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LotjaGi5g1v0216300.1

Overview

Field Value
Gene ID LotjaGi5g1v0216300
Transcript ID LotjaGi5g1v0216300.1
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Kinesin, putative; TAIR: AT5G27950.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q8W0Y9|KN14U_ARATH Kinesin-like protein KIN-14U; TrEMBL-Plants: tr|A0A151U570|A0A151U570_CAJCA Kinesin-like protein KIFC3; Found in the gene: LotjaGi5g1v0216300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:52208339..52214863) extracted from Lotus japonicus Gifu genome v1.2.

TGGGAAGGACATGCTAATTAGTATCCATTTGCTGATTTTCCAACTTGCTTCTTGGAAATATAGGTGGGACCGTGGGAAGG ATATAGGGCTTATATAATAGATCAAGAGGAAACAGAAGGAATTGGTAATTTTTTTCACTGCTAACTTCTAACAACACATT CTCAGCGAACGCTAGTATTTTTTAGCCGCGGTTATAACCGCCGCAAATGCATTATTAGGCCCCCTCTAAATCCCGTTTTT TTTGTAGTGAGGTTAGAGATTTTCAAATAATTCAAGTTGATGACCGGAGGCAGTTGCAACCAATGCTAAATTTATAATTT TTTTAAAACAATTATGATTTTGGTTCGAACCGGTGTTAGATCTCTGAAAGCTCCATTCATTCTCATTTATGCGGGTATGT TTTTTCGCTTCCATTACTTCACTTGGTTTCTTATACCGATTAAAAAGACTTTATATCTTGTTGAATTAAAAAGCATAAGA AGTTTATTGAGATGTCAGAAAATAAAAAAATATTAAAAAATTCAAAAAATATCGTACTACACATATTTTCGAGTTAGATA ACGCCACGTGTGTTCTTTTAAAAATAAATAAATAATGAAGACCACGGAAGGATCGGATATCCAAAGGATGGAAGGTAAAG TTCTATAATGGTCTTTTAATTATATTATGCAAAATCCACTATGAACTAAGAACAAGAGCACACAATGAAATTTGAAATTC CTACGTTAGATCTTAAATCTGAATTTTGAAGCTTATGACGTGGAGAAGATAAAACAAGCAACAAAAATGACAAACATGTA GTAGACTGTTCTAGATTTAGGTTTGAAACCAAGAAATCCTGAATTCAAATATGGAATACCAACTAGATCAAGCAACACTT TCATGAACTCAAAGAGTTGCTGTCAAAAAAAAAATGAACTCAAAGAGTTGTAACTGATTAAATTGTGCTAAATGATTAGC ACTAATTCAACTAGATCAAGAAACTCATGAGTCATGACAATTTGATAAAAAATAATGAAGATCATATGTAGATAAACATT TAGGCATCATTTGTTTCAACAGAGAAATGGTGGAAAGAGATTGGTGAGAGCAGGAGCGGATGCAAGGTTCTAACCAAGAC TATGTGCATATGATTTCTAATAAAATTTAGATTTAAACATACATAATGTGTGCAACTAATCTGATATATAATTAACATCT TTATAATAATAAGAAATATACAAGAAGAATGAGTACAATATATATATATTAACCGGCATATACACGTTATTAGATAATTG TGCTATTTGTTCATTTGTCTACTTGAGAGGGCTTGTCTCAAGACTTTTATCATCAATATAATAATTATGTTGGAGGCAAT ACAAAATGTGCTCCTTATATACAGGAGCATGCAATGGGAAGCCAAGTAACCAATGGGCCAAGTCCATGGTGACCTAGATG CTAAAATACTAACTCATATTCTAACATATTGGGTCACAAATGTAAAACTCAATCTTAAATCGTATATGAGCCGAAATACA TGCTCTAAAAACCTAAGTTAAACAAGCCTAAACCTAAATTACTTAAAGTCCCATATAAAATCTCAAAAACAAAACACGAA AGGTAATACCGAAATTAGGAAAAATACTAGCTATAAGAGCAAAGTTGAAAGTAAAGTCTTGGAAGAAGATTCTGACAAGC TCTCCATGAGGGATATCACCTAAGGTCCTCCCTCCATATGCAAAGATACATCACTTTCCCGGATCATCTACATCCTTCTA CAATTAAATCTAGAGGTCGGAATTTAATAAAATTTCAACTAAAAGTTTGTTTTAATTTGTGAATCGTAGAGGATCGGGAT CCTTTCCTCAAACCTAATTACGCTTTTAATTTCTGATATATCTTCCTTTAGTTGATTTATTGAAGCATCTTTTAACCGCA AAAAATATAGAATTAATGTGGTAAAAATCTGAAATTGAAGTTAATTGTTTTCCTTCCAACTCAAAACTCTAATTCCAATT CACATATTAATAAACACTATCTTCTCTTCTCATATTCCCTGTTTTCATCTTCTATCTTCACAGTTTCTCTCCAACACCCA AACATACCATGTTCAGCCTCACCTGCACTTTGACTTTTGTTATCCCTCAACCTTCTCCTCCTCCCTACCATCCCTAATAT TAGGCACATCCTCATTTTCTTCACCCACCTTACACTTCCCATTTCCATCCAACTTATTCCCCCTTACTAGTATACTCATT AATCCATCATTTATGTGAATGTATAAAACAAAACCATTACACAAATTAAGAAATTTGATAGTAAATAAAGCAAAGCTCAC AAGAATCAACCAACCAAAAACCCACGTTCTCCTCTTACTTCTGGTCAAAGTTTTACTCAAAAAAGCACCACTGACACTGC TACCACTGCCTCAAAGACCAACCCTTTACAGTTCAACTTCAACATCTGGACCAATCAAAACAGATTCTCACACCACCACC ATTGTTTTTTTCTTCTTATCATTATCATCATCATACCTTTTTTTATTTCAACTCTTCAAAATCAGGGTCATTGTGACTTG AGTCTGTTCAATCATTGACTGTAACTAAACTCCCCAAAGTTCAGACCTTTTTCCTGTTCTTATCCTATTGTTGCTGAAAT TTTTTCATGGGGTGTTGGAGAATCTCGTGTTTATAGCTTCATCATAACGCATGCTCCATTATCTTTTGGTTTCTCGTGCT TCTTGTTGGTGCTTTTTCAGTGTCTAGAAGCTTCTATTTGGTTGGCTCACTTTTCAATGAACTGGGGTTGCTTCAAAATT TTGTCTTGTTTAGATTAAACGAACAGCAGATTTTTGTCCAAAAAAAAAAGAACAGCAGATTCAGTGATTGTTTCTGTTAC TGTTCGATCCGTGTCTTGTGTTTGGTACAAAAATGATTGTTTCTAAAAGAGAAGAGCAGATTATGTTGCCTTCAGAAGGT GCAAGTGAGGTTTCAAAGTCAACTTCATTGGATTTGAACCCAGATTCCCTTGATGGATCCACACCTGGTTCCACTGATTA CACTGATGTAGGGGTTGTGCCAGAGCACCAGAAGGATGAGCTTGAGCACTTGATATCAAATTTAGAGAGTATAAAATATA TGAAGGCACTTTTGTTTTTGGCTTGTGGGTTTGAATCTGTGAAGTGAATGTTACTAATTTTGTTTTGCTTGATCTGATTT GATTGTGTAGGGGAGGTTGAGCAGCTGAGGCTCAATCAGAGGATAGTGGATGATAAGAGGAGAGAAGCATTGAGTAAGAT ATTGGATATCAAAGGTAATGATAATAGTACTAATTGGAGGTTTTTGTTGTTATGCATTGGAATTTTGATGATATTGTAGT ACATCTTTTCAAGGGTTGAAGAATTTCATTTTGCTATCCAGGGAGCATTCGAGTATTTTGTAGAATTCGACCAATTTTGA TACCGGATAAGAGGAAAATCTCTGAACCAGTATCAGCTGGATCAGAGAGAATTCGGGTTAAGTTGGGAGGAACAAGGAAA GATTTTGAGTTTGATAAGGTTTTTCCTCAAGAATCAAGCCAAGGCTAGTATTAAACGTTAATGTGTTTACCAACTTTTGC TATCTAATTGTAGTTCCATGTTCTAATGGAGGGCGGGTATGTGTGTCATTGTTTGAATCTCTACAGAAAATGTTTTTGTT GAGGTTGAGCCAATTCTAAGATCTGCAATGGACGGACACAATGTGTGTGTTTTTGCTTACGGTCAAACGGGCACAGGCAA GACATTCACCATGGTTAGTCTAGTCAATTCTAATTTGTGTTGCTATTTAAGTTATGCTTAGTGTGTGTTTGGATATCAGT TGAGATGTAAATTGACTTTTAAGTTTTAACCTGATCCAATGATGCACTAGTGACAACATTGCTAATGTATGGTGGCTCCT GTAACAATCTTAATTAGGATGGTACAAATGAGCATCCGGGAATCATCCCCCGTGCTCTTGAAGAGCTCTTTCGTCAAGCT TCTATGGATAATTCGTCTGCATTCACTTTTTCAATGAGCATGTTGGAAGTTTACATGGGCAATGTCAGGGATCTTCTGGC TCCAAGACCTTCTGGTAGATCATATGAACCTATGACAAAGTGGTAACTTTTTTTTCCCTCCTTTTTCACTTATGTTTTTT CAATGTATGATTGAATTTCATAGAGTGATCTATCTGAGACTTTGGTTCATCACCTCACTCATTTTACAGCAGTCTCAACA TCCAAATAGATCCAAAAGGATTGGTTGAAATTGAGGGTCTCTCAGAAGTGCAAATCTCTGATTATGCTAAAGCCAGATGG TTGTACAACAAGGGCAGAAGGTTCAGATCCACCTCATGGACTAATGTCAATGAGGCATCAAGCAGGTCACACTGGTGGGT TATAGGTCTAATTACATTGTCTAAGCTAATTTCATGGGTTTCTTAGCTTGATAGTTACATTATCTATTTAGCTTCATATA TCTAGCTTGACAAGGATAAGCATATTTAGACGCGGGGATGCTTCAGAAGCCAAAAGCGAAATAAGTAAATTGTGGATGGT TGATCTTGGAGGCAATGAACGGTTACTGAAAACTGGAGCCAGAGGAGTAACACTTGATGAGGGCCGGGCTATCAATCTTT CTCTTTCAGCTTTAGCTGATGTCATTGCAGCTTTGAAGAGGAAGAGGGGTCATGTGCCTTACAGGCAAGTATTCTTATGG TGTTAATTTATCAAGTTTAATTGTGTCCTTTTAGTCTATGTTTGGATATTTGTTGGCACGCAAACAGATTTTAGCACTCA CTTTGGGGTAAAAAGTGAACAGAACTTTTTTTATGGATCGAAGTGAACGTTTCGTTCACATTGCACTGAACTGATATCCA AACACACACTTAGCCTTTAGTTGTGATATGTGCTTTGATAAGCTTATAACTACAGAGATGAGTCTTTTTTACTGCTGCAG GTTTTTATGCCATCCCAATTATTGTTTCTTTCTAGACAATCAAAGTATCAAATAGTGACGATTTAATGCTTACTTTGTTT GCAGAAATAGCAAGCTGACACAAATACTGAGAGATTCTCTTGGTATGATACTTCTCTCTTCTCCTAATTGCAAATTCATT TGTATTGGAATATTTTTCACTTATTGATATTTGACTTATTGAGAGTAGAGGAAGAACAGTGAGCCATTTGTCAATATCTG CATGAAATGTGCATGTACCAATGTGATATGCATAGTTCAAGATTTATGTTCAGACTTTTTTTGTTTTCTAAAATATAAAA TGCCTAATCTTTATAATCAAATACTTAAGGTGATGGCTCAAAGGTCTTGATGCTTGTGCATATAAGCCCTTCAGAAGAAG ATGTTTGCGAGACAATCTGTGCTTTGAATTTTGCAAAGAGGGCAAGAGCAGTAGAGTCCAATAAAGAAGTACAAGTGGTA AACTTACTTAAATTTATCTTAAACCAAAGTTCCTCAGTGGGAACTGCTTGAAGATTGCTAACTGCATGCATGTATTGTAG GAATTGAAGAAGCAAAAGGAAAAGAAGATTATGGAGCTTGAGGAAGATATTAAGGAAGCTGAAAAGCAACGTCAGTATTT AAGGGATCAAATACAGAATGTTGAGTTAAAGCTAAAAGAGAGTAAAAAGATATTTTCAACCACATATACTCTTCCAGAAA GGGAAGACATGGAAACCTCTATTAGCCCCAAAGATGATGTCAAAGAGGTTAATGAAACCCCTAAAGCATCTCATAAGTGT ATTAAAAGAAGTTTCTCCAATTCAGTGCCTCGGTTCATGAATTCAACTGCTGCTAGTCGCCAAAGGCAAAGTGCTGCAGA ACAGGAACTTATTGTGAAATCAAAAGGTTTAAGATCTGTGGTCGCTAGAAGTTCAATCCAGTTTCCATGTTCCCAATCAT TAAGTTACTCAGATCTCCGCGTTAAAGCAATGCTGCGAAGTTCTCATGGAAAATCCCGGTATGCTGAAACAAATACTATT CCCACAGAAAGGCCTAAATGCAATGAGTTGGATTCGAAAGTGGTTACTCCTCGAAGCAAGATGGTTACATCATCTGATCC AAACTTGAGAGTTACATTGTGTCATCATAGAAGAAGGATGTCTAATCTGATCTAAGGGTTAAGTGACATCTTAGTTGCAG AATGCAGATACTTTAATGTTGTGGAGTGGTTGCATGTTTACCTTCTTTCAGTTTGTATTTTCTTTAACAAATTGTAGCGA GAGTGTGGTGTTAATAGGTGTGTTTTCTGGGGCTGTTAGTGTTTGGGATCTGTTAACTGTTTAACATGGTCATTCTCAGT TTTTGAGCTTGTTGGGTCTTGTTAGTCATTTGATTATGAGATTATATAGCAATTTGAGGTGACTAACTATTACTGAAGTT TGTCTTGACTTTTATATGAATACAAACAAACAGTTACTTGGCCTTTACTATTAGCATATTTGGATTAGCTTATTTTTGGT CATGGTTAATTATGACACTCAGATGTTATTCACAAAAGCTTTTTC
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0216300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCTTGTGCATATAAGCCCTTCAGAAGAAGATGTTTGCGAGACAATCTGTGCTTTGAATTTTGCAAAGAGGGCAAGAGC AGTAGAGTCCAATAAAGAAGTACAAGTGGAATTGAAGAAGCAAAAGGAAAAGAAGATTATGGAGCTTGAGGAAGATATTA AGGAAGCTGAAAAGCAACGTCAGTATTTAAGGGATCAAATACAGAATGTTGAGTTAAAGCTAAAAGAGAGTAAAAAGATA TTTTCAACCACATATACTCTTCCAGAAAGGGAAGACATGGAAACCTCTATTAGCCCCAAAGATGATGTCAAAGAGGTTAA TGAAACCCCTAAAGCATCTCATAAGTGTATTAAAAGAAGTTTCTCCAATTCAGTGCCTCGGTTCATGAATTCAACTGCTG CTAGTCGCCAAAGGCAAAGTGCTGCAGAACAGGAACTTATTGTGAAATCAAAAGGTTTAAGATCTGTGGTCGCTAGAAGT TCAATCCAGTTTCCATGTTCCCAATCATTAAGTTACTCAGATCTCCGCGTTAAAGCAATGCTGCGAAGTTCTCATGGAAA ATCCCGGTATGCTGAAACAAATACTATTCCCACAGAAAGGCCTAAATGCAATGAGTTGGATTCGAAAGTGGTTACTCCTC GAAGCAAGATGGTTACATCATCTGATCCAAACTTGAGAGTTACATTGTGTCATCATAGAAGAAGGATGTCTAATCTGATC TAA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0216300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLVHISPSEEDVCETICALNFAKRARAVESNKEVQVELKKQKEKKIMELEEDIKEAEKQRQYLRDQIQNVELKLKESKKI FSTTYTLPEREDMETSISPKDDVKEVNETPKASHKCIKRSFSNSVPRFMNSTAASRQRQSAAEQELIVKSKGLRSVVARS SIQFPCSQSLSYSDLRVKAMLRSSHGKSRYAETNTIPTERPKCNELDSKVVTPRSKMVTSSDPNLRVTLCHHRRRMSNLI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24115:SF835
1 237 237 1.3E-34 –
Gene3D
G3DSA:1.20.58.1980
1 79 79 1.3E-8 –
ProSiteProfiles
PS50067
1 28 28 12.639
IPR001752
PANTHER
PTHR24115
1 237 237 1.3E-34
IPR027640
Coils
Coil
24 73 50 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003777
Molecular function Microtubule motor activity Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0007018
Biological process Microtubule-based movement A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.
Subterm of
GO:0008017
Molecular function Microtubule binding Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0216300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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