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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0197100 |
| Transcript ID | LotjaGi5g1v0197100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein BPS1, chloroplastic; TAIR: AT3G61500.2 BPS1-like protein; Swiss-Prot: sp|Q54G21|FKBP5_DICDI FK506-binding protein 5; TrEMBL-Plants: tr|K7LK12|K7LK12_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0197100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:49300378..49301538) extracted from Lotus japonicus Gifu genome v1.2.
GTTAATGTACAATTGTTCATGTCCTTTGAACTTTTAGTCTCCCATAGCAAAGCAAACACAAGCTCTACACATCATGAGAT CAATCCTGTTGAGTCTCCCCTGGCGGCAGCAGATGGTGGCGGTTGCCCCGTTGCCGGAAAAACCCCAATTCGACCGGAAA CTCACAGAGGAGCTTAACACCCTTTTGTCACAAAGCAAAGGTGGTGTGGTTGGTTTGGCTCAATTTCTTGATGCTGCCAT CACCACTCAGAAAATTGCCTTGGATTCTCTAGTGAACATTTCTTGCATAGATGGTGCTGATCGTGGCGGTGTTGAGAAGT ACCTAGAAGACAACACTGAGCTTCTTGATTCATGCAATTACTTTCTGGAAAAAATGGAAGGTATCAACAAGTATGTGGAC ACATTGAGAGTGGTTGCACATTTGGTTGATGATTCTAAGCCTAATTCAGTGGCAGCAAAACGTGCATTGGAACTTTTGGA GTCATGTGAGAAGAGATGCAGAGTAATGGGGAGGAAGAAGAAGAACAGTGGTTCTTGTTTGAAGAAACTGTTGCGGCAAA AGTATGAAAAAACAGATCTTGGTGAGATCATGTGTGGTTCTAAGGCCATGGCTTTGATGTGTTGCAGCTTTCTTGAGACT GGTCTGTCATTTGAATCAAAAAGTGGACTGGTTTCAGTGAAGCAGTCTCAGCCTGTGAGATCTTCATGGTTGAGATTATT GGAGGAGATGGCAAAGCAATCGTCTTTGTTGACAATTGATGAGTTGCAGCAGACAGTGACTGCAGCTAGAGAATTGAAGG TGCACATGAAGGGTAAAAGGGAAAAGGAGATGAAATCTGCTGTTGAGAGATTGAAGAAAAGATGCAGGGGATTGGAGGAT GGGATTGAGATTATTGAGGGAAGAGTGAAGGATTTGTATAGAAGTTTGATTGATGTTAGGATGGCTCTTTTGGGAATTCT TTCCCAAGCCTAAGTTTTGTTAGATTTAATTAGAATAGCTAGGGAAGTATGGTTAGGACTTAGGAATTATGCAATGTGCT GTGCTAACAGTTACTGATGTATAGATTTAATCAGAGATGTATTCACTGTAATTAATCCCAATAATTTATGTAATTAGTTA CTTATTATCTGTAGTTTTTTTATAAGCTCTTCTTATCTGTA
CDS sequence (LotjaGi5g1v0197100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGATCAATCCTGTTGAGTCTCCCCTGGCGGCAGCAGATGGTGGCGGTTGCCCCGTTGCCGGAAAAACCCCAATTCGA CCGGAAACTCACAGAGGAGCTTAACACCCTTTTGTCACAAAGCAAAGGTGGTGTGGTTGGTTTGGCTCAATTTCTTGATG CTGCCATCACCACTCAGAAAATTGCCTTGGATTCTCTAGTGAACATTTCTTGCATAGATGGTGCTGATCGTGGCGGTGTT GAGAAGTACCTAGAAGACAACACTGAGCTTCTTGATTCATGCAATTACTTTCTGGAAAAAATGGAAGGTATCAACAAGTA TGTGGACACATTGAGAGTGGTTGCACATTTGGTTGATGATTCTAAGCCTAATTCAGTGGCAGCAAAACGTGCATTGGAAC TTTTGGAGTCATGTGAGAAGAGATGCAGAGTAATGGGGAGGAAGAAGAAGAACAGTGGTTCTTGTTTGAAGAAACTGTTG CGGCAAAAGTATGAAAAAACAGATCTTGGTGAGATCATGTGTGGTTCTAAGGCCATGGCTTTGATGTGTTGCAGCTTTCT TGAGACTGGTCTGTCATTTGAATCAAAAAGTGGACTGGTTTCAGTGAAGCAGTCTCAGCCTGTGAGATCTTCATGGTTGA GATTATTGGAGGAGATGGCAAAGCAATCGTCTTTGTTGACAATTGATGAGTTGCAGCAGACAGTGACTGCAGCTAGAGAA TTGAAGGTGCACATGAAGGGTAAAAGGGAAAAGGAGATGAAATCTGCTGTTGAGAGATTGAAGAAAAGATGCAGGGGATT GGAGGATGGGATTGAGATTATTGAGGGAAGAGTGAAGGATTTGTATAGAAGTTTGATTGATGTTAGGATGGCTCTTTTGG GAATTCTTTCCCAAGCCTAA
Protein sequence (LotjaGi5g1v0197100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRSILLSLPWRQQMVAVAPLPEKPQFDRKLTEELNTLLSQSKGGVVGLAQFLDAAITTQKIALDSLVNISCIDGADRGGV EKYLEDNTELLDSCNYFLEKMEGINKYVDTLRVVAHLVDDSKPNSVAAKRALELLESCEKRCRVMGRKKKNSGSCLKKLL RQKYEKTDLGEIMCGSKAMALMCCSFLETGLSFESKSGLVSVKQSQPVRSSWLRLLEEMAKQSSLLTIDELQQTVTAARE LKVHMKGKREKEMKSAVERLKKRCRGLEDGIEIIEGRVKDLYRSLIDVRMALLGILSQA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 299 | 298 | 7.1E-99 | – | |
| PANTHER | 2 | 299 | 298 | 7.1E-99 | – | |
| Pfam | 79 | 294 | 216 | 1.1E-7 | ||
| Coils | 257 | 277 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0197100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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