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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0195400 |
| Transcript ID | LotjaGi5g1v0195400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | PfkB family carbohydrate kinase; TAIR: AT4G10260.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|O82616|SCRK5_ARATH Probable fructokinase-5; TrEMBL-Plants: tr|I1LC17|I1LC17_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0195400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:49090821..49093948) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAATAGCTTTCCTACAGAAATGGGTCGAGTTTGCCAAATTTAAGGGACTATTATTACTTGTTCCCTTTCAAAAGCAC TCTTTCTCGGATCAAACTGTAATTCATTTTTACTTCTTGTCTCTGCTGCTTTATTGGTCAAAGCGAGAAATGTTTTTCTA AGAACACCTAAAAAATTGGCAAAATTTACAATTGACTTTGACAAACATTTTCATTGTTAAAGTTCTCACTCAACAACACT CCAGATGGAACTTCCTTGACCCTTTAATTCTAAAAGTCATTATTTATTTGAAAAATTATTCCAACCTTTGGATATAACAA TCCAACACTATTACATAAATCTAGACACAATACACTAAAAAACTACAAAACAAACATTAATTCTCCTAATCTAACGTTGA TCATAAATACTCCACCTGTTACATTGTTGAGGCTATTTTGCAAGACACAAGACATCAAACAAGAGAAGCAGTAACAGAAA GAGGAGATGACAGGCTCAGGAGATCCACTAGTGATATCATTCGGTGAGATGCTCATCGACTTTGTTCCTGACACCTCAGG CGTCTCCTTGGCTGAGTCTAATGCTTTCATCAAAGCCCCTGGTGGTGCCCCTGCCAATGTGGCTTGTGCCATTTCCAAAC TTGGTGGCAACGCTGCCTTCATTGGCAAGGTTCTTACTTTCATCATGCATTCCCCATTTTACTACTGAGATTATGGATTC ATTTACACGGTTCATGTTTGGAAACTCTTTTAGAGTTGATTATGAAATCAGAATCAATTTTAAGGAGAGACTTTTGTGAG CGGTTTCTAATTTCATATTCTAGTTAAAGAGAATCTCATTTAAACATGCTAATAGACCAACATGGATCCTCTGCAGCCAT TTCTCTGCGGCTTTTTGCTGCAAATTCTTGGTCTTGATTGTTAAATTAAATGGCATTAATTAGTAAAAAAAAAATTAATC GGTCAGAAGTTTTAAACACTTCATTTTGCTGCTACTCATGTTGAAGGGGGCAACAGAGGATACAAACTAAAAAAAAAAGG GTGAAGTCACCTTAAAAAACAAAACAAGTTTTAATAAAAAGTATTTATATGTTGTACTTGTCCCCCTTGAATTTTTAGGT TGCATCCTCCAATAAGCCTTGTTGATATTGTTGTAGATGTGTTAAATTTTCACGTCCGACCCATTTTTACCGGTTTAGTC CCTTCGATGTGATGATTGTAATGTGACAGGTGGGAGATGATGAGTTTGGAAGGATGCTAGCTGACATCTTGAAGAAAAAT GGGGTCAACACAGAGGGTGTGTGTTTTGATGTGGAGGCGAGAACTGCATTGGCTTTTGTGACATTGAAGAAGAGTGGAGA GAGGGAGTTCATGTTTTATAGAAACCCCAGTGCAGACATGTTGCTGAAGGAGTCTGAATTGAATATGGGTTTGATTAAGC AGGCCAAGATATTCCATTATGGATCTATTAGCCTCATATCAGAACCATGCAGATCAGCTCACATGGCAGCCATGAAAGCT GCTAGAGAAGGTGGTGCATTGCTGTCCTATGATCCAAATGTGAGGTTGCCTTTGTGGCCTTCTGATGAGGCTGCTAGGTC TGGGATCAAGAGCATTTGGTCTGAAGCTGACTTCATCAAGGTAAAAAATTATAAAACTAGTTTCGGGTTGTGAAAAGCCT CAAGCAGCCAACGTAAAATTGATGTGTAGTTTAATATGATCAACTGATTCATATAGTCAACAGCACCTAGCGGTAAAAGG CTTTTGTTAAGTGTTTCGTGTATTTACTGCAACATATCTAAGTGATTTTATAAAGTATATGATCATTGTCTCTATATAGG TGAGTGATGATGAAGTTCAATTTCTTACACAAAAAGATCCTGCGAAGGAAGAGGTTGTTATGTCCCTGTGGCATGACAAG TTAAAGCTGCTTCTTGTCACTGATGGAGAGAAAGGTTGCAGATATTTCACAAAGGTACTACACATCCCTGTTTTGAAAAT TTGGCTAAATTAATTCAATTAACCAATTTCTGAAGGAAACTTACTGATTGGTGTGTGTTACAATTTCACATATTTGGATC TATTGTTTGAGTGCAGACATTCAAAGGGAGGGTATCTGGGTTCTCAGTGAAGGCAGTTGATACAACTGGTGCTGGTGATT CTTTTGTTGGTGCACTTCTCACAGCTGTGGCCAGGGACCCTTCCATATTTGATGTATGTTTCCTCTCTCTCTCTCTCACA CACACACACACACACACACACACACACACACATTAATTTTTAAGACCATGGTTTATTAACTTCTTCTCATTGGTTGACAT GTTTGCTTCATTGGATCCAACATGAAGAATGAACCAAAATTGCAAGAGGCTTTGACTTTTTCAAACGCTTGTGGAGCAAT TTGTACAACACAAAAGGGAGCAATTCCTGCACTTCCAACAGCCGAAGAGGCTCAGAAATTTATTTCAAGCTGTAAAGCTA GTTAAACTCTACTTTGAAATTTGACACTCCAGAGGACTAGCTATTCATTCACATTTTTTAGTTTTGTTTTACAAGTCTGA TACATTAACTAAAATAGTTTTATGTTTATGAATAATAACACCTATTTCTGCTGCTTAGTATAGTGAGAGCTTGTATTCTT CAGAAACGAAGAAATTATTACTAATGTGAAGTTTCTTTTCTCTCATTTTGTCCTCAATTAAATGAGAGAATTTTTAATTT TTCTCTCTTAAACTAATCACCTTATTTTCTCTTATCTTTTATTTCTCCTTCTATTTTCTTTCAGCAACCAAACAATAAGA AAGTGTGAATCTCAGTTGGGCAGCAGAACAAGAGAAAATAGAATAAAATTACACTTTCCTCATGACCAATTGAAATTTTG CATGAGGTGCTGCCAAAATTATTTCTATGTTCATTTTTCTATATCCGTCCTACCCAACTAAACCAGAAGTTATGTTGTTA TACAAGGGATAATTTACAGCAAATTAAGAATGATTTTTACAAATGCCAATTGCAATGATAGATTATACACATTGATTAAG GTAACTGTAATATTACATGCCAATGGCTCTTGATGAAATCTCAGGTTCACTCTCTTGTAAGTCTGGCTCAGCTCCGCCAC CATTAACC
CDS sequence (LotjaGi5g1v0195400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAGGCTCAGGAGATCCACTAGTGATATCATTCGGTGAGATGCTCATCGACTTTGTTCCTGACACCTCAGGCGTCTC CTTGGCTGAGTCTAATGCTTTCATCAAAGCCCCTGGTGGTGCCCCTGCCAATGTGGCTTGTGCCATTTCCAAACTTGGTG GCAACGCTGCCTTCATTGGCAAGGTGGGAGATGATGAGTTTGGAAGGATGCTAGCTGACATCTTGAAGAAAAATGGGGTC AACACAGAGGGTGTGTGTTTTGATGTGGAGGCGAGAACTGCATTGGCTTTTGTGACATTGAAGAAGAGTGGAGAGAGGGA GTTCATGTTTTATAGAAACCCCAGTGCAGACATGTTGCTGAAGGAGTCTGAATTGAATATGGGTTTGATTAAGCAGGCCA AGATATTCCATTATGGATCTATTAGCCTCATATCAGAACCATGCAGATCAGCTCACATGGCAGCCATGAAAGCTGCTAGA GAAGGTGGTGCATTGCTGTCCTATGATCCAAATGTGAGGTTGCCTTTGTGGCCTTCTGATGAGGCTGCTAGGTCTGGGAT CAAGAGCATTTGGTCTGAAGCTGACTTCATCAAGGTGAGTGATGATGAAGTTCAATTTCTTACACAAAAAGATCCTGCGA AGGAAGAGGTTGTTATGTCCCTGTGGCATGACAAGTTAAAGCTGCTTCTTGTCACTGATGGAGAGAAAGGTTGCAGATAT TTCACAAAGACATTCAAAGGGAGGGTATCTGGGTTCTCAGTGAAGGCAGTTGATACAACTGGTGCTGGTGATTCTTTTGT TGGTGCACTTCTCACAGCTGTGGCCAGGGACCCTTCCATATTTGATAATGAACCAAAATTGCAAGAGGCTTTGACTTTTT CAAACGCTTGTGGAGCAATTTGTACAACACAAAAGGGAGCAATTCCTGCACTTCCAACAGCCGAAGAGGCTCAGAAATTT ATTTCAAGCTGTAAAGCTAGTTAA
Protein sequence (LotjaGi5g1v0195400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTGSGDPLVISFGEMLIDFVPDTSGVSLAESNAFIKAPGGAPANVACAISKLGGNAAFIGKVGDDEFGRMLADILKKNGV NTEGVCFDVEARTALAFVTLKKSGEREFMFYRNPSADMLLKESELNMGLIKQAKIFHYGSISLISEPCRSAHMAAMKAAR EGGALLSYDPNVRLPLWPSDEAARSGIKSIWSEADFIKVSDDEVQFLTQKDPAKEEVVMSLWHDKLKLLLVTDGEKGCRY FTKTFKGRVSGFSVKAVDTTGAGDSFVGALLTAVARDPSIFDNEPKLQEALTFSNACGAICTTQKGAIPALPTAEEAQKF ISSCKAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 324 | 318 | 7.1E-189 | – | |
| PANTHER | 7 | 324 | 318 | 7.1E-189 | – | |
| Gene3D | 7 | 326 | 320 | 1.9E-109 | ||
| CDD | 8 | 308 | 301 | 9.27161E-141 | – | |
| Pfam | 8 | 313 | 306 | 3.7E-77 | ||
| SUPERFAMILY | 9 | 321 | 313 | 2.65E-85 | ||
| ProSitePatterns | 39 | 63 | 25 | - | ||
| ProSitePatterns | 258 | 271 | 14 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phosphotransferase activity, alcohol group as acceptor | Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor). |
Expression pattern of LotjaGi5g1v0195400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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