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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0217300 |
| Transcript ID | LotjaGi5g1v0217300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein DnaJ; TAIR: AT3G06340.1 DNAJ heat shock N-terminal domain-containing protein; Swiss-Prot: sp|Q9QYI4|DJB12_MOUSE DnaJ homolog subfamily B member 12; TrEMBL-Plants: tr|A0A1J7HZA2|A0A1J7HZA2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0217300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:52340663..52344052) extracted from Lotus japonicus Gifu genome v1.2.
ACTACACAAGAAAAAAAAAAAATAGGAGGAAGAAGAGTAGAAATCCAAAATTCCAATTTTTTCACTTTCCCGCTTTGTGT GTCTCTTTTTCCCTCTGAATCGCTGCTATAAAATATTTCACTTGCCGCTTTCAGTTCGCGGTCGTACTGTCTTCTTTCGT TTCTCGTCGTCGCAGTCTCAGAGAGCGACGGAGCCAGTTGCGTCGCGTTCGGAATCGGAGTCGGAGTCAGAGTCAGAGTC CGAATCGTCCAAGTAAGTTCCATTCTCTTCCCTCTTCTTGCTCAATAGGGTTCTCCTTTCGAAATTTCATTTCTAGATTT CGCTTTGCATCAATCAAATTCAGGATTTTGTTCACTACTTGGAAATTTACACCAAATGAGATAGCGTTTCCCCCAATTTT AACTGTCCAATCGTTTGATTCAAAATCTAACAAATGCTTACGAGTTTAGCTGATTGGTTAATTCAGTTACAGAATTTGTT ACTTAGTTAGGGTTTATCTGTTTGTAGTAGTTTTGACTGTATTAGGGTTTGTAATTCTCTATATTGGGTGTGAATGTGTT AAAATTAGGACTGTGATGTTGGAGAAATTGGGAGTGAATGTATTGAAGTTGTATGATAATAAGATGAAATCTCTATATTG ATGGGTTGGCTTAATTTTTGTGTTTAATTGATTTGTGTCAATCAGGTGGAAATTTTGCCCTATTTGTGGGATGTGAATAC AGAGAGTTTCACAACCTTTCTATGTGTTTGTGTGGTGTTATTGAGAAAAGCCTTTTGATATCGATTCACTACACACTTAC ACTAATCAGTAATCACCCATGGAGTGCAACAAGGAGGAGGCTGAGAAGGCTAAGCAAATTGCTGAGAGCAGAATGCAAAG AGGTGAATTTGTGGAGGCACTGAAATTTGCTCTCAAGGCCAAAAGGATGTATGCTGAACTTGAAAACATTGCTCAGATCC TTACTATCTGTGAGGTTCACAATGCTGCACAGAAGAAACTCTCTGCGGCTGTCATGGACTGGTATGGGATTCTTCAGACG GAAAGATTGGCTGATGAAGCGGCAATAAAGAAACAGTACCGGAAGCTTGCGCTGCTGCTGCATCCTGATAAAAACAAGTT CCCTGGTGCAGAAACTGCTTTCAAGTTCATTGGGGAGGCCTATAGGGTATTGAGTGACCCAGCCAAAAAAGCTTCACATG ACATTAAGTATGGAGTCTTTGTGAATCTTGCAGCACCTAAGGCTCAGACCTCATCCCATCACTCAAATGGGAATGTATCA GCAGCAAATCATCAGAAGGGTTCTTATCCAAATTCCAATTGTTGGAATCCCCATCAGTTGCCGCAGACATTCTGGGCATT TTGCAAACATTGTAAAGCTAAGTTCCAATACTTCCCTAAACTCTTAAATGCAGCCTGGCTCTGTACGAACTGTTTGAAAT CCTTTGCAGCTCCAACGCAGTGTCCACCAAAACCAGCCTCGGAAAGTAAAGTTGGAAAACCATGCGCTAGTGGAGTTGGT GCCCAATTTAAAGGTGAAAAGTGTAAAGGGATGAAGTCACAGACCACAGCAAATGCTGGAAGCAAGAGAATGAGGCAGTC AGCCCAAGTTTCAAGAGAAAGTTTCAACGCTGGGAATGGTGATGGTAAGAAAGATGCCAATGTTGGAGAAAATGATGTTG ACCCTTCAAGACTGAATGTTAGGAGATCTTCCAGGCAAAAGCAACATGTTTCATATGTGGAATCCCCTGAAGCTGGCAAA TTTCGGAGTCCTTCCAAAAAGCCACGACAAAACGGATCATTTGACACCAATGAAACTGAGAAAGAGAACGTGCCTACTGA TGACAATAATGGAGCTGGTTATGCTGCTGGTGTAGTTGATCAGAACAAAGAGGTGGGAAATAAAATAAGTAGCCCACCGG ATGAAACATCTTTAAGAAACAAAAGCAAATCTGAGCAATCTCAAGGAGAGAAAGTATTGGAGTCTGATCTTGATGTTAGA AGTTCAAAAGATGACAACTGCTCTCAATTGAATCCTGTGACCATTCCTGATACAGATTTCAATGATTTTGATAAGGATAA GGAAGAAGATTGTTTTGCTGTTAATCAATTCTGGGCAATTTATGATAGCACTGATGGCATGCCAAGATTTTATGCTCTTG TGAGGAAAGTGGCCACCCCTTTTAAGTTGAAGATTTCTTGGTTGGAACCTGACCCAGATGATGAAGGTGAGATAGATTGG CATGATGCAGAATTGCCTATTGCTTGTGGTAAGTTCAAACTTGGTGGTTCTGAGACTGTAACAGATCGTACTATGTTCTC TCATCAGATACAGTGCATGAAAAGAAGTTCCAAAGGTTCTTATTATATGGTATATCCCAAGAAGGGAGAAACTTGGGCAC TTTTCAGAGATTGGGATATCAAATGGAGTGCTACTCCAGAAAATTATTTGAAGAATGAGATTGAATGTGTTGAAATCCTA TCAGATTTTACTGAGAATGTTGGTATTGAAGTTGCTCACCTAGTCAAAGTAAACGGGTTTGTTAGTCTCTTTCAGAAAAC TGAGAAGAATGGAGTCAGTATATCTTGTGTTGGACCTAATGAGCTCTACAGGTTCTCACACCGTATTCCTTCATATAAGA CGACAGGTAATGAAAGGGAAGGTGTTCCAAGAGGATGTTTTGAACTTGACACTGCTGCATTGCCTACTTACTTCTTTGTC GTTGGTGATTCTGAAGATGCTGAAAGGGATCCTCAATCTTGGAAACATCACCAAAGGGACAGAACAAGTATGAACATTGG TCAACAAACTGTAGGTACTGTTGCTGCATGTTAGGTCAATGAGGAGTGAAAGCGCCTAAGAACTATGGGGAAGAGAAAGT GAAGGAGGGATGCTGAATTTGTGTTTTGATTACCAACAGTTTTTAGATGTTTTGTTTTCTGTGTATCTTTTGTACTGATC CTTCTGTGCATCTTTTTGTACTGATCCCCCTTGTATGATCTTGTATTGTGACTTGGTATTCCTTACTGTGTCTACATTCT TTTCCCCTCTGGGTTGTTGTTACCTTGACAGAAGAGTTCCTTGGCTCAAGGAATTAATTTCTATCATTATTAGCAAATAT CAATGGACAAATTCTTGTTTGTCCTATCTTTCATCTTTGGCACATGATTGTCTACGTGTGGTGCCTTTGTTTTTATCCTG TGATCCTTTTTATGTTAGGAGATCTTGCAAGAGGCCTGCTGTTTATTTGGCTACATTAGCTTCTTCATTTTTAGACCAAG TTTGGATGGAGGGGTACCTTTCTGGATTGCAATCCATATTGGTCTGAGATGTATTTCCTTTATCTATTGAATAAATTCCC TGGATTATGTTTTACAAAATAAGTCATCAC
CDS sequence (LotjaGi5g1v0217300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTGCAACAAGGAGGAGGCTGAGAAGGCTAAGCAAATTGCTGAGAGCAGAATGCAAAGAGGTGAATTTGTGGAGGC ACTGAAATTTGCTCTCAAGGCCAAAAGGATGTATGCTGAACTTGAAAACATTGCTCAGATCCTTACTATCTGTGAGGTTC ACAATGCTGCACAGAAGAAACTCTCTGCGGCTGTCATGGACTGGTATGGGATTCTTCAGACGGAAAGATTGGCTGATGAA GCGGCAATAAAGAAACAGTACCGGAAGCTTGCGCTGCTGCTGCATCCTGATAAAAACAAGTTCCCTGGTGCAGAAACTGC TTTCAAGTTCATTGGGGAGGCCTATAGGGTATTGAGTGACCCAGCCAAAAAAGCTTCACATGACATTAAGTATGGAGTCT TTGTGAATCTTGCAGCACCTAAGGCTCAGACCTCATCCCATCACTCAAATGGGAATGTATCAGCAGCAAATCATCAGAAG GGTTCTTATCCAAATTCCAATTGTTGGAATCCCCATCAGTTGCCGCAGACATTCTGGGCATTTTGCAAACATTGTAAAGC TAAGTTCCAATACTTCCCTAAACTCTTAAATGCAGCCTGGCTCTGTACGAACTGTTTGAAATCCTTTGCAGCTCCAACGC AGTGTCCACCAAAACCAGCCTCGGAAAGTAAAGTTGGAAAACCATGCGCTAGTGGAGTTGGTGCCCAATTTAAAGGTGAA AAGTGTAAAGGGATGAAGTCACAGACCACAGCAAATGCTGGAAGCAAGAGAATGAGGCAGTCAGCCCAAGTTTCAAGAGA AAGTTTCAACGCTGGGAATGGTGATGGTAAGAAAGATGCCAATGTTGGAGAAAATGATGTTGACCCTTCAAGACTGAATG TTAGGAGATCTTCCAGGCAAAAGCAACATGTTTCATATGTGGAATCCCCTGAAGCTGGCAAATTTCGGAGTCCTTCCAAA AAGCCACGACAAAACGGATCATTTGACACCAATGAAACTGAGAAAGAGAACGTGCCTACTGATGACAATAATGGAGCTGG TTATGCTGCTGGTGTAGTTGATCAGAACAAAGAGGTGGGAAATAAAATAAGTAGCCCACCGGATGAAACATCTTTAAGAA ACAAAAGCAAATCTGAGCAATCTCAAGGAGAGAAAGTATTGGAGTCTGATCTTGATGTTAGAAGTTCAAAAGATGACAAC TGCTCTCAATTGAATCCTGTGACCATTCCTGATACAGATTTCAATGATTTTGATAAGGATAAGGAAGAAGATTGTTTTGC TGTTAATCAATTCTGGGCAATTTATGATAGCACTGATGGCATGCCAAGATTTTATGCTCTTGTGAGGAAAGTGGCCACCC CTTTTAAGTTGAAGATTTCTTGGTTGGAACCTGACCCAGATGATGAAGGTGAGATAGATTGGCATGATGCAGAATTGCCT ATTGCTTGTGGTAAGTTCAAACTTGGTGGTTCTGAGACTGTAACAGATCGTACTATGTTCTCTCATCAGATACAGTGCAT GAAAAGAAGTTCCAAAGGTTCTTATTATATGGTATATCCCAAGAAGGGAGAAACTTGGGCACTTTTCAGAGATTGGGATA TCAAATGGAGTGCTACTCCAGAAAATTATTTGAAGAATGAGATTGAATGTGTTGAAATCCTATCAGATTTTACTGAGAAT GTTGGTATTGAAGTTGCTCACCTAGTCAAAGTAAACGGGTTTGTTAGTCTCTTTCAGAAAACTGAGAAGAATGGAGTCAG TATATCTTGTGTTGGACCTAATGAGCTCTACAGGTTCTCACACCGTATTCCTTCATATAAGACGACAGGTAATGAAAGGG AAGGTGTTCCAAGAGGATGTTTTGAACTTGACACTGCTGCATTGCCTACTTACTTCTTTGTCGTTGGTGATTCTGAAGAT GCTGAAAGGGATCCTCAATCTTGGAAACATCACCAAAGGGACAGAACAAGTATGAACATTGGTCAACAAACTGTAGGTAC TGTTGCTGCATGTTAG
Protein sequence (LotjaGi5g1v0217300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MECNKEEAEKAKQIAESRMQRGEFVEALKFALKAKRMYAELENIAQILTICEVHNAAQKKLSAAVMDWYGILQTERLADE AAIKKQYRKLALLLHPDKNKFPGAETAFKFIGEAYRVLSDPAKKASHDIKYGVFVNLAAPKAQTSSHHSNGNVSAANHQK GSYPNSNCWNPHQLPQTFWAFCKHCKAKFQYFPKLLNAAWLCTNCLKSFAAPTQCPPKPASESKVGKPCASGVGAQFKGE KCKGMKSQTTANAGSKRMRQSAQVSRESFNAGNGDGKKDANVGENDVDPSRLNVRRSSRQKQHVSYVESPEAGKFRSPSK KPRQNGSFDTNETEKENVPTDDNNGAGYAAGVVDQNKEVGNKISSPPDETSLRNKSKSEQSQGEKVLESDLDVRSSKDDN CSQLNPVTIPDTDFNDFDKDKEEDCFAVNQFWAIYDSTDGMPRFYALVRKVATPFKLKISWLEPDPDDEGEIDWHDAELP IACGKFKLGGSETVTDRTMFSHQIQCMKRSSKGSYYMVYPKKGETWALFRDWDIKWSATPENYLKNEIECVEILSDFTEN VGIEVAHLVKVNGFVSLFQKTEKNGVSISCVGPNELYRFSHRIPSYKTTGNEREGVPRGCFELDTAALPTYFFVVGDSED AERDPQSWKHHQRDRTSMNIGQQTVGTVAAC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 212 | 212 | 1.2E-210 | – | |
| PANTHER | 1 | 212 | 212 | 1.2E-210 | – | |
| SUPERFAMILY | 63 | 130 | 68 | 2.49E-20 | ||
| Gene3D | 64 | 168 | 105 | 5.5E-21 | ||
| SMART | 66 | 123 | 58 | 1.1E-23 | ||
| ProSiteProfiles | 67 | 131 | 65 | 15.884 | ||
| Pfam | 67 | 128 | 62 | 1.7E-20 | ||
| CDD | 67 | 120 | 54 | 2.49957E-20 | ||
| PRINTS | 69 | 87 | 19 | 1.2E-12 | ||
| PRINTS | 87 | 102 | 16 | 1.2E-12 | ||
| PRINTS | 103 | 123 | 21 | 1.2E-12 | ||
| PANTHER | 231 | 642 | 412 | 1.2E-210 | – | |
| PANTHER | 231 | 642 | 412 | 1.2E-210 | – | |
| MobiDBLite | 241 | 407 | 167 | - | – | |
| MobiDBLite | 243 | 270 | 28 | - | – | |
| MobiDBLite | 279 | 295 | 17 | - | – | |
| MobiDBLite | 372 | 397 | 26 | - | – | |
| Pfam | 407 | 612 | 206 | 3.3E-75 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0217300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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