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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0193900 |
| Transcript ID | LotjaGi5g1v0193900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methyltransferase; TAIR: AT3G63410.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|P23525|IN37_SPIOL 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic; TrEMBL-Plants: tr|A0A072VMH0|A0A072VMH0_MEDTR 2-methyl-6-phytylbenzoquinone methyltransferase; Found in the gene: LotjaGi5g1v0193900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:48838078..48840853) extracted from Lotus japonicus Gifu genome v1.2.
GAACTTGCTGCGTGAACGGTGTGGGACTTAATCTGTGACAAACAAAAATACTATTGAGCGTTGTATAGTTGGTTGCTGTT ATCATGAAGAACCTTTGTTTAACTTCATTCAGGAACTATATCATCTCCATGATTGAGTACTCTATAGAAACTTACAGCTA GCAGTGGCAGCAACGGATTTGTCTACTTCCAACAGCCTAATTTTTCATGATTGAGTACTCTAATATATTTTTCATTAAAT TGCCTTCTAGTCTGTTACTATATAGAACAAAAGAGCCACAACTTACAAGCACCAACTAGTACCACAAGAAAAACTAATCA GCTCTACTTTATCTTATGTGGTGCATATCCACTTACATATTGCAACAGCACCAAGTTCTGTGTCTTTATCTCTCACTGCA TAATCCGGAATAAGCCCTATCATTTTCCAAGTCACCTTCAAATTCCAAACAATCCTTGTCTTTTTTCTATGATTTAAACT GTCAAAAAATAAATGATATACAAAGTGTTACTCCATGGTAGATTAGAATCTTAGAAGTTCTGCAACTTTTCTCCTTGCTG TCTCTCCATGGCCTCATTAATGCTTAGTGGTGCTGAAAATACAAAGCTTATTAGTGGCATAGCTCCATCTGGGTTAGGCT CAGTGGGACTTAGCTTTCACAAGAGCTGCTTCTTCAAGAAAAGTGTAGTATCTTATGGTAACAAGTACAGGGCAAGAACC TTGACACCCAGATGCAGCGTCTCATCTTTCAGGCCTGCTTCACAACCTAGATTCATCCAACACAAGAAGGAGGCATTTTG GTTCTACAGGTTTTTGTCAATTGTGTATGATCATGTCATAAATCCAGGGCATTGGACAGAGGACATGAGAGATGAGGCAC TTGAGCCTGCTGATCTTTTCGACCGCAATATGCGAGTGGTGGATGTAGGGGGAGGAACTGGGTTCACCACTCTTGGGATA GTGAAGCATGTGGATGCTAAAAATGTGACAATTCTTGACCAGTCTCCTCACCAGCTTGCTAAGGCTAAGAAGAAGGAACC TTTGAAAGAATGCAAGGTCATTGAAGGAGATGCGGAAGATCTGCCATTTCCAACTGATTATGCTGAAAGATATGTTTCTG CCGGAAGGTACTAAATTAAGATTTGGGCTGTGGTTATCTTAGTGACTTGATTCAGTGCATGTTTGACAATTCTTCTATAA TTGATTTCGAAGTCAAATTAATCATAGGAAGAAGCTTTTGTCAGTAAATTCTGAGTGTTAGAATTGATTCTAAGGAAATA GAAGTTGATCCAAACATCTTTAAGCATGGGTTTGGACCTCAAATACGAAAAATTGTAGGCAAATTGATGTGAATTTTGCA TTTAAACTGATGTGTAGTTTTAATTAAATATAACATTGGATAGCCAAGATAGCAGATAAATGTCAAACCATAACTTAATA TGATCATTAGACTGGAAAAATTTACAAATTAACCTTCATGAATCATGATTATGACCATCTTTTATGGTAACTATATGCTA AACTTCTTGATCATTAGCAAGAAAAAAATGACTTCATAGTGATATGTCAGCTCTTAGCATCTTATACAAAAGTGGCTAAT GTTGTCCATGTTTCCTTTATAACTCTCTTCTTTTATGACATATGATTTTGTTGTTCAGTATTGAATACTGGCCTGACCCA CAGCGTGGCATTAAGGAAGCATACAGAGTGCTGAGAATAGGAGGCAAAGCATGTATCATAGGTCCTGTATACCCAACTTT CTGGTTGTCTCGGTTCTTCGCCGACATGTGGATGCTCTTCCCCAAGGAGGAGGAGTATATTGAGTGGTTTAAAAAGGCTG GTTTCAAAGATGTCAAGCTGAAAAGGATAGGTCCGAAATGGTATCGCGGTGTGCGGCGGCATGGCCTCATCATGGGTTGC TCTGTGACTGGTGTTAAGCCTTTATCTGGGGACTCTCCCCTCAAGGTAATGTATACATTATTCTCAATATACACTTTTGA TATCAAAATTCATTGATCACTGGTCCTCCTTGACCATTTTAGGCAATGTGAGACTTCTCTTAAGATGTTATAAACAATGG ATACAATAACTCAATTTTCACCAAGAAGCATTTATACTCAGTTTTGAAGCTTGTTTTCCTTACTTTTAGTAACTTTTGAA ATGTGGTTATGCATGTCTTTATGCAGCTTGGTCCTAAGGTAGAAGATGTGGAGAAGCCAGTAAATCCATTGTTGTTTCTC TCGAGGCTTATTCTTGGTGCAATTGCAGCCACTTACTATGTACTGGTCCCAATTTACATGTGGATCAAGGACCAAATTGT CCCAAAGGGCATGCCAATCTGAGATTGGAGAATGATAGTCAAATTTTGGACCTGTGTGCATCTCTAAAATAACTGTGATG GTAACATGATTTTTCCTTGCATCTTTCCATCTTGGCCACATATTAGGGAAGAGTTGCTTTAGGATGACATTGTTACTCCA AAACCATTAGCTTTGGTTTGTGGTAGCTAACTTCAATTGTTTAGTTGGAAGATATGTCAAGTTTATGAGTACGCCTATAG CAGATATGTCAAGTTTGATTTGTCTATTATATATGCTATCTTGCTTTTAGTACACAAATATTGAAAATGTGCCTGTGGCT TCATTATTCATGAACCATCTAATCATCTATGGAGGAATGAGAAAAATACTGTACTTCAGCTCTTTTGCTCACGGACTAGT CACTAAAGACAGAGTTATGTTCAATGACGAGTGTTTTTACCCGTGCGCTGCACGGC
CDS sequence (LotjaGi5g1v0193900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCTCATTAATGCTTAGTGGTGCTGAAAATACAAAGCTTATTAGTGGCATAGCTCCATCTGGGTTAGGCTCAGTGGG ACTTAGCTTTCACAAGAGCTGCTTCTTCAAGAAAAGTGTAGTATCTTATGGTAACAAGTACAGGGCAAGAACCTTGACAC CCAGATGCAGCGTCTCATCTTTCAGGCCTGCTTCACAACCTAGATTCATCCAACACAAGAAGGAGGCATTTTGGTTCTAC AGGTTTTTGTCAATTGTGTATGATCATGTCATAAATCCAGGGCATTGGACAGAGGACATGAGAGATGAGGCACTTGAGCC TGCTGATCTTTTCGACCGCAATATGCGAGTGGTGGATGTAGGGGGAGGAACTGGGTTCACCACTCTTGGGATAGTGAAGC ATGTGGATGCTAAAAATGTGACAATTCTTGACCAGTCTCCTCACCAGCTTGCTAAGGCTAAGAAGAAGGAACCTTTGAAA GAATGCAAGGTCATTGAAGGAGATGCGGAAGATCTGCCATTTCCAACTGATTATGCTGAAAGATATGTTTCTGCCGGAAG TATTGAATACTGGCCTGACCCACAGCGTGGCATTAAGGAAGCATACAGAGTGCTGAGAATAGGAGGCAAAGCATGTATCA TAGGTCCTGTATACCCAACTTTCTGGTTGTCTCGGTTCTTCGCCGACATGTGGATGCTCTTCCCCAAGGAGGAGGAGTAT ATTGAGTGGTTTAAAAAGGCTGGTTTCAAAGATGTCAAGCTGAAAAGGATAGGTCCGAAATGGTATCGCGGTGTGCGGCG GCATGGCCTCATCATGGGTTGCTCTGTGACTGGTGTTAAGCCTTTATCTGGGGACTCTCCCCTCAAGCTTGGTCCTAAGG TAGAAGATGTGGAGAAGCCAGTAAATCCATTGTTGTTTCTCTCGAGGCTTATTCTTGGTGCAATTGCAGCCACTTACTAT GTACTGGTCCCAATTTACATGTGGATCAAGGACCAAATTGTCCCAAAGGGCATGCCAATCTGA
Protein sequence (LotjaGi5g1v0193900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASLMLSGAENTKLISGIAPSGLGSVGLSFHKSCFFKKSVVSYGNKYRARTLTPRCSVSSFRPASQPRFIQHKKEAFWFY RFLSIVYDHVINPGHWTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKKKEPLK ECKVIEGDAEDLPFPTDYAERYVSAGSIEYWPDPQRGIKEAYRVLRIGGKACIIGPVYPTFWLSRFFADMWMLFPKEEEY IEWFKKAGFKDVKLKRIGPKWYRGVRRHGLIMGCSVTGVKPLSGDSPLKLGPKVEDVEKPVNPLLFLSRLILGAIAATYY VLVPIYMWIKDQIVPKGMPI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 340 | 340 | 2.8E-220 | – | |
| Phobius | 1 | 305 | 305 | - | – | |
| PANTHER | 1 | 340 | 340 | 2.8E-220 | – | |
| ProSiteProfiles | 68 | 277 | 210 | 102.035 | ||
| SUPERFAMILY | 74 | 258 | 185 | 1.43E-37 | ||
| Gene3D | 82 | 270 | 189 | 2.4E-34 | – | |
| CDD | 116 | 214 | 99 | 2.54395E-7 | – | |
| Pfam | 118 | 212 | 95 | 7.5E-16 | ||
| Phobius | 306 | 329 | 24 | - | – | |
| TMHMM | 310 | 329 | 20 | - | – | |
| Phobius | 330 | 340 | 11 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. | ||
| Biological process | Methylation | The process in which a methyl group is covalently attached to a molecule. |
Expression pattern of LotjaGi5g1v0193900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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