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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0206500 |
| Transcript ID | LotjaGi5g1v0206500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methyltransferase; TAIR: AT1G54650.1 Methyltransferase family protein; Swiss-Prot: sp|Q6AXU8|METL6_RAT Methyltransferase-like protein 6; TrEMBL-Plants: tr|A0A0R4J499|A0A0R4J499_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0206500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:50869395..50873513) extracted from Lotus japonicus Gifu genome v1.2.
GTTTCAAAAAACAAAAAGGAAGTATAAAATGCACTTAATATAAGAATGGCTATAAGAATAATGAGTTGAGAATTGGAGGG ATGAAGAATGGAGAATAGTTGTGCAGTTGAAGCAGAGTACTTCTGCAAGGACTTCGATTGGGAAGAACATAGAGCAGAAG TAGAATCAAACCCTAGTTTTCGCTACCATTTTGAATCCACCCCTTCTTCTTCATCTTCAACACAATCAACATCATCGCCA GATTCAGACGTGCAAGCTTGGAGCCAATTTCACATTCGCCATGCCTCCGGAAAATTCTTCAAGGTTCCGAATTTCCATCA CATTTTTCACATTCATACCCAAGCAAAATTAACCTAACATTTTGATTGATTCCGTTCAGGAGAGGCGCTATTTGTTGAAG GAATTCCCAGAATTGCTTTCTTCTCCCCCAAATTCTCACCTTAAGCTCCTTGAAGTCGGTTGCGGAAATGGCAGCACTGT TCTCCCTATACTTAGGTTTCTTTCTTCTCCTTTACATTGTGTCTTTCTTTTGATGTATATATATTTACTGATAGGTTAGG AGATTGATCATTTTTTAATTGTTTTCTACCACCATGTTGATTTTTGCTTGATTCATTTGGTTGAAGCTGGTAGTTAAGAT TTCAAAATACTGATTCTGGGTTCATTTACTATTTATGAATTTGCAGATTAAGAAAAAACTTGGGAAAACAGCTTAATTAA GTGTGACCATAAGCGCGCTTATTCATAAGCTATATATAAGCATAAGCTCTTTTTCATAAGCTAAATAAGCTCAAAACAGC TTATGGTAGGTCATAAGTTGTTTGCATAAGCTCTCTCAAACACTTACACAAGCGCTTATGCTATCAGATAAGCTCAAATA AGCTCTCCCAAACGGGGTCTAAAACTAGTGACTTCCATTTTGTCATTTTGGCTATTTGCTGTTGGTTTTTTTTGTATCTT GCAGTTTTTGATTCTTATGAAACTGTCTGGTGTAGGGCCAACAAGGATGTTGTTGTTTATGCATGTGACTGTAGTAATGA GACTCTTGAGAGGGCTAAGGAAATTATAAGTGGCAGTGCTACCGGAGTTGCCTCTTTTAAGCATCGTTTCCATACGTTCT TTTGTGATTTTTCTACTAATGGATTCCCAGACTGGTTGGCATACAACCCTTGCCAAGATAAAATTTTAAAGGAGTCATAC TTCTTGTCAGGTTACTTAGATTTATCTTTATGCTGCTTATTTATACCATGTTATGTTATTGTTTGATCGTTGATGACTCC ATAAGAGGTTAGAGTGTTAGACTTAGTTCTCTCTGTTTTCCCTCCAGATTTCAAAGGGGATAATGGACTTCGTCTTACCA ATCCATATTTATCCGAAGAATTTGACTGTTGTGTTGGCGGAGTAGACTTTGTGACATTGGTCTGAGCTCTTCTCCTCTAA AATTATTATAAGTTCAATGACATTATGCTTCCAGAACTTGAGTGCATGTTAGAGCCAAAATAAGTGCCTTGTGTTGTTTT AACATTTATTATTTCAAATGTTTATATTGACAGCATATTTCTAATCCTAACAACATATGTTGACAGATATACTCTCCGTT TCAAAATATTTATCATTTTACTAAATTTTGTTATGCATCTGTTGTCTCCAAACTATATCCTTATCTATTAGTATTTGTAC CAAGTAGAGCTTGAGAGAGTATTGATGGAATGAAAATATTTTGAATATTTTAATAAAGAGTAATGTAGTTAAATTAAATG TAATTTTGTTTTACTCTTAAGAGGTTATTTAATAGCTTTGTTGATCTTTGTGCAGCTATCTTAATATCTTAAAATGGTTG AAGTATTAGGAAAGTGCTTCGGCTGTAACTTACTATCTCAGATGTTGCATAAAGTTCTTTGTATCTACACCTTGCTTTCA TTCGGAAGATACATTCATTCATGCTTTATTCTCAATGATTGGTCATACTTAGTTTTTTATCTACTTGTGGCTCTTATTTG TCCGTTGATTTAGTGTTAAGCACTCATATGTTTAATAATTGCCGTAGTGATGTTCAATCTTTCTCTGTCAGCTCTCTTAA TTCTTGTCTCATTTCGGTGCATAATATTCATTGGCCTTCATAGCTATAAGTTGGAAGATACATGCCTTCATGCTTTATTC TCAATGGTTTTGACAGCTAGGTTTTCATCTACTTGTTGCTCTTATTTGTCCGTTGCTTTAATGTTTACTACAAATTTCTA AGTACTCATATAGTTTATAATTGTTTTGCCTTAGTGATGTTTAATCTGTCTGTGTTAGCTTTCTGAATTCTTCATACACA ACTACTTTATCTCAAATCTATGAAATAAATCTGAGACTCTCAGCTCTTATTTGTCCGTTGATTTAGTGTTAAGCACTCAT ATGTTTAATAATTGCCGTAGTGATGTTCAATCTTTCTCTGTCAGCTCTCTTAATTCTTGTCTCATTTCGGTGCATAATAT TCATTGGCCTTCATAGCTATAAGTTGGAAGATACATGCCTTCATGCTTTATTCTCAATGGTTTTGACAGCTAGGTTTTCA TCTACTTGTTGCTCTTATTTGTCCGTTGCTTTAATGTTTACTACAAATTTCTAAGTACTCATATAGTTTATAATTGTTTT GCCTTAGTGATGTTTAATCTGTCTGTGTTAGCTCTCTGAATTCTTCATACACAACTACTTTATCTCAAATCTATGAAATA AATCTGAGACTCTCAGCTCAATGTTGCAAGTTTTAATAACCTCTCATTGTATATGTTGCTTATTATGATGTGTAATTTCA GATATTTACTCTATCAGCAGTACCACTGGAAAGGATGCCAAGGTCCATCAAGGAATGTTTTACTGTGTTAAAGCCAGGAG GGATGGTTTTATTGAGGGATTATGGTAATGAACAAACTTACCAACTTATTCTGCCCTGAGCTTCTGTGAAAATAAATCTG TTGCTTAAGTAAATCCTTTATGTCATAATAGTTCTTTTGAAACCAAGTACTAGTTTGGTTTGAGAAAACATTTATATTTT ATTCTCAGTTTTTACATATAATTATAAAAATGTTATCTTACTTTTACTTTGTTTCCTGTTTTTAAATATTTGCAGTAGGA AATATTGAAAACAATGAAAAAGTTATCTTCACTATTTCCTATGCAAAGATTTAAAAATAGAAAATAAAAAAAGATGATAC TTATGTCCTTAAAAGTTAAAACAAGTAATAAAAAAAACTCAAATTAAACGGACATTAAATTGCTGTCATTGACTGAACCT CATGTAATCAGGCCTCTATGATATGACCATGCTTCGATTTGAGCCAGACAAGAGAGTGGGATTCAGGGAATACATGCGGT CAGATGGAACACGATCATATTTCTTTACTTTGGAAATTGTCCGGAACCTATTTCTGAATGCAGGCTTTACTGAGGTATGT ATCTTCCTTAACTGTAAGACAAGAGCTTGTGGGTTAATGTAACTAATAGGATAGGTCTCTAATTAATTTCGATTAGAAAC ATAATTTGACTTGTAATCCTGCATAAAATAATACTTGTTACAAGTTCTCATGTATGTGATGTAAGTTGAGCTTAGTTACC TGTTAATCGTAAATTGTTGATGCAAAATGTAGAACCTTCGATCTGGCAACTTTCCTATAGTTCTTTGTGAAACTTATTTT CTGCTGGCTTCCACTAAATTTGGTTTTCTATGAACTATGCAGCTTGAGCTTGATTACTGTTGTGTCAAGTCTGTAAATCG CCGGAAAGGGAAGAGTATGCGAAGAGTTTGGGTTCATGGGAAGTTTCAGAAGCCTGCCCTGAGTTAGTTGTCAATAATCT CCCTTGGCCACACTGAAGATTATAAAAGAGAGACAGGTACTGGAGAACTGTTGTTTCTGTCCCAATTTTTGATGTGTTGA GAATCTTTTTCTTTTTGGTTTATATACGCTGAGAATTGGTAAGGTCTCCCATTTGAAAAGCAAGGGCTGCAGTCCAGATT ATCTGTTTGTGAAATCATTTACATTTGTTGAATAGAATATCTGCAAGCTTCAATCTTTGTTTACTCTTCACAAAATTATT TTGTTAAACAAGTTATAAATAAAGTTTAATATTTCAAAA
CDS sequence (LotjaGi5g1v0206500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAATAGTTGTGCAGTTGAAGCAGAGTACTTCTGCAAGGACTTCGATTGGGAAGAACATAGAGCAGAAGTAGAATC AAACCCTAGTTTTCGCTACCATTTTGAATCCACCCCTTCTTCTTCATCTTCAACACAATCAACATCATCGCCAGATTCAG ACGTGCAAGCTTGGAGCCAATTTCACATTCGCCATGCCTCCGGAAAATTCTTCAAGGAGAGGCGCTATTTGTTGAAGGAA TTCCCAGAATTGCTTTCTTCTCCCCCAAATTCTCACCTTAAGCTCCTTGAAGTCGGTTGCGGAAATGGCAGCACTGTTCT CCCTATACTTAGGGCCAACAAGGATGTTGTTGTTTATGCATGTGACTGTAGTAATGAGACTCTTGAGAGGGCTAAGGAAA TTATAAGTGGCAGTGCTACCGGAGTTGCCTCTTTTAAGCATCGTTTCCATACGTTCTTTTGTGATTTTTCTACTAATGGA TTCCCAGACTGGTTGGCATACAACCCTTGCCAAGATAAAATTTTAAAGGAGTCATACTTCTTGTCAGATTTCAAAGGGGA TAATGGACTTCGTCTTACCAATCCATATTTATCCGAAGAATTTGACTGTTGTGTTGGCGGAGTAGACTTTGTGACATTGA TATTTACTCTATCAGCAGTACCACTGGAAAGGATGCCAAGGTCCATCAAGGAATGTTTTACTGTGTTAAAGCCAGGAGGG ATGGTTTTATTGAGGGATTATGGCCTCTATGATATGACCATGCTTCGATTTGAGCCAGACAAGAGAGTGGGATTCAGGGA ATACATGCGGTCAGATGGAACACGATCATATTTCTTTACTTTGGAAATTGTCCGGAACCTATTTCTGAATGCAGGCTTTA CTGAGCTTGAGCTTGATTACTGTTGTGTCAAGTCTGTAAATCGCCGGAAAGGGAAGAGTATGCGAAGAGTTTGGGTTCAT GGGAAGTTTCAGAAGCCTGCCCTGAGTTAG
Protein sequence (LotjaGi5g1v0206500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENSCAVEAEYFCKDFDWEEHRAEVESNPSFRYHFESTPSSSSSTQSTSSPDSDVQAWSQFHIRHASGKFFKERRYLLKE FPELLSSPPNSHLKLLEVGCGNGSTVLPILRANKDVVVYACDCSNETLERAKEIISGSATGVASFKHRFHTFFCDFSTNG FPDWLAYNPCQDKILKESYFLSDFKGDNGLRLTNPYLSEEFDCCVGGVDFVTLIFTLSAVPLERMPRSIKECFTVLKPGG MVLLRDYGLYDMTMLRFEPDKRVGFREYMRSDGTRSYFFTLEIVRNLFLNAGFTELELDYCCVKSVNRRKGKSMRRVWVH GKFQKPALS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 2 | 329 | 328 | 1.0E-77 | ||
| PANTHER | 3 | 326 | 324 | 3.5E-129 | – | |
| PANTHER | 3 | 326 | 324 | 3.5E-129 | ||
| SUPERFAMILY | 60 | 297 | 238 | 7.85E-25 | ||
| Pfam | 72 | 296 | 225 | 5.2E-13 | – | |
| CDD | 94 | 244 | 151 | 0.00719045 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0206500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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