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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0209300 |
| Transcript ID | LotjaGi5g1v0209300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein; TAIR: AT3G04470.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q86YJ7|AN13B_HUMAN Ankyrin repeat domain-containing protein 13B; TrEMBL-Plants: tr|I1NIN6|I1NIN6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0209300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:51241940..51245484) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTTGCTTCCTTCCTTCTTCACCAACCTCCATTGATGAGACTTGAGTTGAATTGAAGAAAAATCCACAATCCACATCA CATGGAAGATATAGCTAAATACTCTCACAGTCCTGCTCACGTGGCAGTTGCGAAACGCGACCACGCCGCGCTCCGCCGCC TCGTCTCCACCCTCCCCCGCCTCGCCAAGGCCGGCGAAGTCACCACGGAGGCAGAATCCCTCACCGCCGAGGTAAGAGCC GAGGAGGTTTCCTCGGTTATCGACCGCCGTGACGTTCCCGGGAGAGAAACCCCGCTCCACCTCGCGGTGCGACTCCGTGA TCCGGCCTCCGCCGAGATTCTCATGGCTGCCGGCGCGGATTGGAGCTTGCAGAACGAGCAAGGGTGGAGCGCTCTACAGG AAGCTGTGTGTAGTAGAGAGGAAGCGATTGCCGTCATAATCGCGCGGCACTATCAGCCTCTCGCTTGGGCCAAATGGTGC CGGAGGTTGCCGCGGATCGTTGCTTCCGCTGCACGCATTCGTGATTTCTACATGGAGATTTCCTTCCATTTTGAGAGCTC TGTGATTCCTTTCATCGGGAGGATTGCCCCTTCTGATACCTACCGGATTTGGAAGCGCGGTTCGAATCTCCGGGCTGATA TGACGCTCGCCGGATTCGATGGCTTCCGGTTGCAGCGTTCCGATCAGACCTTTTTGTTTCTGGGTGAAGGGTATGCTTCT GAGGATGGTAATGTGGTTCTTCCGCCGGGTTCTTTGCTTGCTCTAGCTCACAAGGAGAAGGAAATCACCAATGCTTTGGA AGGAGCGGGGACGTTGCCGACGGAAGCTGAAGTTGCTCATGAGGTTGCTTTGATGTTTCAGACGAATATGTATAGACCAG GGATTGATGTGACTCAAGCTGAGCTTGCTCCGCATTTGAATTGGAGGCGCCAGGAGAAGACTGAGATGGTAGGGAACTGG AAGGCAAAGGTTTATGATATGCTTCGTGTGATGGTGAGTGTGAAATCGAGGAGGGTTCCGGGAGCTTTGACCGATGAAGA GCTTTTCGCTGTGGAGGATGGTGAAAGTGTGATGAATGGAGAGAACAATGATGAGTATGGTGATGTGTTGACTGCTGAGG AAAGGATGCAGTTGGATTCCACGCTGCGAATGGGGAACAATGAGGGTGTTTGTCAGGATGAGGAAGAAAATGGTTCAGCT GCTGCCAATGAGAATTGTGAAGCCAATGGTGGGGTTAAAGAGAAGAAGGGCTGGTTTGGTTGGAACAAGAAGAACATGAA GAGTGGTGGAGATGAACTTGAGGATTCAAAAGTTTCGAAGAAAGCTTCAATGTTGGGCCAAGAAGGTGGCAATCAGAGAA AGTTACAACCTGAGTTTCTGAAGGAGGATAATGGTGGAGAATTGAAGAAAGGGAAGGATAAAAATTTGAAAAAGAAGATG AAAGGAACGTCTAAGGAGCCTAAGAATGAGAGTGAATACAAGAAGGGTTTAAGACCTGTTTTGTGGTTGACTCCAGACTT CCCTTTGAAAACAGATGAACTTCTGCCTCTACTTGATATCTTAGCGAACAAGGTTAAAGCTATTAGGAGACTCAGAGAGC TTTTGACAACCAAACTTCCTCATGGAACCTTTCCTGTCAAGGTAACTCAAATAATATCATTAGCAAAAATGTATCCTTGA GTACTCTTTTTATACAATGTTGCTCTGCATTCTTTGGGTTATCCCCAGAATTGAGTTTGACTCTTAGAATTAATTGTAGA AAGATTTCCAAAAATGTATCCTTGAGTACTCTTTTTATACAATGTTGCTCTGCATTCTTTGTGTTAGAATATGCTCACAT CACCTAAGTCTAGTTAGATATGGCACTATTCATATATTTATTTCATACATAGTACTACTAGATATAAGTCTCTTTATTTT CCTGTTTGTGTCAATGTTGTGAAGTTATTGAGGGAACCTACTTTTGTTTGGCAAAGAAACAAATGTCATCATTTTGATCG TCAGAAGATTTATTATCAATTTAGTCCCTAAAAGGCAAAGTATCATCAATTTAGTCTCTCAAATCTCAATCAGGCTAAAC ATCATCAAATTAGTCCCTAATGTAGACTGTGCTACTCTCATTTCTCTGTCTTTTTGGTGTAAAATGCTGACAGATCATTC CTCTCAGTTGGCCACAGAAAATCAAATTTGATGACTATTTACATAATTCTGGGATAACTTGACAACGATTTCAAGAACTA AATTGATGACACTTGGATCATCGGAGGATGAAAGTAGGAATTATACTTTTCTTTTTTTAGAAGTTGTAGCTTGTCTGGAC ATTCTTCTTCTTTCTTGAAAGCTCTTTCTTTCTAGTTTTTGGGTTGGGGGGCCTTGTTTTTGTTGATTTTGCATGTGTGG CAGATTCTTTTTCTACTGTCACAAGCGGGTGCGATACAATTTCTTTGATTTCCACATGTCAGATCGGAATGTTGATGGTT AATTGTTACTAATAGAGATTGATGAATAAAATGATCATTCTCCAGAGATAAATTATCATTATTATACTACAAATATATGA CTTGAACTTCACAGCGTCATTATTTTAGATATTTATTATTTATTATTTTGTTTTTAAGTTTTTTCTCTCTTTGGATCTTT TTCCTAATTAAACACTTGCATTGGGGTTGTGTTAAAAAAATGACAAGTTTCTCAATTCGCTAGATTATACCCTGCATTCT TTAGGCTGACACATGTAGTAGCACATTTCTGGATTGATTTATGAAGATATCATGTTCCTCATCATTTGTGCAGAACTATA TATTTCAAAGCAAATTCCATACTGTTGCGGGAAATTCATTGAAATTGCACTTGCTTCTTTTCTATTATTTGTTCTAGATT TTGTCTCTCGATATGAAAACACTAGCACTCAAATGCTGAAGTCATGTTGGTGTTCTAAAATCCTTTTTTGAACATTTTAG ATGCACTTTAATATTTCAGATGTATATCAGATTCATTTTCATATGTTTTAATATTTCATGAATGTATGTTGTACTGTATA ATATCTGTATTTCATACATGAATGTCACTGTTTGTACGTTATGTCGCGGCATACTTTGCATTAATGCAAACGTTTCTTAT GCCTCTGGTTTGCCATTGCTATGCAGATAGCTATCCCTATAGTCCCAACCGTGCGGGTCCTTGTCACTTTCACAAAATTT GAGGAGCTTCAGCCAGCTGAGCTAGCTGAGGAGTTTTCAACTCCTCTTTCTAGCCCAGCTTACTTCCAGGATACCAAATC CAAGGAATCAGAAGGGTCTGCATCCTGGATTTCATGGGTGAAAGGAAGTCGTGGCACGCAATCCAGCGACTCTGACGGTC ACAGATACAAGGATGAAGTCGATCCTTTCAGTATTCCTTCAGACTACAAATGGGTGGATGCTAATGAGAAGAAACGCCGA GCAAAGGCAAAAAGAGCCAAAAGTAGGAAACAAAAGAAGCAGACAGTTGCAAAAGGAGGCGATGGTGTGCGCCAGGTGAG TGAGGATGTTGAACAACACCAATAA
CDS sequence (LotjaGi5g1v0209300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGATATAGCTAAATACTCTCACAGTCCTGCTCACGTGGCAGTTGCGAAACGCGACCACGCCGCGCTCCGCCGCCT CGTCTCCACCCTCCCCCGCCTCGCCAAGGCCGGCGAAGTCACCACGGAGGCAGAATCCCTCACCGCCGAGGTAAGAGCCG AGGAGGTTTCCTCGGTTATCGACCGCCGTGACGTTCCCGGGAGAGAAACCCCGCTCCACCTCGCGGTGCGACTCCGTGAT CCGGCCTCCGCCGAGATTCTCATGGCTGCCGGCGCGGATTGGAGCTTGCAGAACGAGCAAGGGTGGAGCGCTCTACAGGA AGCTGTGTGTAGTAGAGAGGAAGCGATTGCCGTCATAATCGCGCGGCACTATCAGCCTCTCGCTTGGGCCAAATGGTGCC GGAGGTTGCCGCGGATCGTTGCTTCCGCTGCACGCATTCGTGATTTCTACATGGAGATTTCCTTCCATTTTGAGAGCTCT GTGATTCCTTTCATCGGGAGGATTGCCCCTTCTGATACCTACCGGATTTGGAAGCGCGGTTCGAATCTCCGGGCTGATAT GACGCTCGCCGGATTCGATGGCTTCCGGTTGCAGCGTTCCGATCAGACCTTTTTGTTTCTGGGTGAAGGGTATGCTTCTG AGGATGGTAATGTGGTTCTTCCGCCGGGTTCTTTGCTTGCTCTAGCTCACAAGGAGAAGGAAATCACCAATGCTTTGGAA GGAGCGGGGACGTTGCCGACGGAAGCTGAAGTTGCTCATGAGGTTGCTTTGATGTTTCAGACGAATATGTATAGACCAGG GATTGATGTGACTCAAGCTGAGCTTGCTCCGCATTTGAATTGGAGGCGCCAGGAGAAGACTGAGATGGTAGGGAACTGGA AGGCAAAGGTTTATGATATGCTTCGTGTGATGGTGAGTGTGAAATCGAGGAGGGTTCCGGGAGCTTTGACCGATGAAGAG CTTTTCGCTGTGGAGGATGGTGAAAGTGTGATGAATGGAGAGAACAATGATGAGTATGGTGATGTGTTGACTGCTGAGGA AAGGATGCAGTTGGATTCCACGCTGCGAATGGGGAACAATGAGGGTGTTTGTCAGGATGAGGAAGAAAATGGTTCAGCTG CTGCCAATGAGAATTGTGAAGCCAATGGTGGGGTTAAAGAGAAGAAGGGCTGGTTTGGTTGGAACAAGAAGAACATGAAG AGTGGTGGAGATGAACTTGAGGATTCAAAAGTTTCGAAGAAAGCTTCAATGTTGGGCCAAGAAGGTGGCAATCAGAGAAA GTTACAACCTGAGTTTCTGAAGGAGGATAATGGTGGAGAATTGAAGAAAGGGAAGGATAAAAATTTGAAAAAGAAGATGA AAGGAACGTCTAAGGAGCCTAAGAATGAGAGTGAATACAAGAAGGGTTTAAGACCTGTTTTGTGGTTGACTCCAGACTTC CCTTTGAAAACAGATGAACTTCTGCCTCTACTTGATATCTTAGCGAACAAGGTTAAAGCTATTAGGAGACTCAGAGAGCT TTTGACAACCAAACTTCCTCATGGAACCTTTCCTTTATTGAGGGAACCTACTTTTGTTTGA
Protein sequence (LotjaGi5g1v0209300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEDIAKYSHSPAHVAVAKRDHAALRRLVSTLPRLAKAGEVTTEAESLTAEVRAEEVSSVIDRRDVPGRETPLHLAVRLRD PASAEILMAAGADWSLQNEQGWSALQEAVCSREEAIAVIIARHYQPLAWAKWCRRLPRIVASAARIRDFYMEISFHFESS VIPFIGRIAPSDTYRIWKRGSNLRADMTLAGFDGFRLQRSDQTFLFLGEGYASEDGNVVLPPGSLLALAHKEKEITNALE GAGTLPTEAEVAHEVALMFQTNMYRPGIDVTQAELAPHLNWRRQEKTEMVGNWKAKVYDMLRVMVSVKSRRVPGALTDEE LFAVEDGESVMNGENNDEYGDVLTAEERMQLDSTLRMGNNEGVCQDEEENGSAAANENCEANGGVKEKKGWFGWNKKNMK SGGDELEDSKVSKKASMLGQEGGNQRKLQPEFLKEDNGGELKKGKDKNLKKKMKGTSKEPKNESEYKKGLRPVLWLTPDF PLKTDELLPLLDILANKVKAIRRLRELLTTKLPHGTFPLLREPTFV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 136 | 136 | 3.7E-12 | ||
| PANTHER | 3 | 519 | 517 | 1.4E-230 | – | |
| PANTHER | 3 | 519 | 517 | 1.4E-230 | ||
| SMART | 7 | 36 | 30 | 520.0 | ||
| ProSiteProfiles | 67 | 109 | 43 | 12.196 | ||
| ProSiteProfiles | 67 | 99 | 33 | 10.072 | ||
| SMART | 67 | 96 | 30 | 9.9 | ||
| SUPERFAMILY | 68 | 128 | 61 | 3.26E-9 | ||
| SMART | 100 | 129 | 30 | 1700.0 | ||
| Pfam | 184 | 519 | 336 | 8.6E-78 | ||
| MobiDBLite | 402 | 465 | 64 | - | – | |
| MobiDBLite | 428 | 465 | 38 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0209300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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