobiDBLite | 313 | 338 | 26 | - | – | |
| MobiDBLite | 365 | 379 | 15 | - | – | |
| MobiDBLite | 380 | 409 | 30 | - | – | |
| MobiDBLite | 422 | 440 | 19 | - | – | |
| PANTHER | 433 | 595 | 163 | 1.2E-139 | – | |
| PANTHER | 433 | 595 | 163 | 1.2E-139 | ||
| MobiDBLite | 441 | 513 | 73 | - | – | |
| PANTHER | 479 | 628 | 150 | 1.2E-139 | ||
| PANTHER | 479 | 628 | 150 | 1.2E-139 | – | |
| MobiDBLite | 514 | 553 | 40 | - | – | |
| MobiDBLite | 554 | 581 | 28 | - | – | |
| PANTHER | 586 | 681 | 96 | 1.2E-139 | – | |
| PANTHER | 586 | 681 | 96 | 1.2E-139 | ||
| MobiDBLite | 595 | 630 | 36 | - | – | |
| PANTHER | 627 | 697 | 71 | 1.2E-139 | – | |
| PANTHER | 627 | 697 | 71 | 1.2E-139 | ||
| MobiDBLite | 643 | 698 | 56 | - | – | |
| MobiDBLite | 657 | 671 | 15 | - | – | |
| MobiDBLite | 672 | 698 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0184800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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