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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0216300 |
| Transcript ID | LotjaGi5g1v0216300.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinesin, putative; TAIR: AT5G27950.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q8W0Y9|KN14U_ARATH Kinesin-like protein KIN-14U; TrEMBL-Plants: tr|A0A151U570|A0A151U570_CAJCA Kinesin-like protein KIFC3; Found in the gene: LotjaGi5g1v0216300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:52208395..52213540) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTATCATCAATATAATAATTATGTTGGAGGCAATACAAAATGTGCTCCTTATATACAGGAGCATGCAATGGGAAGCC AAGTAACCAATGGGCCAAGTCCATGGTGACCTAGATGCTAAAATACTAACTCATATTCTAACATATTGGGTCACAAATGT AAAACTCAATCTTAAATCGTATATGAGCCGAAATACATGCTCTAAAAACCTAAGTTAAACAAGCCTAAACCTAAATTACT TAAAGTCCCATATAAAATCTCAAAAACAAAACACGAAAGGTAATACCGAAATTAGGAAAAATACTAGCTATAAGAGCAAA GTTGAAAGTAAAGTCTTGGAAGAAGATTCTGACAAGCTCTCCATGAGGGATATCACCTAAGGTCCTCCCTCCATATGCAA AGATACATCACTTTCCCGGATCATCTACATCCTTCTACAATTAAATCTAGAGGTCGGAATTTAATAAAATTTCAACTAAA AGTTTGTTTTAATTTGTGAATCGTAGAGGATCGGGATCCTTTCCTCAAACCTAATTACGCTTTTAATTTCTGATATATCT TCCTTTAGTTGATTTATTGAAGCATCTTTTAACCGCAAAAAATATAGAATTAATGTGGTAAAAATCTGAAATTGAAGTTA ATTGTTTTCCTTCCAACTCAAAACTCTAATTCCAATTCACATATTAATAAACACTATCTTCTCTTCTCATATTCCCTGTT TTCATCTTCTATCTTCACAGTTTCTCTCCAACACCCAAACATACCATGTTCAGCCTCACCTGCACTTTGACTTTTGTTAT CCCTCAACCTTCTCCTCCTCCCTACCATCCCTAATATTAGGCACATCCTCATTTTCTTCACCCACCTTACACTTCCCATT TCCATCCAACTTATTCCCCCTTACTAGTATACTCATTAATCCATCATTTATGTGAATGTATAAAACAAAACCATTACACA AATTAAGAAATTTGATAGTAAATAAAGCAAAGCTCACAAGAATCAACCAACCAAAAACCCACGTTCTCCTCTTACTTCTG GTCAAAGTTTTACTCAAAAAAGCACCACTGACACTGCTACCACTGCCTCAAAGACCAACCCTTTACAGTTCAACTTCAAC ATCTGGACCAATCAAAACAGATTCTCACACCACCACCATTGTTTTTTTCTTCTTATCATTATCATCATCATACCTTTTTT TATTTCAACTCTTCAAAATCAGGGTCATTGTGACTTGAGTCTGTTCAATCATTGACTGTAACTAAACTCCCCAAAGTTCA GACCTTTTTCCTGTTCTTATCCTATTGTTGCTGAAATTTTTTCATGGGGTGTTGGAGAATCTCGTGTTTATAGCTTCATC ATAACGCATGCTCCATTATCTTTTGGTTTCTCGTGCTTCTTGTTGGTGCTTTTTCAGTGTCTAGAAGCTTCTATTTGGTT GGCTCACTTTTCAATGAACTGGGGTTGCTTCAAAATTTTGTCTTGTTTAGATTAAACGAACAGCAGATTTTTGTCCAAAA AAAAAAGAACAGCAGATTCAGTGATTGTTTCTGTTACTGTTCGATCCGTGTCTTGTGTTTGGTACAAAAATGATTGTTTC TAAAAGAGAAGAGCAGATTATGTTGCCTTCAGAAGGTGCAAGTGAGGTTTCAAAGTCAACTTCATTGGATTTGAACCCAG ATTCCCTTGATGGATCCACACCTGGTTCCACTGATTACACTGATGTAGGGGTTGTGCCAGAGCACCAGAAGGATGAGCTT GAGCACTTGATATCAAATTTAGAGAGTATAAAATATATGAAGGCACTTTTGTTTTTGGCTTGTGGGTTTGAATCTGTGAA GTGAATGTTACTAATTTTGTTTTGCTTGATCTGATTTGATTGTGTAGGGGAGGTTGAGCAGCTGAGGCTCAATCAGAGGA TAGTGGATGATAAGAGGAGAGAAGCATTGAGTAAGATATTGGATATCAAAGGTAATGATAATAGTACTAATTGGAGGTTT TTGTTGTTATGCATTGGAATTTTGATGATATTGTAGTACATCTTTTCAAGGGTTGAAGAATTTCATTTTGCTATCCAGGG AGCATTCGAGTATTTTGTAGAATTCGACCAATTTTGATACCGGATAAGAGGAAAATCTCTGAACCAGTATCAGCTGGATC AGAGAGAATTCGGGTTAAGTTGGGAGGAACAAGGAAAGATTTTGAGTTTGATAAGGTTTTTCCTCAAGAATCAAGCCAAG GCTAGTATTAAACGTTAATGTGTTTACCAACTTTTGCTATCTAATTGTAGTTCCATGTTCTAATGGAGGGCGGGTATGTG TGTCATTGTTTGAATCTCTACAGAAAATGTTTTTGTTGAGGTTGAGCCAATTCTAAGATCTGCAATGGACGGACACAATG TGTGTGTTTTTGCTTACGGTCAAACGGGCACAGGCAAGACATTCACCATGGTTAGTCTAGTCAATTCTAATTTGTGTTGC TATTTAAGTTATGCTTAGTGTGTGTTTGGATATCAGTTGAGATGTAAATTGACTTTTAAGTTTTAACCTGATCCAATGAT GCACTAGTGACAACATTGCTAATGTATGGTGGCTCCTGTAACAATCTTAATTAGGATGGTACAAATGAGCATCCGGGAAT CATCCCCCGTGCTCTTGAAGAGCTCTTTCGTCAAGCTTCTATGGATAATTCGTCTGCATTCACTTTTTCAATGAGCATGT TGGAAGTTTACATGGGCAATGTCAGGGATCTTCTGGCTCCAAGACCTTCTGGTAGATCATATGAACCTATGACAAAGTGG TAACTTTTTTTTCCCTCCTTTTTCACTTATGTTTTTTCAATGTATGATTGAATTTCATAGAGTGATCTATCTGAGACTTT GGTTCATCACCTCACTCATTTTACAGCAGTCTCAACATCCAAATAGATCCAAAAGGATTGGTTGAAATTGAGGGTCTCTC AGAAGTGCAAATCTCTGATTATGCTAAAGCCAGATGGTTGTACAACAAGGGCAGAAGGTTCAGATCCACCTCATGGACTA ATGTCAATGAGGCATCAAGCAGGTCACACTGGTGGGTTATAGGTCTAATTACATTGTCTAAGCTAATTTCATGGGTTTCT TAGCTTGATAGTTACATTATCTATTTAGCTTCATATATCTAGCTTGACAAGGATAAGCATATTTAGACGCGGGGATGCTT CAGAAGCCAAAAGCGAAATAAGTAAATTGTGGATGGTTGATCTTGGAGGCAATGAACGGTTACTGAAAACTGGAGCCAGA GGAGTAACACTTGATGAGGGCCGGGCTATCAATCTTTCTCTTTCAGCTTTAGCTGATGTCATTGCAGCTTTGAAGAGGAA GAGGGGTCATGTGCCTTACAGGCAAGTATTCTTATGGTGTTAATTTATCAAGTTTAATTGTGTCCTTTTAGTCTATGTTT GGATATTTGTTGGCACGCAAACAGATTTTAGCACTCACTTTGGGGTAAAAAGTGAACAGAACTTTTTTTATGGATCGAAG TGAACGTTTCGTTCACATTGCACTGAACTGATATCCAAACACACACTTAGCCTTTAGTTGTGATATGTGCTTTGATAAGC TTATAACTACAGAGATGAGTCTTTTTTACTGCTGCAGGTTTTTATGCCATCCCAATTATTGTTTCTTTCTAGACAATCAA AGTATCAAATAGTGACGATTTAATGCTTACTTTGTTTGCAGAAATAGCAAGCTGACACAAATACTGAGAGATTCTCTTGG TATGATACTTCTCTCTTCTCCTAATTGCAAATTCATTTGTATTGGAATATTTTTCACTTATTGATATTTGACTTATTGAG AGTAGAGGAAGAACAGTGAGCCATTTGTCAATATCTGCATGAAATGTGCATGTACCAATGTGATATGCATAGTTCAAGAT TTATGTTCAGACTTTTTTTGTTTTCTAAAATATAAAATGCCTAATCTTTATAATCAAATACTTAAGGTGATGGCTCAAAG GTCTTGATGCTTGTGCATATAAGCCCTTCAGAAGAAGATGTTTGCGAGACAATCTGTGCTTTGAATTTTGCAAAGAGGGC AAGAGCAGTAGAGTCCAATAAAGAAGTACAAGTGGTAAACTTACTTAAATTTATCTTAAACCAAAGTTCCTCAGTGGGAA CTGCTTGAAGATTGCTAACTGCATGCATGTATTGTAGGAATTGAAGAAGCAAAAGGAAAAGAAGATTATGGAGCTTGAGG AAGATATTAAGGAAGCTGAAAAGCAACGTCAGTATTTAAGGGATCAAATACAGAATGTTGAGTTAAAGCTAAAAGAGAGT AAAAAGATATTTTCAACCACATATACTCTTCCAGAAAGGGAAGACATGGAAACCTCTATTAGCCCCAAAGATGATGTCAA AGAGGTTAATGAAACCCCTAAAGCATCTCATAAGTGTATTAAAAGAAGTTTCTCCAATTCAGTGCCTCGGTTCATGAATT CAACTGCTGCTAGTCGCCAAAGGCAAAGTGCTGCAGAACAGGAACTTATTGTGAAATCAAAAGGTTTAAGATCTGTGGTC GCTAGAAGTTCAATCCAGTTTCCATGTTCCCAATCATTAAGTTACTCAGATCTCCGCGTTAAAGCAATGCTGCGAAGTTC TCATGGAAAATCCCGGTATGCTGAAACAAATACTATTCCCACAGAAAGGCCTAAATGCAATGAGTTGGATTCGAAAGTGG TTACTCCTCGAAGCAAGATGGTTACATCATCTGATCCAAACTTGAGAGTTACATTGTGTCATCATAGAAGAAGGATGTCT AATCTGATCTAAGGGTTAAGTGACATCTTAGTTGCAGAATGCAGATACTTTAATGTTGTGGAGTGGTTGCATGTTTACCT TCTTTCAGTTTGTATTTTCTTTAACAAATTGTAGCGAGAGTGTGGTGTTAATAGGTGTGTTTTCTGGGGCTGTTAGTGTT TGGGATCTGTTAACTGTTTAACATGGTCATTCTCAGTTTTTGAGCTTGTTGGGTCTTGTTAGTCATTTGATTATGAGATT ATATAGCAATTTGAGGTGACTAACTATTACTGAAGTTTGTCTTGACTTTTATATGAATACAAACAAACAGTTACTTGGCC TTTACTATTAGCATATTTGGATTAGC
CDS sequence (LotjaGi5g1v0216300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTGTGCATATAAGCCCTTCAGAAGAAGATGTTTGCGAGACAATCTGTGCTTTGAATTTTGCAAAGAGGGCAAGAGC AGTAGAGTCCAATAAAGAAGTACAAGTGGAATTGAAGAAGCAAAAGGAAAAGAAGATTATGGAGCTTGAGGAAGATATTA AGGAAGCTGAAAAGCAACGTCAGTATTTAAGGGATCAAATACAGAATGTTGAGTTAAAGCTAAAAGAGAGTAAAAAGATA TTTTCAACCACATATACTCTTCCAGAAAGGGAAGACATGGAAACCTCTATTAGCCCCAAAGATGATGTCAAAGAGGTTAA TGAAACCCCTAAAGCATCTCATAAGTGTATTAAAAGAAGTTTCTCCAATTCAGTGCCTCGGTTCATGAATTCAACTGCTG CTAGTCGCCAAAGGCAAAGTGCTGCAGAACAGGAACTTATTGTGAAATCAAAAGGTTTAAGATCTGTGGTCGCTAGAAGT TCAATCCAGTTTCCATGTTCCCAATCATTAAGTTACTCAGATCTCCGCGTTAAAGCAATGCTGCGAAGTTCTCATGGAAA ATCCCGGTATGCTGAAACAAATACTATTCCCACAGAAAGGCCTAAATGCAATGAGTTGGATTCGAAAGTGGTTACTCCTC GAAGCAAGATGGTTACATCATCTGATCCAAACTTGAGAGTTACATTGTGTCATCATAGAAGAAGGATGTCTAATCTGATC TAA
Protein sequence (LotjaGi5g1v0216300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLVHISPSEEDVCETICALNFAKRARAVESNKEVQVELKKQKEKKIMELEEDIKEAEKQRQYLRDQIQNVELKLKESKKI FSTTYTLPEREDMETSISPKDDVKEVNETPKASHKCIKRSFSNSVPRFMNSTAASRQRQSAAEQELIVKSKGLRSVVARS SIQFPCSQSLSYSDLRVKAMLRSSHGKSRYAETNTIPTERPKCNELDSKVVTPRSKMVTSSDPNLRVTLCHHRRRMSNLI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 237 | 237 | 1.3E-34 | – | |
| Gene3D | 1 | 79 | 79 | 1.3E-8 | – | |
| ProSiteProfiles | 1 | 28 | 28 | 12.639 | ||
| PANTHER | 1 | 237 | 237 | 1.3E-34 | ||
| Coils | 24 | 73 | 50 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Microtubule motor activity | Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Microtubule-based movement | A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules. | ||
| Molecular function | Microtubule binding | Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers. |
Expression pattern of LotjaGi5g1v0216300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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