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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0219600 |
| Transcript ID | LotjaGi5g1v0219600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Myb/SANT-like DNA-binding domain protein; TAIR: AT2G24960.2 Myb/SANT-like DNA-binding domain protein; Swiss-Prot: sp|Q9FFJ8|LIMYB_ARATH L10-interacting MYB domain-containing protein; TrEMBL-Plants: tr|A0A067JI30|A0A067JI30_JATCU Uncharacterized protein; Found in the gene: LotjaGi5g1v0219600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:52609818..52615767) extracted from Lotus japonicus Gifu genome v1.2.
TTTTTTCATTGTTCATACAAGCTTAGTCGCAATTGGTTATGGCAGTTAGGCTGTTACTAGGTTGATTCTTCATCAGTTAG CAAAGCTTTGACTATCTTGTATATAGCAAGAGAAGAGTGTTACAATGGGGAGCCAGATACCCAGAGGGAATGTGAATGTT CCATCAGGGACAAATTGGACACCTGCAATGGAAAACTATTTCATTGGTCTGTTGTTGGATCAGGTGCATAAGGGCAACAA GGTGAGCTATACTTTCAACAAACAAGCTTGGAATGAAATGTTGGCTTTGTTTAATGCTAACTTTAGGTCTCCTCCTCATG ATGTTAATCTACTCAAAAACCGGTACACGACTTTGTCGATGAAGTTCAACGACATCAAGAATCTTCTTGACCGAAATGGG TTCTCTTGGGATGAGACTAGTCGAATGGTAGTTGCTAGTGATCGTGTTTGGGATGCCTATATCAAGGTGCGCGTTATGCT TGTTTGCGCTGTGTTCTCTAATTGTTTGACTGTTTTGCAAAATGAACTGATTAGCTGGAATGCAGGTACACCCACATGCG CAAGCCTACAGAGGTAAAGAACTTGTGGATATTAAAGATTTGTGTTTGGTATATGCACATGAAAGAACAGATGGAAGATA TAGCTTGTCGAGTCATGATGTCGACTTTGGTGATGATGAACAAGTGGTCAATACTGGTAGTGGTAGGTTTCTATCTGCTT CTGGATTGCTGTTCTGATTGTTGTATGTCATATAGTCATTTAAGAATGAAGATGTATATTGTTCTTGTGGCTGGAAAATT TTGGGAGTCTTTTTTTCTTCTGAACACATAGTGTTGTATAGTCATTGTTGTTTTTGCTGAGCACTGAGTCTTGTTTATCC ATAACTGCATATCTGTTTTCTGATTTGTTTAGTGGACTTTGTGAATCCATAACCAGTAGCATTTTCCCCTCCCCTCTTTC CATGAAGGGTTAGGGAATTTATTATAAAGACATTCCATTTTGCAGTAAAGCATTAGGAACTATTAGTTTTGGATATTTGC TGACTTTTGGGGAAATAAAGCATGACCGAGTGCAACTTTTTTATTGTTGATCAATTTACAACTTAAGAAAGTGTTGTCTA GTTTGAACAAGTAATGATTAATTGGAACTTCGAATTGTAGGAATTGCTGCTAGAACTCCAGATACATATTGGACATTAGC AATGGACTGTTATTTTGTGAAGCTTATGTTAGGTCAACTTAAAAATCACAATATGGTCCGTAATGGACTCTGCAGAAAAG CATGGAACCATGTGCTTAAGTTTTTCAACAAAAAGTTCGATGCCCAGTATGATAAAAGCTTCTTAAAACAACATTACAGT AAACTTGGGAATTACTATACTGATTTAAAAAATTTACTTGAGTTGAAAGATTTTTCATGGGATGAAAATCAACAAAGGAT TGTTGCTGATGATGATGTTTGGGACAACTACATCAAGGTATACTATTATGTTGATTATGACATTGGAATTTACTTTTATT TCAAATTTTACATTGAAATGTTTATGCAAGAACACCCACATGCAAGTTATTATAGGAACAAGACCCTGGTTAACTATCCA GATCTGGGGTTAATATATAGCAATGCAATGTGCAATTACATGCTGATGCAGGAAGGTATAAACAATAAGGATTACTTTTT ATAACTCCAGATCAGTGAACTTCATCTCAATTCTTATCACAGATTCCAACCATTTATAGCTTATAATTATGTTTTGGATT ATTTAGTTAATGTCAATATCTGACATTGGACATTGTATAGAACATATTTGACGCTAAAATAGGTAATATGTTAAAGTAGA AACTGTTTTTTAGATCTCAATTCTTTATCAAATACTAGAATTTGTGTTTTGTGATCTTGCTTTTCCCTTGCAGGTTGTCT ATACTCTATATATTGAAACCCATGAGAATTTTAGTCAACTTCCAATTTCTAAAACCATAAAAATGTTTTGATGGGTGATT TCCTCTAATTAGGTTTCTTTTTGTCTTTAGGCAGAGAAGGTGTGTACCACTCCTCGGATGGTGATGAATATGTGAGAGGA AGTTGGACCTTACTCATGGACTGTTATCTTACTGACTTGCTGCTAAATCAGGCACTTAAAGTTAATAATTCCAGTCATGA TTTCACCTTTGAAGCTTGGTGTGATATTGTCACATCATTCTGCGTTAAATTTGGTTCTCACTACACTAAAGAGGATCTAA AGAATAGACAGAAATATTTGGAAAAACATTTTGATGACTTAAAAGTTCTCACCAAGCAGTCTGGCTTTGCTTGGGATGGG AAGCAAGAAATGGTAATGGCTGAAGACGAAGTATGGAACTCTTACACCAAGGTGAACTGCAATCTATACTTTTTGTTTTG TCTAGGATGCCCTTTTCATGTATTATTATAATTTATGTGAGATAAATGCAGGTGCATCCTGATGCTTTGTTATATAGAAA TAAATTTGTTCCAATCTATCACAAATTATCCTTGATATATGGCGGTGAGTTTTCTGAGGAAAGGTGCAGCCATTCTTGTT GCAGCATAGATCATATTTGCAATGGACCAATTTCAACAATAGGTATTCTCTTGTTTTCCTCTAAATTATGCAGTGGTGGA AATTTTGAATCATCTTCAATTGGTGGGAGTAATTTATTTTGATTTATGGTTTGGAGGAGTTGATGAGGACATCCAAGATT GTGCGATAGATTACTTTTCAAGGGTAGATGGGACACCTTACATGGACCGTTATCTCATTGACCTTATGGTTGAGGAGGTT CGGAGGAGGAACAAGATTGATTATGTTCGCAACGATCAAGCATGTTTAGATATGGTTGTGATGTTCAAGGAAAGATTTGG TATACAATTTGATAAAAACTACCTCAAGCATTGTTGTAAAGGTTTGGAAAAGTTATACCACAAGATGAGAAGTCTTCTTG AAGAGAGAGGGTTCTCATGGGATGAAACACGGCAAATGATCACTGCATGTAATGGTGTCTGGGATGCTTATATTAAGGTG TGTGATACTTATTCTTTCGTCGTACTTCCAAGCTTCGATTTTTGGTGCCTGATCCTGCAATATACAGGAGCATCCTGATG CAAATTCTTACAGAAATCACCAAAAGCCAAATTATAATGATCTATGCTTGATTTATGGAAGTTCAGATACTGAGTTGACA TGTAACCCAGCTAATCAAAATGTTGGATACAATGATTGCAGTAAGTTTTCATTGACTATCTTACTGTAGTTTTGTAGTCT AGAGTACTTTCTGTTACAACTTTTCGTAGTTGATTATGCTTCACAATAGGGGGGATATAGAGATAGAGATAGCTCACCCT TTAAATGTATTTGTGATCAATAGAATATTTCACTGAACATGCCAAAGTATTTAAAAGGCTATTGTTAGTGCCCTTTTCCT TTATAACATATTGTTGATATCTTTTTGCAGGCATCATATGTCAAAAACTTCACTGGAGAAGTAATTGGACCCCACCAATG GATCGTTATTTTATGGACTTGATGTTAGAGGAAGTGCGAAATGGAAGCATGGTTGATCATAAGTTTGACAGATTAACCTG GAGAGATATGGTGGCAAAATTTAGTGCAGAATTTGGGTCCCAGTATGATGAAAATGCCTTGCAAAGTCAATATATGACTC TGAGAAAGAGATTCAATGATATGAAGACTCTGCTTAACCAAAGAGGGTTTGCCTGGGATGAAATGCAGCAAATGATAAGA GCTGATGAAAGATTGTGGGATTCTTATGTGAAGGTGTGTCTTCCAAGCGAACTAGTTTTGCTTTGTTTTTCTTTTGGTGT TTTTGGACATTTTGATGCCCATCTCAGGTTTCCTATAATTTTGCAGGTGCACCCTGCTATGAATGCATATTGCAATAGAA CTCTTCCAAGTTTCAATGATTTGTTTTTGATATATGAAAATACAAACTGTGGCCGAAATGAACACTATTCTGGCTTCTCT AGGGGTTCTTTGGATAATGGACTGAGTACTGGTATATTCTTCATCTTTCCATTTGTAGTTTCTGGCATAGCTTTCCCCTG TATTCTGGTAGAAGTTTTTTATTCTTCTGGAAGGACATTTCAAAGCAATTGTGTTGATTTATTTGAAAGAGTACTTGGGA CTGAGTCATTACTTTAACTGTTAATAGATTTCATTATAAATGTAGACTATCTTACGCAATAATTGTAATTACTGTTTCTG CTTTAATATATAGATGTTTGGGAGTACAACCATTCGCCTCCTAGCGTTGAACCTATGAGGATGGCTTGGACAATGCAAAT GAACCGTTATCTGATTAGCCTTTTATTAGACCAGTTGAATAGAGGGAATAAGATTGGTGTTACATTCAGTAAGAAAGCTT GGTCCAGGATGACTGCATCATTCAATAGAGAGTTTGGACTACTTTGTGACAGAGATGCCCTAGAAAATCAGTATTTGGGT CTCGTTAGAGTCTACAGAGATGTGACATATCTTCTAAATCAAAATGGCATTGCCTGGGGCAAAATCCAGCACACGTCAAG GGGAAATGATGTTTGGCAGTCTTATTTTCAGGTGCACTATGTTTTAATTGGTTATATATGGGGTGTTTCCCTTTTTTTAA TGGCAACATGTACATAATTTCTAGAAGGGACTTAATTTACTGGTTATTCTCTCTGGGTGCAAATACCTGCTTCCCATACC ACTTCTTAAAGCCTGGTTAATTATTGTATTGAGTATTGACTATGCTCAACATGTGCATTTCATAGTAATGATTGAGGATT TGGCTGCTATAAATAGTAGGGGGCATTTTAGAGGGTAAAGTGCTGAATTATAACCTCTGATTGAGAAATCGTTAGTTAGA ATTTGAACAACCTCATAATTTGTGATATATGTGCATGTACTTTAATTACAATTTCAACCATTGATTAAGAAATCAACTGG TTATAATACTGAACTTTGTTCTCTTAAGTGTGGACCGATTCTAGTTATTGAAATTGCAATCATGCATGAGATCTTTGTAA TTCCTTTTGGTTGCTTTGTGCTGCGTGTTTTAGCAGGCCAACTTTGGACTGATCTAATTGATATGTTTTGATAGTTATAA GGAGATTTGATAAATAATATTTGCTAGCTCTGATCAGTGACAATTTACAATTTGAAGGAGCATCCTGATGCGATTTCTTT TGAAGAGACCATCCTAAAAAATCATAGTGATTTGTGCTTACTTTTTGGGACTCCAAAACAGAATGGTATGCAGGGCTGTT TGAGAATAAAATTGAAGACCAATAATAACAATTTTGGGATGGAGAATCAAGAAATGGTGGGAGGCCTGCAATCTTCAGCT AGGGAATTTAAAATATCTAATGGGAGAAAAAGGCGGAAATCTGAAGCTGCATTGACTTCCTCAAATGCCAGAAAAGTTCA AAAAACCTCACTAGGTGAGATGCAAGAAGATTTAGAAGTGCAAAATGACAACTCAATAGAAAGCATTGTTGCTGCACTTC AAACTGTACCAGACTTGGATGATGAGCTCTTCTTGGAGGCGTGTTTACTTCTAGAGGATGAAAGGAAGGCTGACATGTTT GTGGCAATGGATTCAACCGCGAGAAGAAGGTGGTTGCTTAAACAGCTTCCCCAGTTACAACAATCTTATTGTTAGAACTT GATTTACACTTAGGTGTAAAGCCAAGTTTCTGTGGGAAATTTGTTGCACATATTACACTGTTAATTGCTGAGTATTGGTA CACTAGCCATTCCTGATGAGGCTTGAAAAATTGTTTCCCAAGAAATGCCTAAACAGATTTCTTCTCTTTCATGAAGTGTA TGAACAAGTTTACACTGTAGGTAAAAAGAGAATAAAAACGAGTATATTCCATGAACTTTAAAAATCTTATGGCTATCTGA ACCATGCGCCGCTAGCTACTTAGCTTACGT
CDS sequence (LotjaGi5g1v0219600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAGCCAGATACCCAGAGGGAATGTGAATGTTCCATCAGGGACAAATTGGACACCTGCAATGGAAAACTATTTCAT TGGTCTGTTGTTGGATCAGGTGCATAAGGGCAACAAGGTGAGCTATACTTTCAACAAACAAGCTTGGAATGAAATGTTGG CTTTGTTTAATGCTAACTTTAGGTCTCCTCCTCATGATGTTAATCTACTCAAAAACCGGTACACGACTTTGTCGATGAAG TTCAACGACATCAAGAATCTTCTTGACCGAAATGGGTTCTCTTGGGATGAGACTAGTCGAATGGTAGTTGCTAGTGATCG TGTTTGGGATGCCTATATCAAGGTACACCCACATGCGCAAGCCTACAGAGGTAAAGAACTTGTGGATATTAAAGATTTGT GTTTGGTATATGCACATGAAAGAACAGATGGAAGATATAGCTTGTCGAGTCATGATGTCGACTTTGGTGATGATGAACAA GTGGTCAATACTGGTAGTGGCAGAGAAGGTGTGTACCACTCCTCGGATGGTGATGAATATGTGAGAGGAAGTTGGACCTT ACTCATGGACTGTTATCTTACTGACTTGCTGCTAAATCAGGCACTTAAAGTTAATAATTCCAGTCATGATTTCACCTTTG AAGCTTGGTGTGATATTGTCACATCATTCTGCGTTAAATTTGGTTCTCACTACACTAAAGAGGATCTAAAGAATAGACAG AAATATTTGGAAAAACATTTTGATGACTTAAAAGTTCTCACCAAGCAGTCTGGCTTTGCTTGGGATGGGAAGCAAGAAAT GGTAATGGCTGAAGACGAAGTATGGAACTCTTACACCAAGGTGCATCCTGATGCTTTGTTATATAGAAATAAATTTGTTC CAATCTATCACAAATTATCCTTGATATATGGCGGTGAGTTTTCTGAGGAAAGGTGCAGCCATTCTTGTTGCAGCATAGAT CATATTTGCAATGGACCAATTTCAACAATAGGAGTTGATGAGGACATCCAAGATTGTGCGATAGATTACTTTTCAAGGGT AGATGGGACACCTTACATGGACCGTTATCTCATTGACCTTATGGTTGAGGAGGTTCGGAGGAGGAACAAGATTGATTATG TTCGCAACGATCAAGCATGTTTAGATATGGTTGTGATGTTCAAGGAAAGATTTGGTATACAATTTGATAAAAACTACCTC AAGCATTGTTGTAAAGGTTTGGAAAAGTTATACCACAAGATGAGAAGTCTTCTTGAAGAGAGAGGGTTCTCATGGGATGA AACACGGCAAATGATCACTGCATGTAATGGTGTCTGGGATGCTTATATTAAGGAGCATCCTGATGCAAATTCTTACAGAA ATCACCAAAAGCCAAATTATAATGATCTATGCTTGATTTATGGAAGTTCAGATACTGAGTTGACATGTAACCCAGCTAAT CAAAATGTTGGATACAATGATTGCAGCATCATATGTCAAAAACTTCACTGGAGAAGTAATTGGACCCCACCAATGGATCG TTATTTTATGGACTTGATGTTAGAGGAAGTGCGAAATGGAAGCATGGTTGATCATAAGTTTGACAGATTAACCTGGAGAG ATATGGTGGCAAAATTTAGTGCAGAATTTGGGTCCCAGTATGATGAAAATGCCTTGCAAAGTCAATATATGACTCTGAGA AAGAGATTCAATGATATGAAGACTCTGCTTAACCAAAGAGGGTTTGCCTGGGATGAAATGCAGCAAATGATAAGAGCTGA TGAAAGATTGTGGGATTCTTATGTGAAGGTGCACCCTGCTATGAATGCATATTGCAATAGAACTCTTCCAAGTTTCAATG ATTTGTTTTTGATATATGAAAATACAAACTGTGGCCGAAATGAACACTATTCTGGCTTCTCTAGGGGTTCTTTGGATAAT GGACTGAGTACTGATGTTTGGGAGTACAACCATTCGCCTCCTAGCGTTGAACCTATGAGGATGGCTTGGACAATGCAAAT GAACCGTTATCTGATTAGCCTTTTATTAGACCAGTTGAATAGAGGGAATAAGATTGGTGTTACATTCAGTAAGAAAGCTT GGTCCAGGATGACTGCATCATTCAATAGAGAGTTTGGACTACTTTGTGACAGAGATGCCCTAGAAAATCAGTATTTGGGT CTCGTTAGAGTCTACAGAGATGTGACATATCTTCTAAATCAAAATGGCATTGCCTGGGGCAAAATCCAGCACACGTCAAG GGGAAATGATGTTTGGCAGTCTTATTTTCAGAATGGTATGCAGGGCTGTTTGAGAATAAAATTGAAGACCAATAATAACA ATTTTGGGATGGAGAATCAAGAAATGGTGGGAGGCCTGCAATCTTCAGCTAGGGAATTTAAAATATCTAATGGGAGAAAA AGGCGGAAATCTGAAGCTGCATTGACTTCCTCAAATGCCAGAAAAGTTCAAAAAACCTCACTAGGTGAGATGCAAGAAGA TTTAGAAGTGCAAAATGACAACTCAATAGAAAGCATTGTTGCTGCACTTCAAACTGTACCAGACTTGGATGATGAGCTCT TCTTGGAGGCGTGTTTACTTCTAGAGGATGAAAGGAAGGCTGACATGTTTGTGGCAATGGATTCAACCGCGAGAAGAAGG TGGTTGCTTAAACAGCTTCCCCAGTTACAACAATCTTATTGTTAG
Protein sequence (LotjaGi5g1v0219600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSQIPRGNVNVPSGTNWTPAMENYFIGLLLDQVHKGNKVSYTFNKQAWNEMLALFNANFRSPPHDVNLLKNRYTTLSMK FNDIKNLLDRNGFSWDETSRMVVASDRVWDAYIKVHPHAQAYRGKELVDIKDLCLVYAHERTDGRYSLSSHDVDFGDDEQ VVNTGSGREGVYHSSDGDEYVRGSWTLLMDCYLTDLLLNQALKVNNSSHDFTFEAWCDIVTSFCVKFGSHYTKEDLKNRQ KYLEKHFDDLKVLTKQSGFAWDGKQEMVMAEDEVWNSYTKVHPDALLYRNKFVPIYHKLSLIYGGEFSEERCSHSCCSID HICNGPISTIGVDEDIQDCAIDYFSRVDGTPYMDRYLIDLMVEEVRRRNKIDYVRNDQACLDMVVMFKERFGIQFDKNYL KHCCKGLEKLYHKMRSLLEERGFSWDETRQMITACNGVWDAYIKEHPDANSYRNHQKPNYNDLCLIYGSSDTELTCNPAN QNVGYNDCSIICQKLHWRSNWTPPMDRYFMDLMLEEVRNGSMVDHKFDRLTWRDMVAKFSAEFGSQYDENALQSQYMTLR KRFNDMKTLLNQRGFAWDEMQQMIRADERLWDSYVKVHPAMNAYCNRTLPSFNDLFLIYENTNCGRNEHYSGFSRGSLDN GLSTDVWEYNHSPPSVEPMRMAWTMQMNRYLISLLLDQLNRGNKIGVTFSKKAWSRMTASFNREFGLLCDRDALENQYLG LVRVYRDVTYLLNQNGIAWGKIQHTSRGNDVWQSYFQNGMQGCLRIKLKTNNNNFGMENQEMVGGLQSSAREFKISNGRK RRKSEAALTSSNARKVQKTSLGEMQEDLEVQNDNSIESIVAALQTVPDLDDELFLEACLLLEDERKADMFVAMDSTARRR WLLKQLPQLQQSYC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 167 | 167 | 0.0 | – | |
| PANTHER | 1 | 167 | 167 | 0.0 | – | |
| Pfam | 17 | 112 | 96 | 1.1E-27 | ||
| PANTHER | 178 | 325 | 148 | 0.0 | – | |
| PANTHER | 178 | 325 | 148 | 0.0 | – | |
| Pfam | 184 | 278 | 95 | 1.4E-21 | ||
| PANTHER | 329 | 629 | 301 | 0.0 | – | |
| PANTHER | 329 | 629 | 301 | 0.0 | – | |
| Pfam | 351 | 442 | 92 | 6.1E-19 | ||
| Pfam | 500 | 594 | 95 | 3.3E-25 | ||
| PANTHER | 651 | 757 | 107 | 0.0 | – | |
| PANTHER | 651 | 757 | 107 | 0.0 | – | |
| Pfam | 663 | 755 | 93 | 4.0E-17 | ||
| PANTHER | 774 | 887 | 114 | 0.0 | – | |
| PANTHER | 774 | 887 | 114 | 0.0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0219600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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