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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0194200 |
| Transcript ID | LotjaGi5g1v0194200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF668 family protein; TAIR: AT5G51670.1 hypothetical protein (DUF668); Swiss-Prot: sp|Q8U8J4|NADB_AGRFC L-aspartate oxidase; TrEMBL-Plants: tr|A0A072TFG5|A0A072TFG5_MEDTR DUF3475 domain protein; Found in the gene: LotjaGi5g1v0194200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:48891485..48893579) extracted from Lotus japonicus Gifu genome v1.2.
CACCATATTCAACATGAATTCACGCTGAGTTCAACAGAAATCCAAACAAACCACGATCTACCCTACCACATATTGCATGT GGTCTTAAATACTTTATAGTTTATATATATATACACACTCACCGCTTACCTTCTAGCTCTTGCTTCCTTTGCTCACTTCC TAATAAACACATTCTTCTTCTTCTAGTTATCACTCCCAATCAAACACCCCACGAGCCTCTTCCATCATATTTTCAATCCT TATCTCTCAGCATCAACAAACAAAACCTCCCCACTCTTCAATTATTTCACACACACTCTTTTTTCTCATAGAGACATTTT CACAAACACATAGTGTGCTCTTTCAGAACACGGTGGCCAAGAACCTCAACCACCGCCACCATGGCCCTCGAAACCCTCCT TGTGAAGGTGAAAGCCGCCATCTCAAACACCGTGCACCCGCCGAAGCTCCTCCTGAAGAAGAAGCCATCGTTCAAATCCC GACGAAACGTCGGCGTTTTAGCCTTCGAGATGGCCGGAGTGATGTCGAAGCTTCTCCACCTCTGGCAGTCGCTCTCCGAC GCCACCATCGTCCGCATCCGAAACGACGCCGTCACGCTCGAGGGCGTTCGGAAGATCATCTCCAACGACGAGTCGTTTCT TCTCGGACTCGCCTGCGCCGAGTTCGCCGAGACTCTCCGACTCGCCGCCAACTCGGTCACCCGACTCAGCCACCGCTGCG ATGATCCCAACCTCAGATCCTTCCGTAAAGCCTTCCTCGAGTTCGCCGACTCGGGTCGTGATCCAAACGGGTGGGCCCTC TCCGTTGTGAAGGAAACCGAAGCCAAGCTGAGGAAGATGGAGCGTTTCGTGACGCTCACGGCAGCGCTGCACCGTGAGAT GGAGGAGCTTTCGGTTTTGGAATCTGGGTTGAAGAAAGTTCTTAACCATTACAGTGATCACAGTGAAGCTTCTTCATCTG GGAAAGAGCAGAAGGTGTATGATCTTCAGCAGAAGATTTTCTGGCAGAAACAAGAGGTGAAGGATTTGAAAGAGAGATCC TTATGGGGTAGAAGCTTTGATGGTGTTGTTGTTTTGCTTGTGAGGTTCAGTTTCACTGTTTTGGCAAGGATTAAGGTTGT GTTTGGGATTGGTCACTCTGTGCCATGTTTGTCTAGGAGTTTATCAGCTTCTGCTACTGTTTATCCCACTGATCAGAACC CTGCTAGTGGTTGCAATTTGGCTTCTGGGGCATTGGAAAGGTTAAAGATTGAAGGGAAGGAAAAATTGGGGAGTGGGTTT TTTGAGTCTAACTCTGAGCTTTTGAAGCCACCACCTAGTACATTGGGTGCTGCTGCTTTGGGTTTGCATTATTCCAATTT GATCATTGTGATGGAGAAGATGATTAAGTCACCACATTTGGTTGGTTTGGATGCTAGGGATGATTTGTATGCTATGTTAC CAAGTAGTATAAGGTCAGCTTTGAGGGCTAGGTTGAAAGGGGTGGGGTTTTCTGCTAGTGATCCTGTGCTTGCTGGTGAG TGGAGGGATGCATTGGGGAGGATATTGGGGTGGTTGTCACCATTGGCACATAATATGATCAAGTGGCAGAGTGAAAGGAG CTTTGAGCAGCAAAACTTGGTGCCTAAGACCAATGTGTTGTTGTTGCAAACTTTGTTCTTTGCAAACAAGGAGAAGACAG AGGCTGCTATAACTGAGTTGCTTGTGGGGTTGAACTATATTTGGAGGTTTGAGAGGGAAATGACTGCTAAGGCATTGTTT GAATGTGCTAATTTCAATGGATTGTTAAAGTTGCAAAATCCCAGTTAGTTAATGAGATGGGTTTCTTGATCATTTTTCAT TTTCTTCTTCTGTTATCCTCCATGAATAGGGGTTCTAATTTTGTCTTGAAATTTGATGATGGTTGGTTTTAGATAAATTG AACTAAGTTCAGGTTCTTCAGGGTTTGTTTTTGCTTCTGATTCAGTTCAATGTAAATGGGGTATAGCATCATGTAAATGA TATATTGTGATTTTTTAGTGAAATCTAGATCAAATGCACTGGCTTTCATTATGCATACTTCCCACAATCATGAGAAAATA TTCCTTTTGTTCAAT
CDS sequence (LotjaGi5g1v0194200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCCTCGAAACCCTCCTTGTGAAGGTGAAAGCCGCCATCTCAAACACCGTGCACCCGCCGAAGCTCCTCCTGAAGAA GAAGCCATCGTTCAAATCCCGACGAAACGTCGGCGTTTTAGCCTTCGAGATGGCCGGAGTGATGTCGAAGCTTCTCCACC TCTGGCAGTCGCTCTCCGACGCCACCATCGTCCGCATCCGAAACGACGCCGTCACGCTCGAGGGCGTTCGGAAGATCATC TCCAACGACGAGTCGTTTCTTCTCGGACTCGCCTGCGCCGAGTTCGCCGAGACTCTCCGACTCGCCGCCAACTCGGTCAC CCGACTCAGCCACCGCTGCGATGATCCCAACCTCAGATCCTTCCGTAAAGCCTTCCTCGAGTTCGCCGACTCGGGTCGTG ATCCAAACGGGTGGGCCCTCTCCGTTGTGAAGGAAACCGAAGCCAAGCTGAGGAAGATGGAGCGTTTCGTGACGCTCACG GCAGCGCTGCACCGTGAGATGGAGGAGCTTTCGGTTTTGGAATCTGGGTTGAAGAAAGTTCTTAACCATTACAGTGATCA CAGTGAAGCTTCTTCATCTGGGAAAGAGCAGAAGGTGTATGATCTTCAGCAGAAGATTTTCTGGCAGAAACAAGAGGTGA AGGATTTGAAAGAGAGATCCTTATGGGGTAGAAGCTTTGATGGTGTTGTTGTTTTGCTTGTGAGGTTCAGTTTCACTGTT TTGGCAAGGATTAAGGTTGTGTTTGGGATTGGTCACTCTGTGCCATGTTTGTCTAGGAGTTTATCAGCTTCTGCTACTGT TTATCCCACTGATCAGAACCCTGCTAGTGGTTGCAATTTGGCTTCTGGGGCATTGGAAAGGTTAAAGATTGAAGGGAAGG AAAAATTGGGGAGTGGGTTTTTTGAGTCTAACTCTGAGCTTTTGAAGCCACCACCTAGTACATTGGGTGCTGCTGCTTTG GGTTTGCATTATTCCAATTTGATCATTGTGATGGAGAAGATGATTAAGTCACCACATTTGGTTGGTTTGGATGCTAGGGA TGATTTGTATGCTATGTTACCAAGTAGTATAAGGTCAGCTTTGAGGGCTAGGTTGAAAGGGGTGGGGTTTTCTGCTAGTG ATCCTGTGCTTGCTGGTGAGTGGAGGGATGCATTGGGGAGGATATTGGGGTGGTTGTCACCATTGGCACATAATATGATC AAGTGGCAGAGTGAAAGGAGCTTTGAGCAGCAAAACTTGGTGCCTAAGACCAATGTGTTGTTGTTGCAAACTTTGTTCTT TGCAAACAAGGAGAAGACAGAGGCTGCTATAACTGAGTTGCTTGTGGGGTTGAACTATATTTGGAGGTTTGAGAGGGAAA TGACTGCTAAGGCATTGTTTGAATGTGCTAATTTCAATGGATTGTTAAAGTTGCAAAATCCCAGTTAG
Protein sequence (LotjaGi5g1v0194200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALETLLVKVKAAISNTVHPPKLLLKKKPSFKSRRNVGVLAFEMAGVMSKLLHLWQSLSDATIVRIRNDAVTLEGVRKII SNDESFLLGLACAEFAETLRLAANSVTRLSHRCDDPNLRSFRKAFLEFADSGRDPNGWALSVVKETEAKLRKMERFVTLT AALHREMEELSVLESGLKKVLNHYSDHSEASSSGKEQKVYDLQQKIFWQKQEVKDLKERSLWGRSFDGVVVLLVRFSFTV LARIKVVFGIGHSVPCLSRSLSASATVYPTDQNPASGCNLASGALERLKIEGKEKLGSGFFESNSELLKPPPSTLGAAAL GLHYSNLIIVMEKMIKSPHLVGLDARDDLYAMLPSSIRSALRARLKGVGFSASDPVLAGEWRDALGRILGWLSPLAHNMI KWQSERSFEQQNLVPKTNVLLLQTLFFANKEKTEAAITELLVGLNYIWRFEREMTAKALFECANFNGLLKLQNPS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 467 | 467 | 8.9E-231 | – | |
| PANTHER | 1 | 467 | 467 | 8.9E-231 | – | |
| Pfam | 39 | 94 | 56 | 2.2E-24 | ||
| Pfam | 314 | 401 | 88 | 9.5E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0194200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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