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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0219600 |
| Transcript ID | LotjaGi5g1v0219600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Myb/SANT-like DNA-binding domain protein; TAIR: AT2G24960.2 Myb/SANT-like DNA-binding domain protein; Swiss-Prot: sp|Q9FFJ8|LIMYB_ARATH L10-interacting MYB domain-containing protein; TrEMBL-Plants: tr|A0A067JI30|A0A067JI30_JATCU Uncharacterized protein; Found in the gene: LotjaGi5g1v0219600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:52609510..52616036) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAATTAGTGCTTGAATTTATAAGCGACATTAATGGTTTCTCAAATGGATTAAAATCAAACTCGTTTACAAACTAATT TAGTCATGAACCCTTTAACAAATTCAACAACTATGGGTACGAACAGTGTCTGCTGCAGCTCACATGGAGAAATTCAAGGT ACATACCAATTCCATTTCAGATTCAACTCTTACACCCTCGATTCCCGTTTATGAATTTCAGTTACATGCAAAATCCGAGC TTAATTTCATGATTTCAGTGATTTTTTTTTGTAGTTTTTTTGACAATTGATCATGCTTTCATTTCCAGTTTTTTCATTGT TCATACAAGCTTAGTCGCAATTGGTTATGGCAGTTAGGCTGTTACTAGGTTGATTCTTCATCAGTTAGCAAAGCTTTGAC TATCTTGTATATAGCAAGAGAAGAGTGTTACAATGGGGAGCCAGATACCCAGAGGGAATGTGAATGTTCCATCAGGGACA AATTGGACACCTGCAATGGAAAACTATTTCATTGGTCTGTTGTTGGATCAGGTGCATAAGGGCAACAAGGTGAGCTATAC TTTCAACAAACAAGCTTGGAATGAAATGTTGGCTTTGTTTAATGCTAACTTTAGGTCTCCTCCTCATGATGTTAATCTAC TCAAAAACCGGTACACGACTTTGTCGATGAAGTTCAACGACATCAAGAATCTTCTTGACCGAAATGGGTTCTCTTGGGAT GAGACTAGTCGAATGGTAGTTGCTAGTGATCGTGTTTGGGATGCCTATATCAAGGTGCGCGTTATGCTTGTTTGCGCTGT GTTCTCTAATTGTTTGACTGTTTTGCAAAATGAACTGATTAGCTGGAATGCAGGTACACCCACATGCGCAAGCCTACAGA GGTAAAGAACTTGTGGATATTAAAGATTTGTGTTTGGTATATGCACATGAAAGAACAGATGGAAGATATAGCTTGTCGAG TCATGATGTCGACTTTGGTGATGATGAACAAGTGGTCAATACTGGTAGTGGTAGGTTTCTATCTGCTTCTGGATTGCTGT TCTGATTGTTGTATGTCATATAGTCATTTAAGAATGAAGATGTATATTGTTCTTGTGGCTGGAAAATTTTGGGAGTCTTT TTTTCTTCTGAACACATAGTGTTGTATAGTCATTGTTGTTTTTGCTGAGCACTGAGTCTTGTTTATCCATAACTGCATAT CTGTTTTCTGATTTGTTTAGTGGACTTTGTGAATCCATAACCAGTAGCATTTTCCCCTCCCCTCTTTCCATGAAGGGTTA GGGAATTTATTATAAAGACATTCCATTTTGCAGTAAAGCATTAGGAACTATTAGTTTTGGATATTTGCTGACTTTTGGGG AAATAAAGCATGACCGAGTGCAACTTTTTTATTGTTGATCAATTTACAACTTAAGAAAGTGTTGTCTAGTTTGAACAAGT AATGATTAATTGGAACTTCGAATTGTAGGAATTGCTGCTAGAACTCCAGATACATATTGGACATTAGCAATGGACTGTTA TTTTGTGAAGCTTATGTTAGGTCAACTTAAAAATCACAATATGGTCCGTAATGGACTCTGCAGAAAAGCATGGAACCATG TGCTTAAGTTTTTCAACAAAAAGTTCGATGCCCAGTATGATAAAAGCTTCTTAAAACAACATTACAGTAAACTTGGGAAT TACTATACTGATTTAAAAAATTTACTTGAGTTGAAAGATTTTTCATGGGATGAAAATCAACAAAGGATTGTTGCTGATGA TGATGTTTGGGACAACTACATCAAGGTATACTATTATGTTGATTATGACATTGGAATTTACTTTTATTTCAAATTTTACA TTGAAATGTTTATGCAAGAACACCCACATGCAAGTTATTATAGGAACAAGACCCTGGTTAACTATCCAGATCTGGGGTTA ATATATAGCAATGCAATGTGCAATTACATGCTGATGCAGGAAGGTATAAACAATAAGGATTACTTTTTATAACTCCAGAT CAGTGAACTTCATCTCAATTCTTATCACAGATTCCAACCATTTATAGCTTATAATTATGTTTTGGATTATTTAGTTAATG TCAATATCTGACATTGGACATTGTATAGAACATATTTGACGCTAAAATAGGTAATATGTTAAAGTAGAAACTGTTTTTTA GATCTCAATTCTTTATCAAATACTAGAATTTGTGTTTTGTGATCTTGCTTTTCCCTTGCAGGTTGTCTATACTCTATATA TTGAAACCCATGAGAATTTTAGTCAACTTCCAATTTCTAAAACCATAAAAATGTTTTGATGGGTGATTTCCTCTAATTAG GTTTCTTTTTGTCTTTAGGCAGAGAAGGTGTGTACCACTCCTCGGATGGTGATGAATATGTGAGAGGAAGTTGGACCTTA CTCATGGACTGTTATCTTACTGACTTGCTGCTAAATCAGGCACTTAAAGTTAATAATTCCAGTCATGATTTCACCTTTGA AGCTTGGTGTGATATTGTCACATCATTCTGCGTTAAATTTGGTTCTCACTACACTAAAGAGGATCTAAAGAATAGACAGA AATATTTGGAAAAACATTTTGATGACTTAAAAGTTCTCACCAAGCAGTCTGGCTTTGCTTGGGATGGGAAGCAAGAAATG GTAATGGCTGAAGACGAAGTATGGAACTCTTACACCAAGGTGAACTGCAATCTATACTTTTTGTTTTGTCTAGGATGCCC TTTTCATGTATTATTATAATTTATGTGAGATAAATGCAGGTGCATCCTGATGCTTTGTTATATAGAAATAAATTTGTTCC AATCTATCACAAATTATCCTTGATATATGGCGGTGAGTTTTCTGAGGAAAGGTGCAGCCATTCTTGTTGCAGCATAGATC ATATTTGCAATGGACCAATTTCAACAATAGGTATTCTCTTGTTTTCCTCTAAATTATGCAGTGGTGGAAATTTTGAATCA TCTTCAATTGGTGGGAGTAATTTATTTTGATTTATGGTTTGGAGGAGTTGATGAGGACATCCAAGATTGTGCGATAGATT ACTTTTCAAGGGTAGATGGGACACCTTACATGGACCGTTATCTCATTGACCTTATGGTTGAGGAGGTTCGGAGGAGGAAC AAGATTGATTATGTTCGCAACGATCAAGCATGTTTAGATATGGTTGTGATGTTCAAGGAAAGATTTGGTATACAATTTGA TAAAAACTACCTCAAGCATTGTTGTAAAGGTTTGGAAAAGTTATACCACAAGATGAGAAGTCTTCTTGAAGAGAGAGGGT TCTCATGGGATGAAACACGGCAAATGATCACTGCATGTAATGGTGTCTGGGATGCTTATATTAAGGTGTGTGATACTTAT TCTTTCGTCGTACTTCCAAGCTTCGATTTTTGGTGCCTGATCCTGCAATATACAGGAGCATCCTGATGCAAATTCTTACA GAAATCACCAAAAGCCAAATTATAATGATCTATGCTTGATTTATGGAAGTTCAGATACTGAGTTGACATGTAACCCAGCT AATCAAAATGTTGGATACAATGATTGCAGTAAGTTTTCATTGACTATCTTACTGTAGTTTTGTAGTCTAGAGTACTTTCT GTTACAACTTTTCGTAGTTGATTATGCTTCACAATAGGGGGGATATAGAGATAGAGATAGCTCACCCTTTAAATGTATTT GTGATCAATAGAATATTTCACTGAACATGCCAAAGTATTTAAAAGGCTATTGTTAGTGCCCTTTTCCTTTATAACATATT GTTGATATCTTTTTGCAGGCATCATATGTCAAAAACTTCACTGGAGAAGTAATTGGACCCCACCAATGGATCGTTATTTT ATGGACTTGATGTTAGAGGAAGTGCGAAATGGAAGCATGGTTGATCATAAGTTTGACAGATTAACCTGGAGAGATATGGT GGCAAAATTTAGTGCAGAATTTGGGTCCCAGTATGATGAAAATGCCTTGCAAAGTCAATATATGACTCTGAGAAAGAGAT TCAATGATATGAAGACTCTGCTTAACCAAAGAGGGTTTGCCTGGGATGAAATGCAGCAAATGATAAGAGCTGATGAAAGA TTGTGGGATTCTTATGTGAAGGTGTGTCTTCCAAGCGAACTAGTTTTGCTTTGTTTTTCTTTTGGTGTTTTTGGACATTT TGATGCCCATCTCAGGTTTCCTATAATTTTGCAGGTGCACCCTGCTATGAATGCATATTGCAATAGAACTCTTCCAAGTT TCAATGATTTGTTTTTGATATATGAAAATACAAACTGTGGCCGAAATGAACACTATTCTGGCTTCTCTAGGGGTTCTTTG GATAATGGACTGAGTACTGGTATATTCTTCATCTTTCCATTTGTAGTTTCTGGCATAGCTTTCCCCTGTATTCTGGTAGA AGTTTTTTATTCTTCTGGAAGGACATTTCAAAGCAATTGTGTTGATTTATTTGAAAGAGTACTTGGGACTGAGTCATTAC TTTAACTGTTAATAGATTTCATTATAAATGTAGACTATCTTACGCAATAATTGTAATTACTGTTTCTGCTTTAATATATA GATGTTTGGGAGTACAACCATTCGCCTCCTAGCGTTGAACCTATGAGGATGGCTTGGACAATGCAAATGAACCGTTATCT GATTAGCCTTTTATTAGACCAGTTGAATAGAGGGAATAAGATTGGTGTTACATTCAGTAAGAAAGCTTGGTCCAGGATGA CTGCATCATTCAATAGAGAGTTTGGACTACTTTGTGACAGAGATGCCCTAGAAAATCAGTATTTGGGTCTCGTTAGAGTC TACAGAGATGTGACATATCTTCTAAATCAAAATGGCATTGCCTGGGGCAAAATCCAGCACACGTCAAGGGGAAATGATGT TTGGCAGTCTTATTTTCAGGTGCACTATGTTTTAATTGGTTATATATGGGGTGTTTCCCTTTTTTTAATGGCAACATGTA CATAATTTCTAGAAGGGACTTAATTTACTGGTTATTCTCTCTGGGTGCAAATACCTGCTTCCCATACCACTTCTTAAAGC CTGGTTAATTATTGTATTGAGTATTGACTATGCTCAACATGTGCATTTCATAGTAATGATTGAGGATTTGGCTGCTATAA ATAGTAGGGGGCATTTTAGAGGGTAAAGTGCTGAATTATAACCTCTGATTGAGAAATCGTTAGTTAGAATTTGAACAACC TCATAATTTGTGATATATGTGCATGTACTTTAATTACAATTTCAACCATTGATTAAGAAATCAACTGGTTATAATACTGA ACTTTGTTCTCTTAAGTGTGGACCGATTCTAGTTATTGAAATTGCAATCATGCATGAGATCTTTGTAATTCCTTTTGGTT GCTTTGTGCTGCGTGTTTTAGCAGGCCAACTTTGGACTGATCTAATTGATATGTTTTGATAGTTATAAGGAGATTTGATA AATAATATTTGCTAGCTCTGATCAGTGACAATTTACAATTTGAAGGAGCATCCTGATGCGATTTCTTTTGAAGAGACCAT CCTAAAAAATCATAGTGATTTGTGCTTACTTTTTGGGACTCCAAAACAGAATGGTATGCAGGGCTGTTTGAGAATAAAAT TGAAGACCAATAATAACAATTTTGGGATGGAGAATCAAGAAATGGTGGGAGGCCTGCAATCTTCAGCTAGGGAATTTAAA ATATCTAATGGGAGAAAAAGGCGGAAATCTGAAGCTGCATTGACTTCCTCAAATGCCAGAAAAGTTCAAAAAACCTCACT AGGTGAGATGCAAGAAGATTTAGAAGTGCAAAATGACAACTCAATAGAAAGCATTGTTGCTGCACTTCAAACTGTACCAG ACTTGGATGATGAGCTCTTCTTGGAGGCGTGTTTACTTCTAGAGGATGAAAGGAAGGCTGACATGTTTGTGGCAATGGAT TCAACCGCGAGAAGAAGGTGGTTGCTTAAACAGCTTCCCCAGTTACAACAATCTTATTGTTAGAACTTGATTTACACTTA GGTGTAAAGCCAAGTTTCTGTGGGAAATTTGTTGCACATATTACACTGTTAATTGCTGAGTATTGGTACACTAGCCATTC CTGATGAGGCTTGAAAAATTGTTTCCCAAGAAATGCCTAAACAGATTTCTTCTCTTTCATGAAGTGTATGAACAAGTTTA CACTGTAGGTAAAAAGAGAATAAAAACGAGTATATTCCATGAACTTTAAAAATCTTATGGCTATCTGAACCATGCGCCGC TAGCTACTTAGCTTACGTTAAAGAGCTTCCACTGTTTTGGTCTTCTTGGCCTTTAGATGTTGACAAATGACAAACATCAC TCATAATCATTTCATTATTGAATTAGGATAAAGTTTCTTATGGTGGTGGAAAATGAGTGCGTGGAAGAGATATAGAAGGA TATAAAAGATGGAAAAGAGACATTTGAGAAAGTAGGTATGAAAAAGTCATAGTTAATTGAATTATTCACTGTTCCATTTT GCAATTCCTGTGCCAGTAAAACAGTAATAAATTGACTTGGTAGTGCC
CDS sequence (LotjaGi5g1v0219600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAGCCAGATACCCAGAGGGAATGTGAATGTTCCATCAGGGACAAATTGGACACCTGCAATGGAAAACTATTTCAT TGGTCTGTTGTTGGATCAGGTGCATAAGGGCAACAAGGTGAGCTATACTTTCAACAAACAAGCTTGGAATGAAATGTTGG CTTTGTTTAATGCTAACTTTAGGTCTCCTCCTCATGATGTTAATCTACTCAAAAACCGGTACACGACTTTGTCGATGAAG TTCAACGACATCAAGAATCTTCTTGACCGAAATGGGTTCTCTTGGGATGAGACTAGTCGAATGGTAGTTGCTAGTGATCG TGTTTGGGATGCCTATATCAAGGTACACCCACATGCGCAAGCCTACAGAGGTAAAGAACTTGTGGATATTAAAGATTTGT GTTTGGTATATGCACATGAAAGAACAGATGGAAGATATAGCTTGTCGAGTCATGATGTCGACTTTGGTGATGATGAACAA GTGGTCAATACTGGTAGTGGCAGAGAAGGTGTGTACCACTCCTCGGATGGTGATGAATATGTGAGAGGAAGTTGGACCTT ACTCATGGACTGTTATCTTACTGACTTGCTGCTAAATCAGGCACTTAAAGTTAATAATTCCAGTCATGATTTCACCTTTG AAGCTTGGTGTGATATTGTCACATCATTCTGCGTTAAATTTGGTTCTCACTACACTAAAGAGGATCTAAAGAATAGACAG AAATATTTGGAAAAACATTTTGATGACTTAAAAGTTCTCACCAAGCAGTCTGGCTTTGCTTGGGATGGGAAGCAAGAAAT GGTAATGGCTGAAGACGAAGTATGGAACTCTTACACCAAGGTGCATCCTGATGCTTTGTTATATAGAAATAAATTTGTTC CAATCTATCACAAATTATCCTTGATATATGGCGGTGAGTTTTCTGAGGAAAGGTGCAGCCATTCTTGTTGCAGCATAGAT CATATTTGCAATGGACCAATTTCAACAATAGTTGATGAGGACATCCAAGATTGTGCGATAGATTACTTTTCAAGGGTAGA TGGGACACCTTACATGGACCGTTATCTCATTGACCTTATGGTTGAGGAGGTTCGGAGGAGGAACAAGATTGATTATGTTC GCAACGATCAAGCATGTTTAGATATGGTTGTGATGTTCAAGGAAAGATTTGGTATACAATTTGATAAAAACTACCTCAAG CATTGTTGTAAAGGTTTGGAAAAGTTATACCACAAGATGAGAAGTCTTCTTGAAGAGAGAGGGTTCTCATGGGATGAAAC ACGGCAAATGATCACTGCATGTAATGGTGTCTGGGATGCTTATATTAAGGAGCATCCTGATGCAAATTCTTACAGAAATC ACCAAAAGCCAAATTATAATGATCTATGCTTGATTTATGGAAGTTCAGATACTGAGTTGACATGTAACCCAGCTAATCAA AATGTTGGATACAATGATTGCAGCATCATATGTCAAAAACTTCACTGGAGAAGTAATTGGACCCCACCAATGGATCGTTA TTTTATGGACTTGATGTTAGAGGAAGTGCGAAATGGAAGCATGGTTGATCATAAGTTTGACAGATTAACCTGGAGAGATA TGGTGGCAAAATTTAGTGCAGAATTTGGGTCCCAGTATGATGAAAATGCCTTGCAAAGTCAATATATGACTCTGAGAAAG AGATTCAATGATATGAAGACTCTGCTTAACCAAAGAGGGTTTGCCTGGGATGAAATGCAGCAAATGATAAGAGCTGATGA AAGATTGTGGGATTCTTATGTGAAGGTGCACCCTGCTATGAATGCATATTGCAATAGAACTCTTCCAAGTTTCAATGATT TGTTTTTGATATATGAAAATACAAACTGTGGCCGAAATGAACACTATTCTGGCTTCTCTAGGGGTTCTTTGGATAATGGA CTGAGTACTGATGTTTGGGAGTACAACCATTCGCCTCCTAGCGTTGAACCTATGAGGATGGCTTGGACAATGCAAATGAA CCGTTATCTGATTAGCCTTTTATTAGACCAGTTGAATAGAGGGAATAAGATTGGTGTTACATTCAGTAAGAAAGCTTGGT CCAGGATGACTGCATCATTCAATAGAGAGTTTGGACTACTTTGTGACAGAGATGCCCTAGAAAATCAGTATTTGGGTCTC GTTAGAGTCTACAGAGATGTGACATATCTTCTAAATCAAAATGGCATTGCCTGGGGCAAAATCCAGCACACGTCAAGGGG AAATGATGTTTGGCAGTCTTATTTTCAGAATGGTATGCAGGGCTGTTTGAGAATAAAATTGAAGACCAATAATAACAATT TTGGGATGGAGAATCAAGAAATGGTGGGAGGCCTGCAATCTTCAGCTAGGGAATTTAAAATATCTAATGGGAGAAAAAGG CGGAAATCTGAAGCTGCATTGACTTCCTCAAATGCCAGAAAAGTTCAAAAAACCTCACTAGGTGAGATGCAAGAAGATTT AGAAGTGCAAAATGACAACTCAATAGAAAGCATTGTTGCTGCACTTCAAACTGTACCAGACTTGGATGATGAGCTCTTCT TGGAGGCGTGTTTACTTCTAGAGGATGAAAGGAAGGCTGACATGTTTGTGGCAATGGATTCAACCGCGAGAAGAAGGTGG TTGCTTAAACAGCTTCCCCAGTTACAACAATCTTATTGTTAG
Protein sequence (LotjaGi5g1v0219600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSQIPRGNVNVPSGTNWTPAMENYFIGLLLDQVHKGNKVSYTFNKQAWNEMLALFNANFRSPPHDVNLLKNRYTTLSMK FNDIKNLLDRNGFSWDETSRMVVASDRVWDAYIKVHPHAQAYRGKELVDIKDLCLVYAHERTDGRYSLSSHDVDFGDDEQ VVNTGSGREGVYHSSDGDEYVRGSWTLLMDCYLTDLLLNQALKVNNSSHDFTFEAWCDIVTSFCVKFGSHYTKEDLKNRQ KYLEKHFDDLKVLTKQSGFAWDGKQEMVMAEDEVWNSYTKVHPDALLYRNKFVPIYHKLSLIYGGEFSEERCSHSCCSID HICNGPISTIVDEDIQDCAIDYFSRVDGTPYMDRYLIDLMVEEVRRRNKIDYVRNDQACLDMVVMFKERFGIQFDKNYLK HCCKGLEKLYHKMRSLLEERGFSWDETRQMITACNGVWDAYIKEHPDANSYRNHQKPNYNDLCLIYGSSDTELTCNPANQ NVGYNDCSIICQKLHWRSNWTPPMDRYFMDLMLEEVRNGSMVDHKFDRLTWRDMVAKFSAEFGSQYDENALQSQYMTLRK RFNDMKTLLNQRGFAWDEMQQMIRADERLWDSYVKVHPAMNAYCNRTLPSFNDLFLIYENTNCGRNEHYSGFSRGSLDNG LSTDVWEYNHSPPSVEPMRMAWTMQMNRYLISLLLDQLNRGNKIGVTFSKKAWSRMTASFNREFGLLCDRDALENQYLGL VRVYRDVTYLLNQNGIAWGKIQHTSRGNDVWQSYFQNGMQGCLRIKLKTNNNNFGMENQEMVGGLQSSAREFKISNGRKR RKSEAALTSSNARKVQKTSLGEMQEDLEVQNDNSIESIVAALQTVPDLDDELFLEACLLLEDERKADMFVAMDSTARRRW LLKQLPQLQQSYC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 167 | 167 | 0.0 | – | |
| PANTHER | 1 | 167 | 167 | 0.0 | – | |
| Pfam | 17 | 112 | 96 | 1.1E-27 | ||
| PANTHER | 177 | 325 | 149 | 0.0 | – | |
| PANTHER | 177 | 325 | 149 | 0.0 | – | |
| Pfam | 184 | 278 | 95 | 1.4E-21 | ||
| PANTHER | 329 | 628 | 300 | 0.0 | – | |
| PANTHER | 329 | 628 | 300 | 0.0 | – | |
| Pfam | 350 | 441 | 92 | 6.1E-19 | ||
| Pfam | 499 | 593 | 95 | 3.3E-25 | ||
| PANTHER | 650 | 756 | 107 | 0.0 | – | |
| PANTHER | 650 | 756 | 107 | 0.0 | – | |
| Pfam | 662 | 754 | 93 | 4.0E-17 | ||
| PANTHER | 772 | 886 | 115 | 0.0 | – | |
| PANTHER | 772 | 886 | 115 | 0.0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0219600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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