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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0224400 |
| Transcript ID | LotjaGi5g1v0224400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heavy metal transport/detoxification superfamily protein, putative; TAIR: AT5G27690.1 Heavy metal transport/detoxification superfamily protein; Swiss-Prot: sp|Q84J88|HIP36_ARATH Heavy metal-associated isoprenylated plant protein 36; TrEMBL-Plants: tr|A0A0B2Q474|A0A0B2Q474_GLYSO Uncharacterized protein; Found in the gene: LotjaGi5g1v0224400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:53089490..53093118) extracted from Lotus japonicus Gifu genome v1.2.
TTTAAACTTATTAATAAATCAATAAAATCAGTTTTTTTTATACATCGGAAAACTACCAAAATAAAAAAACTAAACAACAC TGAGGAAATCCTTCAAGAGAAGGATTTTCAATTCACTATGAGGAACCTCAATCTCATGAATCCATGTAGTAGGGAGAAAG GGGCCACATTTTGCCAACCAATCTGCAACCATGTTTCCTTCCCGGGCTACCCATGAAAGCTCAACTCTCAAGTTCCAACG CAGCATGTCCTGAATCTCACTGAGAGTGACACGGTGAACGTGAACACGCACCCACTCCATATCATCCAGATTATTAACCA GCTCCTTGCAAACCGATTCACACAGCAAACAACGACAACCCCGCTCCCAAGCAAGTCGGAGGCCATCCCGCAGCGCCATC GCCTCCGCAAGAAAAGCACTGTCGGCGAGCCCATGAGACATAAAACTAGCGAGTCACCTTCCCGAGCTATCCCGCATGAC TCCACCACCACCCATCAGACCTTCGCCTACTATATACTTGCCATCAACGTTCAACTTCAAGAACATTGTCGGGGGTGGCC TCCAGGCCATGTTCAACCACTCATTTTTTTCGTGCATCATATCAGGTTGAAGAAACCTGAGTAAATCGTCGTGTTTGTGA GCGACCTTCCGCCACGCAGTCCACAGAGAACCATCCAGGACCATGTTGCAGCGCCCTTTCCACACTCCCCACAAACCCGC TAGAAACCTCACAACATGCCATGTTTAGATTCCAGAAATTAGGCCACCCCTATGCACCCACCTTGCCCCATAATTCACAA GAATGGGGACAATCCCTGAGACTATGTATCCCATCTCCCCGAGTGCATGAGCACCTAGAGCAAGCTTTCGAAGTAGCCAA TTAACACCTGAAACGATTTGAGTTTACCGGAAGAGCATCATGGAGGCAGAGCCAAACAAATAACTTCTTCCTCTCCGGAA TTCAAAACTTCCACATTCAATCCCAGTTCTGCGATACCGTCAACGCCTGATTTTGGTCACTAAGCCAAGAATAACAATTT CTAACCGTGCATCTCCCCGAATCCTGGCCCTCCCACGTCCAAACATCAGCGCCAGAAGCCTCCATAGTTGGGGAAACCGC CAAAAACCGATTTGTCATCTCCGCGGGAATCACTATATGGAGCCTATTCAAAGCCCAGCTATTATTCACCACCAAACTAA CTAAAATGTAAATTCAAAAAAAAAAACTAAAATGTTTAACTTTAGTGCCTATGACCTATGTTATTGTTATATCTCCTCTC TTGTATCCTTCTGTTTTCCCTCTTTCTGTCCTTCATTGAACAAAGTGTCAGAAATTAAAGAAGACTAACCAACCACGGCA ATTGAATGAGTGACATACAAAGAGAAAAAGTTTATATATGCCACGATATTTTGTCTTTGCTTTTTTCATAATGTCCTTCA CTCCTTTTCATAAAGCCTTTACTTTCATTAATTCACTTTTAAATACTAATAAATTACCTGCTCATGTCTCATTCCCTTAT TCTCTGCTTTTTAAGCATTCTCATCAGTTTCAGACTACCCTTCCCCTCTCTTCTCTTTCTCTGCAAACCGACTCTGCTGC TACCACAATCTTTGAAGTCCAAATCAAATGGCCGCAACAGAATCAAAAGCAGAAGCTAAAGAGGTGGAGCAACATTCAGA ACCTCTCACAGGCAAGGTAAATATCTGCTTAACTCTCATTCATTTGTTTAACAACTCTTTGGTTTTTTCTCCAACATGTT CTGAACTTGTTACTATTTTTTGTCCCAGATCACTACGTTGAGAGTCTCCATTCACTGCGAAGGCTGCAAGAGAAAAGTGA AGAAAATTTTACAGAGCGTATATGGTAATCATCTTCAAAATCCAACCATTTTTTCTGGGTATTTGATTTCATTTGTATTG ATTTTCTCAACAAAGTTTAACCTTGTGCTTAACACTGACCTTAATCTTCTCTGTAATCAAGGTGTTGATGACATAAACAT TGATTTGAGGCAACACAAAGTGGTGGTAACAGGGAACGTTGACAGCTACACTTTGATTAAGAGATTGACAAAGGCAGGGA AGCACGCAGAGTTATGGCCGGAGAAAGCAGAGTCGAAAAAGAAGAAAGAAAAACCTGCAGAAAACAGAGAGAAACAGAGT GATCCAGAAAGCAGGGAAGAAACCACCCAAAGCGGAGAACACCATGAAGAAACCGTTAAAGTCGTTGACGCATCAAAAAA CGTTGAAGCCGCCACCACCGCCGTTAAAAACAGCGACGGTTGCGGTGGGGTTAACGTTAACAAAGCTAATGAAGGAGGTG TAACCGGCAAACCCGGTGTGCAGTTTCAAGAACCGAAGGCAGCGGAGGTGAGGCAAACCGTGGTGTTACCGGCGGGACCG GTGACCGGGAAGAAGGTCAGCGTGGCTGTGCAAGTTCCTCAGGAAATTGAAGCACCGGGGAATGAACAAATTGGCGGCGG CGGTGGTGGTGGTAGCACCGGAGAGAAAAAGAAGAAAAAGAAAGGGAAAGCAAAAGTGAATAGCAACAACGGCAATGAGG GTGTTGCTGCTGTTACAGCTGAACACCCTGGTGGTGGTGAAGCGGCAGCTACCGGTGGTTTGGGTAACCGGTCAAAAGGT CAAGGCCATGTCCATGTCCCGGGACCTACAACTTCGGTTCCAATTTCAAGACCAGCCAATGAGAGTCCTCCACATCATCA CATGTACCCACCTGACAATGTGAGTGCTCCACGTCATCACATGTATCCACCACATTACTATGCTCCCCCTCAGCCGGCTC CGGTTTATACCATGAGCTACCACACGACGCATCCTAGTAGCAGCAGCGGCTATGGTGCGGCGTATTATGCACCTCCACAA CCGTATTCATATGCCCACGTGGTGCATCCGGGGAATGAAATGGAGCCTCCACCGTATACCTACGAATCAGAATCGTATGC CTCATCACAGCCGTCGGAATCATTCGAATACTTTAGTGATGAAAATCCTAATGCGTGTTCGGTCATGTGATGTGGTGTTG AGCACAATCATTCTATTGTTGAAGTGCTTTTTGGTCTTTTTTCACACATACAACTTGTATGAGCATTGAGGTAATTTTGT AATGCCTGTAGATATAGGGGAATATTATCAAAAGCTTCAAAAAGCAGAGTTAGGAAAAGGAACACAATTTGTTTGCTTTG AATTGAACAAATGAAAAGTTGGGGAGGACAATTATGGGGCTCTGGGGTCTCTGGTTTTTGTTCAGTGGTTCTTCTTGGTT CTTCATGATGATATATCATATATGTATTATTATACTTGAATTAGATAATTAATTAATTATTGGCCTTCTCATGCTAGTGC TTGAGTGCTGCCCCACATTGTCCATAACTCCATATCACGGTGCTATTGTATTGTGGCTTAATTGATTGTGCAGGGTCTGT ATGCTTTTTATATTTTTAGGCACTGGAATGTTGTAAAACGTTATTGGTTATAGGAGTATGAGCATATGAGGTGGGCCATA TGGAACATATTCTGAAAAATGTGTTGAGGTACGTGTTAAAAAATAAGCGGTTCAAAAAAGGTGAGATTATCAAAATCAAA TTTACAAGATGATAATATTAAGAACTCTT
CDS sequence (LotjaGi5g1v0224400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGCAACAGAATCAAAAGCAGAAGCTAAAGAGGTGGAGCAACATTCAGAACCTCTCACAGGCAAGATCACTACGTT GAGAGTCTCCATTCACTGCGAAGGCTGCAAGAGAAAAGTGAAGAAAATTTTACAGAGCGTATATGGTGTTGATGACATAA ACATTGATTTGAGGCAACACAAAGTGGTGGTAACAGGGAACGTTGACAGCTACACTTTGATTAAGAGATTGACAAAGGCA GGGAAGCACGCAGAGTTATGGCCGGAGAAAGCAGAGTCGAAAAAGAAGAAAGAAAAACCTGCAGAAAACAGAGAGAAACA GAGTGATCCAGAAAGCAGGGAAGAAACCACCCAAAGCGGAGAACACCATGAAGAAACCGTTAAAGTCGTTGACGCATCAA AAAACGTTGAAGCCGCCACCACCGCCGTTAAAAACAGCGACGGTTGCGGTGGGGTTAACGTTAACAAAGCTAATGAAGGA GGTGTAACCGGCAAACCCGGTGTGCAGTTTCAAGAACCGAAGGCAGCGGAGGTGAGGCAAACCGTGGTGTTACCGGCGGG ACCGGTGACCGGGAAGAAGGTCAGCGTGGCTGTGCAAGTTCCTCAGGAAATTGAAGCACCGGGGAATGAACAAATTGGCG GCGGCGGTGGTGGTGGTAGCACCGGAGAGAAAAAGAAGAAAAAGAAAGGGAAAGCAAAAGTGAATAGCAACAACGGCAAT GAGGGTGTTGCTGCTGTTACAGCTGAACACCCTGGTGGTGGTGAAGCGGCAGCTACCGGTGGTTTGGGTAACCGGTCAAA AGGTCAAGGCCATGTCCATGTCCCGGGACCTACAACTTCGGTTCCAATTTCAAGACCAGCCAATGAGAGTCCTCCACATC ATCACATGTACCCACCTGACAATGTGAGTGCTCCACGTCATCACATGTATCCACCACATTACTATGCTCCCCCTCAGCCG GCTCCGGTTTATACCATGAGCTACCACACGACGCATCCTAGTAGCAGCAGCGGCTATGGTGCGGCGTATTATGCACCTCC ACAACCGTATTCATATGCCCACGTGGTGCATCCGGGGAATGAAATGGAGCCTCCACCGTATACCTACGAATCAGAATCGT ATGCCTCATCACAGCCGTCGGAATCATTCGAATACTTTAGTGATGAAAATCCTAATGCGTGTTCGGTCATGTGA
Protein sequence (LotjaGi5g1v0224400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAATESKAEAKEVEQHSEPLTGKITTLRVSIHCEGCKRKVKKILQSVYGVDDINIDLRQHKVVVTGNVDSYTLIKRLTKA GKHAELWPEKAESKKKKEKPAENREKQSDPESREETTQSGEHHEETVKVVDASKNVEAATTAVKNSDGCGGVNVNKANEG GVTGKPGVQFQEPKAAEVRQTVVLPAGPVTGKKVSVAVQVPQEIEAPGNEQIGGGGGGGSTGEKKKKKKGKAKVNSNNGN EGVAAVTAEHPGGGEAAATGGLGNRSKGQGHVHVPGPTTSVPISRPANESPPHHHMYPPDNVSAPRHHMYPPHYYAPPQP APVYTMSYHTTHPSSSSGYGAAYYAPPQPYSYAHVVHPGNEMEPPPYTYESESYASSQPSESFEYFSDENPNACSVM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 397 | 392 | 1.0E-87 | – | |
| PANTHER | 6 | 397 | 392 | 1.0E-87 | – | |
| SUPERFAMILY | 22 | 88 | 67 | 2.75E-15 | ||
| Gene3D | 22 | 86 | 65 | 2.2E-18 | – | |
| ProSiteProfiles | 23 | 86 | 64 | 11.613 | ||
| Pfam | 26 | 83 | 58 | 1.8E-13 | ||
| CDD | 26 | 85 | 60 | 7.71354E-11 | ||
| MobiDBLite | 82 | 131 | 50 | - | – | |
| MobiDBLite | 82 | 133 | 52 | - | – | |
| MobiDBLite | 205 | 278 | 74 | - | – | |
| MobiDBLite | 360 | 397 | 38 | - | – | |
| MobiDBLite | 370 | 397 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi5g1v0224400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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