Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0222800 |
| Transcript ID | LotjaGi5g1v0222800.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | N-acetylneuraminate lyase; TAIR: AT1G67810.1 sulfur E2; Swiss-Prot: sp|Q9FXE3|SUFE2_ARATH SufE-like protein 2, chloroplastic; TrEMBL-Plants: tr|A0A151U502|A0A151U502_CAJCA Bloom syndrome protein isogeny; Found in the gene: LotjaGi5g1v0222800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:52965705..52972086) extracted from Lotus japonicus Gifu genome v1.2.
GCGGGATTCTAACTTGGGAATCAGAACAGGAACATAGTTTCATTTCACTCCCTGATGAATCTCTGCTCTGCGATTTGCCT CAAAATCTCACAACACAAGCTAAGTTCAGGTGTAAATTTGAAAACTTGGTAGAACAATCTTACAAGAGAAGAAACAACCA CAGTGCTGGTTCAATTTTCCCCCAAAACACAAAAGGGGTTTACGTTTTCGTCAATTTTCAGCCATGGACGCCAACAACAA CAACAACACATCTTCCGATCAAGTCATTGCAGAAATGGTTGAAATGGGTTTCCAGCATTCCACCATTCTCGAAGCCATTG AAGCAGTAGGTCCATCGATTCGCAGCGCGGTGGAGCATATTTTCAAGACTACCACCATTTCTAACCCTAACCCTAACCCT GAACCACCAACTCACACCTTCAAATCACGCAATGGGAATGCCCTGAATAAACAATCTTTGCCGTCGTCGTCGTCGCATCC GAAGCCAATTGATCATTATTTCAAACCCATTGGTAAAGTCAAGAGCAAGAAAAGTGAAAATGAGGTTGTTGTTAATGATG ATGTAATGAGAGCTGAAGAGTTGGATGTAACATCTGATTGGGAGCAAAAATTCGAGAAAAGCGAGGTTGTTATTGCTGAT GATGTAATGAGAACTGATCCTGATGTAGCATCTGATTGGGAGCACACAGTTAGCAAGTTGTTGCAAAAACATTTTGGGTT TTCAGCATTGAAAAGTTTTCAGAAGGAAGCACTAGCTGCTTGGGTTGCAAATGAAGATTGTCTTGTTCTTGCTGCAACAG GATCTGGTTTTGTTCTTTCTCTCTGATTAATCTTGTGTGTTTCTTAGTAATTGTGTATTTACTTACAGGAAGGTTTTTTC TATGCAGGTAAGTCTCTGTGCTTTCAGATTCCTGCATTGTTAACTGGGAAAGTGGTGGTTGTGATCTCACCCTTGATAAG CTTGATGCAGGACCAGTGCTGGAAGCTAACAAAGCATGGGCTCAGTGCTTGCTTTCTCGGTTCTGGGCAACGTGATGATA CTGTTGAAAGGAAAGCAATGAAGGGTGTGTACAGTATAATATATGTTTGCCCGGAGACACTTCTGAGGTATGTATGGTTA GGGGCATTGAAGTCGGTTTTGTGTCTGAGAAGTCTTTGATTTAAGTATTTTTATGTCTGGTAACTACAACTGTCCTATGT AGATTGTTGCCACAGCTGCAGAAGCTTGCAAATGGCCGTGGAATTGCTTTATTCGCAATTGATGAGGTGCATTGTGTTTC TAAATGGGGTCATGATTTCCGTCCAGCTTACAGGTTTGTTTTATGCATTCTATTTCCTTGTTGTTCATTATGGATCAATT TGTGTACAATACATAGAACATCTTAAAAGATGATATATCACCTGTGGTTTGTAAAGAAACTAAGATCAATTGCTAGATGA TTTGGTTGATTACCACACATATCACTTTTTTGTTCTTTTGCATACCTCTAAATTTCCTAAATATCTTTATTCAACTGTCA TATGTATGACCTGTTTTTAAATTTCTTCTCTTGTTGCAGAGAATTGTCTGTGTTAAGGGAAAGTTTCTGTACTAGCAGGA TAAAATCCCTGAAATTTGATATACCTCTGATGGCCTTGACAGCTACTGCTACAAAGAGAGTTAGAGAAGACATTTTAGAA TCACTATGCATGTCAAAAGGAACAAAAGTTGTTCTCACATCATTTTTTCGACCTAATTTACGCTTCATGGTGAGTTTGCC CATGTTTAATCACTAAACTTGCATCTAACGACACCATCTTCTCGTTACTTTATAATGCTTAAAAATTACTATGGCTTCTA TAGGTAAAGCATAGTAAAACATCACAAGTTTCTTATGAGAAAGATTTTCATGAATTGATTAAGGAATATGGTAGAGAGCA AAACATTGGTGGAAATAAAGAAGCTTTCATCTCAGATGGTTCAGATGATAGTGGTTCAGATGCCAGAAGAAGCTCTGATA CAGACAGTGTTTCTTCTCATGAATTGGATGACAACCAAGATAAGTATGATGACAGCAATATTAATGTAATGCTTTCAGGA AACATAGACAATCTTCAAGAGCCTTTGCAACCAGGACCAGCAATCATATATGTGCCCACCAGAAAAGAAACACTGAGAAT CGCACAGTACCTATGCAAGTTTGGCGTGAAGGCTGCTGCTTACAATGCAGGGGTAAGGATTATATATTTTACTCAAACTT TTTAATTTATATGGCCGTTTAAATTTGTAATCAACTAAAATTTGTCAGGATGAGAATCGTTAATTCTAAGACACCATGAA GTACTAACTACTAAGAAGGAGATTTTTATTTTTTGTTATTGTTCTTCCTGTTTTACTTTTAATCTATTTTGGCATGCACC ATTGCATTTCATTGAACCAAACTCTGTAGTTACTTTGACATTACTATGTAAGTTTGCTGAGCTCATTTTCTTTCTCCAGC TTAACACGTCGCATCTAAGCAGGGTTCATAAAGAGTTTCATGACAATACTTTAGAGGTATGGATCCGGAGCCTGAACAAA ATATATGTCTACATTTCAATGTCTTCCAACCTGAGTACTGTCATTTTTTTTCTTTGGGGGGGGGGGGGGAGTACTGTCAA GTTTGTATAGCTGTGGTGTGCTATTCACATGACAGTTATTATGAAAATAGAGGACAAGGTCCATGGAACTCTTTCATTAA AAGGAATTGAATAATACCCATTCGCTTTTTTTCCTGATTTTGATAGCTCTTTTCAGTTTGTGACTAGTTTTCATACTTAA TGCACCCCACTCCATGTTTTTTTTTTACTTCAGCTTTTTCAACCCTGCACAACCTGTTATACATCTAAGCTTTGGTGTTT CTTCGTAATTATTTGTTAAGACATGGCTTTGAAATGTGTTTTTTTTCCACCTTGTTTACCCCTATGTTGCCTGAAGAGTT CACTACATAATTTAAATTATTTCCTTATTCCAGAATCATCAACAGGTTTGACTAGAAACAGTTATGCTTTTGTGTTTTAC CATTTTCAGGTTGTAGTTGCAACAATAGCATTTGCAATGGGGATTGACAAATCGAATGTCAGAAGAATCATCCACTATGG TTGGCCGCAGGTCTGTTTTTCAAATAATTTTTGCTGATATATTAATTAGATTTTAAGTTTGTCTTTTCTTGTGCATTCCA TATTTTATGCTTTCACTTCCTGGATTGTCCATCTTTTTCTTTTGACATGCCTCAAATAATCAAATATGTAATTTGATCAT CAGAGTTTGGAAGCCTACTACCAAGAAGCTGGACGGGCTGGTCGAGATGGGAAATTAGCATGTTGCAGTAAGTTCAATTA TACTATAATATAATTTTTTACATTGCGCATTTCTTTTGTTCTCGTCATTTTCTGTTGGATTTTAAATTCATGTTTATACC TTTATGTTCACATAATTAGTAGGCTCCTTATTTTTTAATTCTTCTGAGACACTTATATCCTGTGTTTGTTCCCAATTTCA CAACAAGTTCTATATGCAAACCTAGCAAGAAAGCCATCACTTTTGCCAAGTCGTAGAAGTGATGATCAGATAAAACAAGC ATATATTTTGCTGTCTGATATTTTCAGGTTTGCTTTGATCAATACACCTTTATGTGTCTTTTCTTTTGTTTTATTTTAGT ACAGAACCTTAATGTATATTTGTAGATATGGAATGAATACTTCACATTGTCGCGCAAAGACACTTGTTGAGTACTTTGGA GAAGATTTCAGTCAACAAAAATGTTGCTTGTACGTAGAGTTTGATCTCAAAGCCTTGCTTTCTTATTATGTTTAAGCATC TGTTTAAGTGAAAAATTATTCTAATATATGAGAAGCTTGAGACCCTGTGTGTATTTCTAATTCAACCAATAGTTGATACC GAATTACCTTTTTTTTGAAGCACTAACATACTTGTTTCCTCTTGTAATCATGGGATTATTTTTCGAGTCATTTATGAACC TCCTTTCATGCAGATGTGATGTGTGCATTAATGGACCACCTCAAAGGCAGAATCTAAAAGAGGAGGCCTGTGTTTTACTG CAAACAATATGTGTCCATAATGTATGTCAAACGGTTTCAATTTATACCAATTAAACTTGCATTTCTGTCTTGTGAATTTA TAATTATATCCAAATATTGACCCGGTGGGTGCTAGTCACAATGGTTAAAGTGACTACTAGAACCACCAGATCAAAAGTTC GATCCTTAGGAGCTGCACTTTTGCCAATACCTTCAGCCTTCACCACACCCAGGTCGGAATTGTGAAAATGACTTGGTACA CCCAAAAAATATTGACCCTTGTATTTTCATGGCATTCTTTCCAAAAGTCCTCTTCCTACTCGTGTATTTTTTCTCTTTCT TGAGATTAAGTTTCAACATGATTAAATAAATGATCAAACAAAGGGTTTGAGAGCTCAAGTTTTGTGGAGGAATATTGTCA CGGTCCATAGATTTGTATTTTCTATATTCCATAAGAGAAAAGAAACTGATGCAACATGAACGCTAATTTTTCAGGCTTCT AGCTACTCCTTGGATCCTTCATATAATGATGATATCCACTTTGGCTCCAAAAGTAGAAGGCTAGAAAAGAGACCCAGTCT TATGAAGTTAGTTAGAAATATAAGGAAGCAGGTGAACCTACATATAATTGTCATCTCTCACTGTTTGTTATGTACTCATG TTGGGTATTCTATATTGTTGCTAATTCCTGTAACAATTTTTTGTTGTTTTCATATGTTGTGGCCATCTGCAGTTTCAAAA GTTTGTAACCACTGATATATTATGGTGGAGAGGTCTTGCTCGAATTTTGGAAGTTAAAGGATACATCAAGGAAGGAGATG AGAAGGTATACTTGCTTTAACTAGATATAAGTTTAACCCATCCTTGTATATCAATATTGCAAAAGCCTGTTCACAAATGT CATAATTGAAAAAGTGGGATTTGTTGCATCTGATGATTAAGAAATGATATATACATTTGAGAAGTGATCCTACAAAGGTA ATTTAACATATAGACATAAACTGAGGATTGATAAAACATGTTTCTGCATTTAGTATTGAAGTAAGATTGAGCATTGGTAA TTCCACTTTAATTTCATCTCAAGTTTTGCTCTATACAATTGCAGACCCATGTTCAGATAAAATACCCCGAGGTAACAGAA CTGGGAATGGAATTTCTGAAGTGTGAGCAAGCTTTTTATGAGTACCTTGAGGCTGATATGTTGTTTGCCAAGAAAACTAA CAAACCATATTCCTCATTCTCAGAATGGGGAAAAGGTTGGGCTGATCCTGAGATCCGTCGCCAACGCTTGGAAGCAATGC GACTTGATAGAAATCCAATGCAGCGAGTTAGAAAGCAACCAAAGAGGAAGGTTAATACACCTGATATAAAGACTTTACTA ACATCAAAACTTTCAAAACATAAGTGATATGTATCTCATCTTTTTTATTGAAGTATATAATTTACTCGTTGGCTCATAGA AGTAATTCATCCATGATGATCTTAATCTTATCATGATTAATAGTAAAATCATGAATGTGTTTTTAACTTTTTGTAAGAAA AAGAGGAACTGAGACACAACATAAGTTGTTCAACACCTAACTGGTAAAATTGGTGATGACGGATTATATTGGCAGCATGT AAGGGGCACTAACACTTAGATATGTATTTTCCTACGCAGACAAGTAAGAAAAAGAATAGAAAATTAATTCCTGTTGAAGT AATGTAGTAACCCCAAACCGAAGCAAAGCATAAGGATCAGCATTGTTTGACTCATATACCCCCACCCCAAGGATATGTTG AACCAAGAACACCATTCATGGCATTTGGCAACATCGTTTTCGCGGTAATAGGCTTCTCTGCATCGTTCATATTTTGTGTG CCGAACCTCAAAAGATGGCACACGAAACAACTGGCTGCACAAAAATTAAGAATCATCAGCGAGGCCTTGGAGGTGGCAGA AGAAAGAGTGATGAGATTCGAAGAAAGACATGACAGAATTTTGAGAGAAATAAGCGCATGTTACTTGACCAATGCAGAAG TTGTTGAGGCACTAGCGGGTGCTCGAGCTACCATGAACCAGGCATTGGAGTTTGCTGTTGATTTGAGGACAATTCAGTAC AAAATCATTGCCTCTTTCCCTGATGTAATCGATGTTCTTTAGGAATTAAGGATTCAAAAAACAAGAGGAGCTTGAATTGC TCTCAGTTTTTAAAGCTTGCTTAAGATGTTTCGGCATGTAATGTTCATTATACATCTTTATAGTCCTTGCATGTTACAAT TTAGGAGTAAATAGTTGATCATGCGACTTTGTAAGATTTAAAGTTGAGTACTCAACTTCAAC
CDS sequence (LotjaGi5g1v0222800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATTTGGCAACATCGTTTTCGCGGTAATAGGCTTCTCTGCATCGTTCATATTTTGTGTGCCGAACCTCAAAAGATG GCACACGAAACAACTGGCTGCACAAAAATTAAGAATCATCAGCGAGGCCTTGGAGGTGGCAGAAGAAAGAGTGATGAGAT TCGAAGAAAGACATGACAGAATTTTGAGAGAAATAAGCGCATGTTACTTGACCAATGCAGAAGTTGTTGAGGCACTAGCG GGTGCTCGAGCTACCATGAACCAGGCATTGGAGTTTGCTGTTGATTTGAGGACAATTCAGTACAAAATCATTGCCTCTTT CCCTGATGTAATCGATGTTCTTTAG
Protein sequence (LotjaGi5g1v0222800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFGNIVFAVIGFSASFIFCVPNLKRWHTKQLAAQKLRIISEALEVAEERVMRFEERHDRILREISACYLTNAEVVEALA GARATMNQALEFAVDLRTIQYKIIASFPDVIDVL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| TMHMM | 5 | 24 | 20 | - | – | |
| Phobius | 6 | 24 | 19 | - | – | |
| Phobius | 25 | 114 | 90 | - | – | |
| Coils | 37 | 64 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0222800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…