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LotjaGi5g1v0225800.1

Overview

Field Value
Gene ID LotjaGi5g1v0225800
Transcript ID LotjaGi5g1v0225800.1
Lotus japonicus genome version Gifu v1.2
Description Epoxide hydrolase 2; TAIR: AT3G05600.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|I6YGS0|EPHA_MYCTU Epoxide hydrolase A; TrEMBL-Plants: tr|I3SHF8|I3SHF8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0225800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:53225807..53229501) extracted from Lotus japonicus Gifu genome v1.2.

AGTAATGTTAGTAAATTAGTTCCTTCACCAGGGTTTGAACCCTGACCCTTCACCCTTCATTCCCTTAGCTCACCTATTAC AAGTCATCACATCCTTATTGACTGTTTTTATCACTTAATCAAATATTCAATAGTGTAATAACTTATTCTAAATGTATCAT TTACTATCACTTATTTCTTCCATGTGTCTCTACTCTCTAAGCCATCTTTATTGACCATAATAAGATTATAGGAAAGAAAG TAAAAGAAATGAGAGAAAAGACTCATAAGATGAAATGATTTTGGTATCCTCGACATTACTCAGTCAAAGATACTGAAATT TTCAATTGGATTCTTCAACCCTGAACGCAGTGCACAAAGGTAAACAGACTAACAGAGAACCAGAGAGATGGAGAGCATAG TGCACAGAACAGTAGAAGTCAATGGCATCAAGATGCATGTTGCAGAGAAAGGAGAAGGCCCAGTAGTTTTATTCCTACAC GGCTTCCCTGAGCTCTGGTACTCCTGGCGCCACCAGATTCTGTCTCTCAGCTCCAGGGGATACCGTGCTGTGGCCCCTGA TCTCCGCGGCTACGGTGACACCGAAGCACCATCTTCAGTGACCAGCTATACATGCTTTCACCTTGTCGGTGACATCATTG CTCTCATTGATTCTCTAGGAGTTGACAAAGTATACCTTGTCGGTCATGATTGGGGTGCTGTTCTTGGATGGTATGTCTGC TTGTTCCGACCAGACAGAATCAAAGCCTATGTTTGCCTTGGTGTTACTTTCCGACCCTTCCTTGCAAGGAACCCAAATGT CAAAACATTAGATGGGTTTCGTGCCATGTTTGGAGATGACTTTTACATATGCAGATTTCAGGTTATTTTATTTTACTACT AGTAGAGTTTCAAAATCTCTTCATTTTGGTTATTTTGCTATTAGTTAATGAGTCCTTCTTAATTTGCTAGTGGGCTTTGG CTTTTGATTGATTAGGAACCAGGAAAGATGGAAGCTGAGTTTGCTGAAGTTGACACTGCATATCTGTTCAAGAACATACT CACATTGCGAGAATCGGGTCCCCCAATTTTCCCAAAAGGAGAGTATGGAACTGGGTTTAATCCCAATACTCCAGAGACCT TGCCATCTTGGCTCTCACAACAAGATCTTGATTACTATGTTAGTAAATTCAACAAGACTGGCTTCTCTGGAGGGTTGAAT TACTACAGAAATCTCAACTTGTAAGTTCTTATTTTTGTGTGTTTTTTATACATTTGTGATTATTTTCCTAACTCCTATGA GAATGTATTAAAAAGTCAGTGTTTTTGTGGTAACATGTTTTAAAAAATCAATTTTTTTGCTAGATATAGAACCTGGTAGT TCGAAATTCATAATCTAATACTCTTAACAGAGATAGGAAAACAGATGATGAAATGGGGACTTGGAATTCAATATGGTATT AGAGCTTCAATCATTAATAACAGGAAGACTGGCTGAACCATAATCAATGCCTTATCGCACTAACTTAGTAACTTAGGTCG GCTATATAGATCGCAAGTTCATTTTAAAGATATCGGCAAGCTTTACATTGGCTGTAACTGGACTTAGGACCGGCTATGCA AAAGCATAGGCTGAGTTGAAAACTGACTGAATCATGGTGGATTAATTTTGTGGCTCATAAGGTAGTGGTTAATAGGATAT TCAATTCCATGATTTTGCAGGAATTGGGAGCTCACAGCACCTTGGACTGGAGTAGGTATCACCGGTGTGCCGGTGAAGTT CATTGTAGGGAATGTTGACTTGTCATACGGTTCCTCAGAGATGAGGGACTATATCCACAATGGTGGGTTTAAGAAAGATG TGCCAAGTTTGGAGGAAGTGGTTGTGCAGGAAGGGGTAGCACACTTCAACAACCAAGAAGCAGCAGAGGATGTGAGCAAT CACATTTATGAATTTATTAAGAAGTTCTGATCTGAGCCATCTTGATTCCATTCCATATCTTGCTCTGGAACCCCTCTCTA AATAAAACAGTGATCCTAAAATATCAAGATCGATGGTATCAAACTGAGCTCATTCTTCAGAGATTGTGTGTGTGCAGTTG TTAATTCTCATTGTATTTCCATTGGCACCACTCAAATAACAATTGTGGATACTAGCTATTATCTTCTTTAAGTCTATTGA TTTCAAATCTTAATGATCTTTACTAGTGTCTTATCCACTATTCTTGAGACTTTTCATTTTGTTTCACTATAGACAAGTCG GTCGGACTTTCATCTCAATTCTTAAGAAGAGTTTTGTTTATTTTTATATTAAACTGCATACTAAGTTTTCGTGGTGGCCG TTACCTGTAGCTTGATGGTGTCCATGCTAGTGCCAAACTCTTGTTGGTGAATTGGAGAAGTAGGCACACGATTTCCCCAC ACCTACACCGGATAAAACGTAAGCTTGGGGTTATAATCAAAGACCCAATATGAAGAAAATAAGAGGGTTGAAGAAAGCAG TGTTACATTTTACGCAAAATCAGAGATTAAGACAATGTTGTGAAAGTAAAATATGAAATTTGAAAGTCGAATAAAAGAGA TTCCAAAGGACTTGAACGGAGGATGTTTCAAATGAGAGAAGAAGGGAAGTCACAGAGACTATATAGAAATTACAAAACAG CTATGAGGAAGCGAGTAAAGAGTTTGAAAGCCGTGATGAGAATCAGAAAATTCTGGAATGTGAAAAAGCCACACAAATGA GATCATCAAGAAAAGCATCAACAATGATGATTGAAAGCAATGAACGACCAAGATTAATTTCAGTCCATGGGAAATTAATT ATTCACAAATTTACATATATGTCAACGGGAAAATATTCATCCATGTGTATTGAATTATTGAATAATGTTTTACTCTCAAA ACTGTCAAAACTTCTTCTTTATTATAGATATATGGATGGATATAGATATTGATATAGACATAGATTAGAACACATTTTTT ATTTAGAAATTGCATCTCCATAGGGATTGTGGAGAACAACATGTGGAGTAGCATCAATGTTTATTTATCCGTACATAAGA TGTTACATTAACCACCTAGAGCATTTAACTTTGGTAGTAGACTTAGATAGATTGACGTGGTGTAAGAATGACTTGGAGTG GAGAGGCTTTAACGTTAGTTATCCCGGTTTTTTCAACCATATCCACATGTCCTCCATCAATAGTTACTATTTCAAATTCA TGCAATAGAGTAGCAAGTGTCATTTGCATTAGCTGAAGAGCGAAAGAGATTCCAGGACATATTCTTCTACCTGCACTAAA TGGGATGAGCTCAAAATGTTTTCCCTTAAGATCAATGTCCTTATGGGTTGTGAGGAATCTCTCTGGGCGAAACTCCAATA GATCAGAATATAGTGAGGGATCTTGTTGAAGTTTTGAAATATTAGTCAAGAGACGTGTGTGAGCAGGCACATGGTATCCA CCCACAATACAATCTTCCATGGACTCGTGAGGCACACTAAGTGGTACAGTTGGGTATAAGCGTAATGTTTCCTTGACGAT GGCTTGTAGATACTCCAACTTCTCAAAGTCTGATTCTCCTATCGCATTTTCCCTACCAATTTGTGTGTCTAACTCATGTG TAGCCTTATTTAGGACTTCACGGTTGTTGAGAAGTAAGGAAAGAGCCCAAGTCAATGTTCCCGTCATAGTGTCTGTGCCA GCTAAAATTAATTGC
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0225800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGAGCATAGTGCACAGAACAGTAGAAGTCAATGGCATCAAGATGCATGTTGCAGAGAAAGGAGAAGGCCCAGTAGT TTTATTCCTACACGGCTTCCCTGAGCTCTGGTACTCCTGGCGCCACCAGATTCTGTCTCTCAGCTCCAGGGGATACCGTG CTGTGGCCCCTGATCTCCGCGGCTACGGTGACACCGAAGCACCATCTTCAGTGACCAGCTATACATGCTTTCACCTTGTC GGTGACATCATTGCTCTCATTGATTCTCTAGGAGTTGACAAAGTATACCTTGTCGGTCATGATTGGGGTGCTGTTCTTGG ATGGTATGTCTGCTTGTTCCGACCAGACAGAATCAAAGCCTATGTTTGCCTTGGTGTTACTTTCCGACCCTTCCTTGCAA GGAACCCAAATGTCAAAACATTAGATGGGTTTCGTGCCATGTTTGGAGATGACTTTTACATATGCAGATTTCAGGAACCA GGAAAGATGGAAGCTGAGTTTGCTGAAGTTGACACTGCATATCTGTTCAAGAACATACTCACATTGCGAGAATCGGGTCC CCCAATTTTCCCAAAAGGAGAGTATGGAACTGGGTTTAATCCCAATACTCCAGAGACCTTGCCATCTTGGCTCTCACAAC AAGATCTTGATTACTATGTTAGTAAATTCAACAAGACTGGCTTCTCTGGAGGGTTGAATTACTACAGAAATCTCAACTTG AATTGGGAGCTCACAGCACCTTGGACTGGAGTAGGTATCACCGGTGTGCCGGTGAAGTTCATTGTAGGGAATGTTGACTT GTCATACGGTTCCTCAGAGATGAGGGACTATATCCACAATGGTGGGTTTAAGAAAGATGTGCCAAGTTTGGAGGAAGTGG TTGTGCAGGAAGGGGTAGCACACTTCAACAACCAAGAAGCAGCAGAGGATGTGAGCAATCACATTTATGAATTTATTAAG AAGTTCTGA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0225800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MESIVHRTVEVNGIKMHVAEKGEGPVVLFLHGFPELWYSWRHQILSLSSRGYRAVAPDLRGYGDTEAPSSVTSYTCFHLV GDIIALIDSLGVDKVYLVGHDWGAVLGWYVCLFRPDRIKAYVCLGVTFRPFLARNPNVKTLDGFRAMFGDDFYICRFQEP GKMEAEFAEVDTAYLFKNILTLRESGPPIFPKGEYGTGFNPNTPETLPSWLSQQDLDYYVSKFNKTGFSGGLNYYRNLNL NWELTAPWTGVGITGVPVKFIVGNVDLSYGSSEMRDYIHNGGFKKDVPSLEEVVVQEGVAHFNNQEAAEDVSNHIYEFIK KF
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.40.50.1820
1 322 322 2.9E-99
IPR029058
PANTHER
PTHR43329
2 321 320 7.5E-195 –
PANTHER
PTHR43329:SF65
2 321 320 7.5E-195 –
SUPERFAMILY
SSF53474
4 321 318 2.66E-64
IPR029058
Pfam
PF00561
25 128 104 1.7E-21
IPR000073
PRINTS
PR00412
31 49 19 2.0E-40
IPR000639
PRINTS
PR00412
51 66 16 2.0E-40
IPR000639
PRINTS
PR00412
97 110 14 2.0E-40
IPR000639
PRINTS
PR00412
111 124 14 2.0E-40
IPR000639
PRINTS
PR00412
256 272 17 2.0E-40
IPR000639
PRINTS
PR00412
296 318 23 2.0E-40
IPR000639

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0225800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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