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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0194400 |
| Transcript ID | LotjaGi5g1v0194400.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 65-kDa microtubule-associated-like protein; TAIR: AT5G51600.1 Microtubule associated protein (MAP65/ASE1) family protein; Swiss-Prot: sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3; TrEMBL-Plants: tr|A0A151U5S8|A0A151U5S8_CAJCA Protein regulator of cytokinesis 1; Found in the gene: LotjaGi5g1v0194400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:48927136..48931394) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCTAAACCTCAAGGTGATCCCCTTTCGCAAGCTGAAACAACATGTGGGACGCTTCTGTATGAACTTCAGGTATTCAT TAAATTTTGCTGCAATTATCTTTCCTGCATCCCCCCTGCCAGCTGATGATCCCCTTTTGCAAGCTGAAATTGAATCTGTG TGAATCTCTCATTGTTTCCCTCAACTGATTAGATAATATGGGATGAAGTTGGAGAGTCTGATGCTGACAGAGACAGAATG CTTTATGAGCTTGAACAAGAGTGTCTAGAAGTCTACAGACGGAAGGTAGATGTGGCAAATCGGTCTAGAGCTCAATTAAG GCAGGCAATTGCTGATTGCGAGGCAGAACTTGCAGCTATCTGTTCAGCAATGGGAGAGCGACCTGTACATATTAGGCAGG TTAGATATTTTAAGAATTGCTATAACCTGCTTATTGTTGTTTTAGGGTGTGTCTATGTATCAATGAATGGGGTGGAAAAT GGATTTTTATAACAAGATGGATCACCACCCTAAGTTGACATTAAATTTCCGTTTTCTTGTGTGTTTTCTGCCAAGATAAC AAGTTGACCAGTTAAACTACTAATAAGATTGCACCCCCTGTCTTTCTCATTTTTCTAGGCTGATCAAAATGCTGGAAGCC TGAAAGAAGAGCATGCAAGAATTCTTCCACAGTTGGACGAGATGCGAAAAATGAAGTCTGAGCGTAGAAATCAATTTATT GAAGTTCAAGAGCAGATTCAAAGTCTCTCGATTGAGATTTATGGTCCCATAGAGTATATTCCTGCTACTGTAGATGAAAC AGATTTATCCTTGAGAAAACTTGAAGAATTGCACAGACAACTGAATGCACTTCAAACTGAGAAGGTCAATATACTTCCAT GTCTTTTTTATTGATGATCAACATACATAATTTCTTTCTTGTGCTACGTTAGTATTACTAATTACTAATTATGCTCTTGT CTTGTTATCATGCAGAGTAACCGCCTAAAGAAGGTCCAGGAGCACCAGTACACTTTAAGTTCTCTTTGTTCAGTGCTTGG TTTGGACTTTAAGCAGACAATCAGTGGAATCCATCCCAGTTTAGGAGACTTAGAAGGATCTAAGAGTGTAAGCAATGATA CAATACAGAAATTGGCTGTTGCTGTGCAAGAACTGCGGGAAGTTAAATTACAGAGAATGCAGAAGGTAAAGAATGTTTTA ACAATAAGTTCTGATTAATGATTTAGTTTTCTTTCCTCTGGTTAATGGTTTAAATAACTTATGGTCGGCAGCTCCAAGAT CTTGCTACAACAATGTTGGAGCTCTGGAACTTGATGGATACCCCAGTTGAAGAGCAACAAATGTTTCAGAATGTTACCTG TAATATTGCTGCTTCAGAGCATGAAATAACTGAACCAAACTCCTTGTCCCTGGACTTCATCAATTGTGTGAGTTATAAGT TTATTGAATATAAGGATTATAGTTCATGGTTTAATTTGGTTCATAATCGATCGCTAAAAAAATAATAATGGCATGCAGGC TGAGGCGGAAGTATCTAGGTTAGAAGAGTTCAAATCGAGCAAAATGAAAGAGCTTGTATTGAAGAAGAGAACAGAGCTAG AGGAGATTTGTCGAAAGACTCATTTGGTTCCAGAAGTAGATGGTGCAATTGAATATGTTTTTGAAGCTATAGAATCTGGT AACTTCTATTTTTTATAGTAAGGTATTTCTGGACATGATTGCAATTTTTTTTTTGCAAACTTCAAAGTCTACTTCTTTCT TCTTGATGTAGGATCTGTGGACCCTGCATGTGTGCTTGAACAAATTGAACTTCAGATAGCGCAAGTCAAAGAGGAAGCTT TTGGCCGAAAAGAAATACTTGAGAAGGTTGAGAAATGGTTAGGAGCATGTGATGAAGAGTCTTGGCTTGAGGAGTACAAC AGGGTTAGTTAGTTGAATCCTCCTTCAACGTTGCCAGTTTGACTCCTTTTTTTCATAATCATGATTACAATTTAATAAAT TTACTGCTAATTTTGTTTATCTTTCAGGATGACAATAGATACAATGCTGGGAGAGGTGCTCATCTTACTCTCAAGCGAGC TGAGAAAGCTCGTGCCTTGGTCAACAAAATTCCAGGTATTTGTAGTTCTTAATCATTACCCGTCTTATGGCTCTATGATG TAATACATCAAACTGAATGAAGAACCCTGCATGTAAAGGTGTCAATTTGGATATGAAATGATAGTTCTCAATATTCTGAC TTTGTTTGTGAGTTCCAAAAGCAATTCTAGAGTAATGAACACTAGTTAATCTCTTGATTGATACGACTTTTCGACATTCA ACCTCATTTCTCTTCCAAGCCATCTGGTTGTGCTTCAATCATAAAACTTTTCTTTTTTTTTTCTTCTCTGTCAGTGTGTG TGTATGATTCTAATATGTCTCTCTTTTTGTATATAGCAATGGTTGATGCTTTGACTTCAAAAACTATAACATGGGAAAAG GAAAAAGGCATTGAGTTCATGTATGATGGTGTAAGTACTCCCTGATATGCCTGCCATAATCTTGAGCCATAATGATTTCT TGATTTTTATTTTTATTATTTGCCTAGAGGATTGGATTACTTATTAGTGTCTTTTAGTTGCTCAAGTAAATCTGCTTCAA ACTGATTTCGTCTGTGTTTGGCTTTTTAGATTCGTCTACTGTCCATGCTTGATGAGTACAATATATTACGTGAGGAGAAA GAGCAAGAACGCCGTAGGCAGCGGGTATGGTCCTCTGCATTTAAATACGCACCTCAATTAAATTATGAAGTTATACATCC AATTATTGTCTCTGAGATTGGGTTTTGAAATCTAGGCAACATTTTATTGATCTGTGTATCATTCAAACAAATAGATGTTT TGTAAATATTACTTTTTTGTTTCAGGACTTAAAGAAACTTCAGGGACAAATGATAGCGGAACAGGAGGCACTATATGGGT CAAAACCAAGCCCTTCAAAGCCCCAGAGTGTGAAAAAGGGATCTAGGATGTCAACCGGAGGTGCAGCTAGTAGGAGAGTC TCCTTTGGAGGAGCAATGCTTCAAACTCCAAAACCCGATTCAAAAACTGCTAATTCACGTGCCATGAGAAAGACTGACAA AGCACACCAATTTGAGGATGATGGCATTTCATGTTTATCAGCAGGTGGGGTTTATTAATACTTTACTTATCACCTCCTTT AAATAAATACTTTAGGGGTTTTCTTGCTTCATATAGTTTAACAATGATCAGAAAAAAATATTGTTGGCAAAATCATATTT TCGTTTCTTTTCCTTCGTTTTTTGTTTTTCCTTTCATCCTTTGAGGAAACAGGTGATTGTTTCAGATTCTTTTTTCAGTC TGTAAATTTACTTCTCAAAATAGATCAGCCTCAATTATTTTTGGGGGACCTATTTATGTTTTTCTTTGTTTTAGTAAATG ATGCTCCTTAACAATGTCCCAACCACTCTTCTGGGTGATGGCTCCTTTGTTTGATTTTGTGCAGAACCAATGATTTGCTA AGCTTTTCTATTGTTTCATATTGAAGTAGGAAGTGAAAAGCCACATCTCAGCAGCTCAGCTGATAGAAATATCAATTTCT TCCATTGCTCTTTTATTTATTTATTTATGTTAGTGTGTATCACTAAATTGCAGAAACAGTCAATATGATGTATATAACCC ATACAAAGACATTTTCATGCATGCATTTACAACTCTTCTGAGTTTTTTCCTCTCACTATGTTAACAGCTAGAAGAGGGTT AGATATTGCTGGGGTTCCTATGAAGAAGCACTCATTTGGTGCTGGAAGTTCTCATGGTATAGAATCTCCTATGACAAGAC AACCCTTTTCGCCCATCACTTCTAATGTATCTGCAAAGGGGAGTACAGAAAATGCCGCAAATGAATTGAATTTACAGAGT GGGAAGATGCAGAAAACAATGCCACTTAACAGTGTGCCATTCACTAGTCCCTCTAAGACAGTTACTGTGGTAGATGAAGA GAACAAGACTCCAAAGGCAATGCCTATTCCTGTCCCTGCAACACCTTCGACGGTGTCAGCTCCAATGAATATGGCCATGA CTCCAAAGACAATGCCTATTCCTGTCCCTGCAACACCTTCAACGGTATCGGTACCAATGAGTATGGCCATGACTCCAGTT CCTTCAACTGTTTTAATGAACAAGGCCCCACCTCCCTTGTCAGTTCAAGAGATTGAGTATTCCTTCGAGGAAAGAAGGCT CAGTTATATGCTAGCATGA
CDS sequence (LotjaGi5g1v0194400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTAAACCTCAAGGTGATCCCCTTTCGCAAGCTGAAACAACATGTGGGACGCTTCTGTATGAACTTCAGATAATATG GGATGAAGTTGGAGAGTCTGATGCTGACAGAGACAGAATGCTTTATGAGCTTGAACAAGAGTGTCTAGAAGTCTACAGAC GGAAGGTAGATGTGGCAAATCGGTCTAGAGCTCAATTAAGGCAGGCAATTGCTGATTGCGAGGCAGAACTTGCAGCTATC TGTTCAGCAATGGGAGAGCGACCTGTACATATTAGGCAGGAAGAGCATGCAAGAATTCTTCCACAGTTGGACGAGATGCG AAAAATGAAGTCTGAGCGTAGAAATCAATTTATTGAAGTTCAAGAGCAGATTCAAAGTCTCTCGATTGAGATTTATGGTC CCATAGAGTATATTCCTGCTACTGTAGATGAAACAGATTTATCCTTGAGAAAACTTGAAGAATTGCACAGACAACTGAAT GCACTTCAAACTGAGAAGAGTAACCGCCTAAAGAAGGTCCAGGAGCACCAGTACACTTTAAGTTCTCTTTGTTCAGTGCT TGGTTTGGACTTTAAGCAGACAATCAGTGGAATCCATCCCAGTTTAGGAGACTTAGAAGGATCTAAGAGTGTAAGCAATG ATACAATACAGAAATTGGCTGTTGCTGTGCAAGAACTGCGGGAAGTTAAATTACAGAGAATGCAGAAGCTCCAAGATCTT GCTACAACAATGTTGGAGCTCTGGAACTTGATGGATACCCCAGTTGAAGAGCAACAAATGTTTCAGAATGTTACCTGTAA TATTGCTGCTTCAGAGCATGAAATAACTGAACCAAACTCCTTGTCCCTGGACTTCATCAATTGTGCTGAGGCGGAAGTAT CTAGGTTAGAAGAGTTCAAATCGAGCAAAATGAAAGAGCTTGTATTGAAGAAGAGAACAGAGCTAGAGGAGATTTGTCGA AAGACTCATTTGGTTCCAGAAGTAGATGGTGCAATTGAATATGTTTTTGAAGCTATAGAATCTGGATCTGTGGACCCTGC ATGTGTGCTTGAACAAATTGAACTTCAGATAGCGCAAGTCAAAGAGGAAGCTTTTGGCCGAAAAGAAATACTTGAGAAGG TTGAGAAATGGTTAGGAGCATGTGATGAAGAGTCTTGGCTTGAGGAGTACAACAGGGATGACAATAGATACAATGCTGGG AGAGGTGCTCATCTTACTCTCAAGCGAGCTGAGAAAGCTCGTGCCTTGGTCAACAAAATTCCAGCAATGGTTGATGCTTT GACTTCAAAAACTATAACATGGGAAAAGGAAAAAGGCATTGAGTTCATGTATGATGGTATTCGTCTACTGTCCATGCTTG ATGAGTACAATATATTACGTGAGGAGAAAGAGCAAGAACGCCGTAGGCAGCGGGACTTAAAGAAACTTCAGGGACAAATG ATAGCGGAACAGGAGGCACTATATGGGTCAAAACCAAGCCCTTCAAAGCCCCAGAGTGTGAAAAAGGGATCTAGGATGTC AACCGGAGGTGCAGCTAGTAGGAGAGTCTCCTTTGGAGGAGCAATGCTTCAAACTCCAAAACCCGATTCAAAAACTGCTA ATTCACGTGCCATGAGAAAGACTGACAAAGCACACCAATTTGAGGATGATGGCATTTCATGTTTATCAGCAGTAAATGAT GCTCCTTAA
Protein sequence (LotjaGi5g1v0194400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSKPQGDPLSQAETTCGTLLYELQIIWDEVGESDADRDRMLYELEQECLEVYRRKVDVANRSRAQLRQAIADCEAELAAI CSAMGERPVHIRQEEHARILPQLDEMRKMKSERRNQFIEVQEQIQSLSIEIYGPIEYIPATVDETDLSLRKLEELHRQLN ALQTEKSNRLKKVQEHQYTLSSLCSVLGLDFKQTISGIHPSLGDLEGSKSVSNDTIQKLAVAVQELREVKLQRMQKLQDL ATTMLELWNLMDTPVEEQQMFQNVTCNIAASEHEITEPNSLSLDFINCAEAEVSRLEEFKSSKMKELVLKKRTELEEICR KTHLVPEVDGAIEYVFEAIESGSVDPACVLEQIELQIAQVKEEAFGRKEILEKVEKWLGACDEESWLEEYNRDDNRYNAG RGAHLTLKRAEKARALVNKIPAMVDALTSKTITWEKEKGIEFMYDGIRLLSMLDEYNILREEKEQERRRQRDLKKLQGQM IAEQEALYGSKPSPSKPQSVKKGSRMSTGGAASRRVSFGGAMLQTPKPDSKTANSRAMRKTDKAHQFEDDGISCLSAVND AP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 542 | 542 | 4.5E-289 | ||
| PANTHER | 1 | 542 | 542 | 4.5E-289 | – | |
| Coils | 49 | 76 | 28 | - | – | |
| Pfam | 52 | 545 | 494 | 6.2E-126 | – | |
| Coils | 145 | 172 | 28 | - | – | |
| Gene3D | 357 | 490 | 134 | 9.0E-30 | – | |
| Coils | 449 | 479 | 31 | - | – | |
| MobiDBLite | 485 | 550 | 66 | - | – | |
| MobiDBLite | 491 | 506 | 16 | - | – | |
| MobiDBLite | 533 | 549 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Microtubule cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins. | ||
| Molecular function | Microtubule binding | Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers. |
Expression pattern of LotjaGi5g1v0194400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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