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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0225600 |
| Transcript ID | LotjaGi5g1v0225600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Epoxide hydrolase 2; TAIR: AT3G05600.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|I6YGS0|EPHA_MYCTU Epoxide hydrolase A; TrEMBL-Plants: tr|I3T2J8|I3T2J8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0225600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:53220238..53222399) extracted from Lotus japonicus Gifu genome v1.2.
GATTCCTCTCTCCGAACCCACATTGCATTGGATGCCAATGGCTTTACCCCTCTCTCACGTACATGACAAAGACTTGTCAC ATTCAAGTCTGACTGGCTGACTTACACTTCCCAAGACCCTCAATTATCTCCAGCAGACCCTCAATTAAAAATACAATTAA AAATACAATCAATATCAAATGGATAGATTATCTGTAGGAACTAATGCACTCGTAACATGCATGTAGCTTAGAAGAAAACC TCACCCTCCAAGCTTATAAATATAGGCTTTAGGACCTGACTTTGGACTTAGGAGGTATATAGCACATAGAATAAGAGAGA TGGAGAGCATAAAGCACAGAACAGTGCAAGTAAATGGCATTAAGATGCATGTTGCAGAGAAAGGAGAAGGCCCAGTGGTG CTGTTCTTGCACGGCTTCCCTGAGCTCTGGTACTCCTGGCGCCACCAGATTCTGGCTCTCAGCTCTCAGGGATACCGTGC TGTGGCCCCGGATCTCCGGGGCTACGGTGACACTGAAGCACCCACTTCGGTGGCAAGCTACAATTGCTTTAACATTGTTG GTGACATTGTTGCTCTCATTGATTCTCTTGGCGTTGACCAAGTGTTCCTTGTTGGCCATGATTGGGGCGCCATCATTGGC TGGTATGTCTGTTTGTTCCGACCAGACAAAATCAAGGCCTATGTTTGCCTCAGCGTCGCCTACCGGAGCTTCGTCCGATC AGCAGATTCGCAAGTAAAAATCGTGGATGCTTTTCGTGCCTTATATGGAGATGACTTTTATGTATGCAGATTTCAGGTAA TTTACTAGCTACTAGCTAGTATACGGTTTTCATAATAGTGGCAGACATCTGACACTTGCAATTTGTGTTGACGGTTACTA TTCTGTAGTTCAGCAATCATTTTTGTTGTATCAATTGAACCTAATCAACCTATCTGATCAACTAAACTGCATGCTATGAT CTTGGGTTTTCTGGTGATTATTAGGAACCAGGGAAGATGGAAGCTGAAATTGCTGAAGTTGGCACAGAATATATGCACAA GAACATACTCACAATGCGAAAAACAGGTCCCCCAATTTTTCCAAAAGGGGAGTTTGGAACTGGGTTCAATCCTGATATGC CAGAGAACTTGCCCTCTTGGCTCTCACAGCAAGATCTTGATTATTATGTTAGTCAATTTAACAAGACAGGCTTCTCTGGA GCGTTGAACTACTATAGAAATCTCAACTTGTAAGTTTCTTTTATGTTGTTTTCTTATGTATTATGTATCAAAAGCAAGTC TTTTTATATAACTTAAATGAAAGAAAAAAAAATGAATCTTACAGAACAGTTGATGAACCGGGTACTTGGAATTTTAATTT GATATTAGAGCTTCGGTCACAAAGTAATGGTTTTGTTATTCCAGAATTGATTATGAGGAAATAGAATTATTTCAAACATG GTACATTATTTTTGTGGCTCATAAAGTAATGGTTAATATGATGATCACTTCCATAATTTTTCAGGAATTGGGAGCTCACA GCACCTTGGACTGGAGTACCCATTACCAATGTACCAGTGAAGTTCATCGTAGGGGATGTTGACATAGCATACAATTTCTC AGGGATGAAGGAGTATATCCACAATGGTGGATTCAAGAAAGATGTGCCAGGTTTGGAGGAAGTGGTTGTGCAGGAAGGGG TAGCACACTTTAACAACCAAGAAGCAGCTGAGGATGTGAGCAATCACATTTATGACTTCATTAAGAAGTTCTGATTTCAG CCATCTTGATTCCACAGCCTGCTCTCTCTCTCTTTCTCTCTCTAGTCTTGTTGAATAAAACAGTGTCTTACTGGTGTTAA ACCTGCTCATTTGTTCTGAGCTTCAATTTCACTTGTTTTTCCTTAATAATAAGGTTCCTTTATGCTCCTATCTACTATCT GGATATACCAAGAAAGATGTACGGTCTAATGAGGCTACTATCTTCAGAGGTACTGTCAGTGTATGTGAAGTTATGATTCC TCAATGTATGAGATCCCTTTTATTGGCAACACGCCAACACTAAGATAATAATTATGTATTCTTGATTTCTATTATCTCAT TTACGTGTTTTGGTTTCAAATCTTAATGATCTTTAGGATTGTTTGAGATGCATGATAAGAAGATACAATAGGATAAAACA AG
CDS sequence (LotjaGi5g1v0225600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGCATAAAGCACAGAACAGTGCAAGTAAATGGCATTAAGATGCATGTTGCAGAGAAAGGAGAAGGCCCAGTGGT GCTGTTCTTGCACGGCTTCCCTGAGCTCTGGTACTCCTGGCGCCACCAGATTCTGGCTCTCAGCTCTCAGGGATACCGTG CTGTGGCCCCGGATCTCCGGGGCTACGGTGACACTGAAGCACCCACTTCGGTGGCAAGCTACAATTGCTTTAACATTGTT GGTGACATTGTTGCTCTCATTGATTCTCTTGGCGTTGACCAAGTGTTCCTTGTTGGCCATGATTGGGGCGCCATCATTGG CTGGTATGTCTGTTTGTTCCGACCAGACAAAATCAAGGCCTATGTTTGCCTCAGCGTCGCCTACCGGAGCTTCGTCCGAT CAGCAGATTCGCAAGTAAAAATCGTGGATGCTTTTCGTGCCTTATATGGAGATGACTTTTATGTATGCAGATTTCAGGAA CCAGGGAAGATGGAAGCTGAAATTGCTGAAGTTGGCACAGAATATATGCACAAGAACATACTCACAATGCGAAAAACAGG TCCCCCAATTTTTCCAAAAGGGGAGTTTGGAACTGGGTTCAATCCTGATATGCCAGAGAACTTGCCCTCTTGGCTCTCAC AGCAAGATCTTGATTATTATGTTAGTCAATTTAACAAGACAGGCTTCTCTGGAGCGTTGAACTACTATAGAAATCTCAAC TTGAATTGGGAGCTCACAGCACCTTGGACTGGAGTACCCATTACCAATGTACCAGTGAAGTTCATCGTAGGGGATGTTGA CATAGCATACAATTTCTCAGGGATGAAGGAGTATATCCACAATGGTGGATTCAAGAAAGATGTGCCAGGTTTGGAGGAAG TGGTTGTGCAGGAAGGGGTAGCACACTTTAACAACCAAGAAGCAGCTGAGGATGTGAGCAATCACATTTATGACTTCATT AAGAAGTTCTGA
Protein sequence (LotjaGi5g1v0225600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESIKHRTVQVNGIKMHVAEKGEGPVVLFLHGFPELWYSWRHQILALSSQGYRAVAPDLRGYGDTEAPTSVASYNCFNIV GDIVALIDSLGVDQVFLVGHDWGAIIGWYVCLFRPDKIKAYVCLSVAYRSFVRSADSQVKIVDAFRALYGDDFYVCRFQE PGKMEAEIAEVGTEYMHKNILTMRKTGPPIFPKGEFGTGFNPDMPENLPSWLSQQDLDYYVSQFNKTGFSGALNYYRNLN LNWELTAPWTGVPITNVPVKFIVGDVDIAYNFSGMKEYIHNGGFKKDVPGLEEVVVQEGVAHFNNQEAAEDVSNHIYDFI KKF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 323 | 323 | 3.2E-99 | ||
| SUPERFAMILY | 2 | 322 | 321 | 2.97E-66 | ||
| PANTHER | 2 | 322 | 321 | 2.1E-187 | – | |
| PANTHER | 2 | 322 | 321 | 2.1E-187 | – | |
| Pfam | 25 | 130 | 106 | 4.6E-21 | ||
| PRINTS | 31 | 49 | 19 | 1.6E-41 | ||
| PRINTS | 51 | 66 | 16 | 1.6E-41 | ||
| PRINTS | 97 | 110 | 14 | 1.6E-41 | ||
| PRINTS | 111 | 124 | 14 | 1.6E-41 | ||
| PRINTS | 257 | 273 | 17 | 1.6E-41 | ||
| PRINTS | 297 | 319 | 23 | 1.6E-41 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi5g1v0225600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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