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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0225900 |
| Transcript ID | LotjaGi5g1v0225900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Epoxide hydrolase 2; TAIR: AT4G02340.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|I6YGS0|EPHA_MYCTU Epoxide hydrolase A; TrEMBL-Plants: tr|I3SHF8|I3SHF8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0225900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:53230410..53234266) extracted from Lotus japonicus Gifu genome v1.2.
TTCTAGCAAGGCAACCCACTCTAGTAATAGGCTTAGGTTGTTTTCTTCTGCCACTATTATGCATATGCTTCTGATGCCTT TGTCCAGCCCTATTGCACACCACCTGTCGTGAGATAATCTTGCCATCATCATCCTTGTATACATCATCTTTTCTTGGAGA GAATCCACGGATACGAGCATATTTAGAATAGAATTCACATGCTTCCTCCTCAGAAGAGAAATCCATCCCTCTAATGTCGT CTGCAGACAATTCAGTAATCCTTTTCATGACTTTAACTTCTACATCAGAGTTTTTTTGACTGTCATTTCCAGTTTCAAAC ATCTCATCGACATCCACAAAATTTTCCCCATCATTATCCCCTTCATTCACACCCTGCTTCAAACCGTTGGCAGGGCTAGA ATTCAGACTATCATCCTCATCGATGATATAAAGCTCGTCATCAAACGGATTAAGCCAGTTATCTCCTGAAGAATCATTCA TTTTCCCAACTCTGAAATAAAATCAAAACCGACGATTCAAGACATTGCTACCTAATAAAACCATACTTAGGGTAAAAATA ATTAAAAATCATACCAGTTCAGGTAGCCGCAACTTCGATCCCTGCTCAATAGAGTAGTGTACAAGTCGAAACTCCCGTAT CAAAATCTTACAGCGACACAGACGAGCACAACCAAATTCATCAGTGAAAGCACAGTCGAAGAAGAATCACCTGTGAAACC CTCGAAATCACACAAACCAAAGCCTACCGAAGACGACAGTTCAAATAGATGAAATGAAATCAGGAAATCAATCTAGGTGA CTTCAGGAACAAAACCTATCTCATGAACCCTAATCTAATCTTTCACGAACCCAGAATGTAAATTACCTCCAAGATCTTTT TAACTTAGCTTTTGTTTTCTTTTACCTTAGCTAAGGGACCAACTTATAAATAAATGAAGTTAGGGGATAAATTCATGATT TAAGAAAGGCTACTGCTATTATTCCGGATTTAAAAAATCGAAACAAATGAAATAATGTTATTGGTCCAAGCAATTCCTGT ACGCTACCCATAAAAAAGTTGCGGGCACCACATAAATTGCCATCATATTATTATATCAGCACAAAACAAGCTGTCTACCA CCTCAAAGATACTGAAATATTTTCTGTCTGGCTTCTTCTTCAATCACTGAATCCAGTGGCAGCAAGGCAAACAGAGAACG AGAACAGAGAGATGGAGAGCATAGTGCACAGAACAGTGGAAGTAAATGGCATCAAGATGCATGTTGCAGAGAAAGGAGAA GGCCCCGTGGTTCTGTTCCTACACGGCTTCCCTGAACTCTGGTACTCCTGGCGCCACCAGATTCTGTCTCTCAGCTCCCG GGGATACCGTGCGGTGGCCCCTGATCTCCGCGGCTACGGCGACACCGAAGCACCGTCTTCAGTGACCAGCTACACATGCT TTCACCTTGTCGGTGACATCATTGCTCTCATTGATTCTCTAGGAGTTGACAAAGTATACCTTGTCGGTCATGATTGGGGT GCTGTTCTTGGATGGTATGTCTGCTTGTTCCGACCAGACAGAATCAAAGCCTATGTTTGCCTCAGTGTTCCTATCCGAGG CTTCCTCCGAATTGATTCGCCAGTGAAAACCGTGGATGGTTTTCGTGCCGTGTATGGAGATGACTTCTATGTGTGCAGAT TTCAGGTAAAGGTTTCAAATTCTCTGCTTTTTCACATTGATGGATTGAATGTGTCTATATCAAATGAATCTGTTATGGTC TTGGGATTTGAATCTGTTGATTAATTAGGAACCTGGAAAGATGGAAGCTGAGTTTGCTGAAGTTGACACTGCGTATCTGT TCAAGAACATTCTCACTATGCGAAAAACTGGTCCCCCAGTTTTCCCAAAAGGAGAGTATGGAACTGGTTTTAATCCGGAT GTGCCAGAGACCTTGCCATCTTGGCTCTCAGAAGAAGATCTTGAATATTTTGCTAGCAAATTCAAGAAAACAGGATTCTC TGGAGGGTTAAACTACTATAGAAATCTCAACTTGTAAGTTCCCATTTTTTGTATTTTTTATGTATATTATGTATCAAAAT GTCGGTCAATATGTGTCTTTTTGAATGAAGGCTCAGTTCAATTTCGTCTTGTAAGTGTCAGACAAGTTGATATCTCTGAC GGTCTCTGATTGTGTAAAATGTCTGGGAAGTTAGTCTTTATGGTAAGATAAAACGTCGGTCAAAACCTGACTCACGTACA TTTAACACAATTAGGGATTGCAGAAGTATTCCCTTTTTCTGGAACTACTTTATCCTAAGCTTACACTTTATAGGGACGAA ATTGAGCATTTTCTTTTGTCTTTTTCTTATAACTTATTGAAGAAAATAAATCTTTTTTGAAAAGGAAAATATACCAATAT AGATGCAGAGCCTAGTAGCTTGAATTTTAGAATCTAACATTCTTAACAGAGATATATAAACAGCAGATGAAATGAGGACT TGGAATGTAATATGATATTAGAGCTCCAGTCACAAAAAAATAGGAAGACTTAATTGTTCAATTGATTCCAAAGTCAGAAT TAATTATGGAGAGAAGTTTGTGTGAGTAGCTTATGTATTGCATAATTGATTCGGAGAAAATAGACATTAATTCAAGCCTG CTACTAACCATTGTAAATTATTTTTCTGGCTCATAAAGTAGTACTGTTAATAGGATATTCAATTCCATGATTTGCAGGAA TTGGGAGCTCACAGCACCTTGGACTGGAGTAGGCATTACCAATGTGCCAGTAAAGTTCATTGTAGGGGATGTTGACATAA CATACAATTTCACAGGGATGAAGGATTATATCCACAAGGGTGGATTCAAGAAAGATGTGCCAACTTTGAAGGAAGTGGTT GTGCAGGAAGGGGTAGCACACTTCATCAACCAAGAAGCAGCTGAGGATGTGAGCAATCACATTTATGACTTCATTAAGAA GTTCTGATCTGAGGCATTTGATTCCAAATTAAGCTTGTTCTGGAGCCGCTCTCTCTGAAGTTTAGTTGAATAAGACGGTG TTTTATTGTTCAAGTTGCAAAGCTCATTTGTTCTGAGCTTCAGTTTCACTTTCTTTCTTCTTAATAATAATGTTCTCTCA AGAATTCCTTTAGTATAATTAAGATCCAGATTGATCGCATCAAGCTGAGTTCAGTCTTTAGAGATGGTATGGGTGTAGTT GTCATTTCTCATTGTATCTTAGCCTTTTTATTGGCACCATGCAAATTAATTAATAATTAGGATACTGATATCAATCTCGA TTACGTGACTACTTCTATTGATTTCAAATCTTAATGGTCTCAAGGGCTCTAGACATAATAAGGAGATACAATAGGATAGG ATAAATTAATCATATCTTAATATCTTATTTTAATCTATGTTGTATGTTCTGCGCACAAGATATGATTCGATCGGGCATGG TTTAACATGGTTTTACTGGTTAATTCCAAAAGAGTTAACATCTCCATTATTGTAAACCCTTTCTTACCCAGTTTTTGGAC TCGTACACCATCGAGGGAGGTCTCCCCAATGTAATTTGCAACGTCTTCAATAGCATGTATATACTTCCAAAAGATCTCCT TCTTACTAACATTAGGAATGGAGATCATAAAATGGATTTTTCAAAGTATTTACATTGGGTTGAGAATCAGGGCCGGATCT GCTTTAGAAACCTTGAGAGCAATTGCCCCACAAAGTTTCTAGTGTTGTCTTCATTTTTATTTTATTTTTTGAATATTGTC TTAGTGCTTTCTGAATACTACATGTATTTTTTATATATATTTTCCCCCACTAAATTTTAATACTATTTGTTTATATATAT GTGTATGTTTTTTATCC
CDS sequence (LotjaGi5g1v0225900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGCATAGTGCACAGAACAGTGGAAGTAAATGGCATCAAGATGCATGTTGCAGAGAAAGGAGAAGGCCCCGTGGT TCTGTTCCTACACGGCTTCCCTGAACTCTGGTACTCCTGGCGCCACCAGATTCTGTCTCTCAGCTCCCGGGGATACCGTG CGGTGGCCCCTGATCTCCGCGGCTACGGCGACACCGAAGCACCGTCTTCAGTGACCAGCTACACATGCTTTCACCTTGTC GGTGACATCATTGCTCTCATTGATTCTCTAGGAGTTGACAAAGTATACCTTGTCGGTCATGATTGGGGTGCTGTTCTTGG ATGGTATGTCTGCTTGTTCCGACCAGACAGAATCAAAGCCTATGTTTGCCTCAGTGTTCCTATCCGAGGCTTCCTCCGAA TTGATTCGCCAGTGAAAACCGTGGATGGTTTTCGTGCCGTGTATGGAGATGACTTCTATGTGTGCAGATTTCAGGAACCT GGAAAGATGGAAGCTGAGTTTGCTGAAGTTGACACTGCGTATCTGTTCAAGAACATTCTCACTATGCGAAAAACTGGTCC CCCAGTTTTCCCAAAAGGAGAGTATGGAACTGGTTTTAATCCGGATGTGCCAGAGACCTTGCCATCTTGGCTCTCAGAAG AAGATCTTGAATATTTTGCTAGCAAATTCAAGAAAACAGGATTCTCTGGAGGGTTAAACTACTATAGAAATCTCAACTTG AATTGGGAGCTCACAGCACCTTGGACTGGAGTAGGCATTACCAATGTGCCAGTAAAGTTCATTGTAGGGGATGTTGACAT AACATACAATTTCACAGGGATGAAGGATTATATCCACAAGGGTGGATTCAAGAAAGATGTGCCAACTTTGAAGGAAGTGG TTGTGCAGGAAGGGGTAGCACACTTCATCAACCAAGAAGCAGCTGAGGATGTGAGCAATCACATTTATGACTTCATTAAG AAGTTCTGA
Protein sequence (LotjaGi5g1v0225900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESIVHRTVEVNGIKMHVAEKGEGPVVLFLHGFPELWYSWRHQILSLSSRGYRAVAPDLRGYGDTEAPSSVTSYTCFHLV GDIIALIDSLGVDKVYLVGHDWGAVLGWYVCLFRPDRIKAYVCLSVPIRGFLRIDSPVKTVDGFRAVYGDDFYVCRFQEP GKMEAEFAEVDTAYLFKNILTMRKTGPPVFPKGEYGTGFNPDVPETLPSWLSEEDLEYFASKFKKTGFSGGLNYYRNLNL NWELTAPWTGVGITNVPVKFIVGDVDITYNFTGMKDYIHKGGFKKDVPTLKEVVVQEGVAHFINQEAAEDVSNHIYDFIK KF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 322 | 322 | 7.9E-101 | ||
| PANTHER | 2 | 321 | 320 | 4.0E-192 | – | |
| PANTHER | 2 | 321 | 320 | 4.0E-192 | – | |
| SUPERFAMILY | 4 | 321 | 318 | 2.59E-66 | ||
| Pfam | 25 | 126 | 102 | 4.6E-21 | ||
| PRINTS | 31 | 49 | 19 | 1.3E-41 | ||
| PRINTS | 51 | 66 | 16 | 1.3E-41 | ||
| PRINTS | 97 | 110 | 14 | 1.3E-41 | ||
| PRINTS | 111 | 124 | 14 | 1.3E-41 | ||
| PRINTS | 256 | 272 | 17 | 1.3E-41 | ||
| PRINTS | 296 | 318 | 23 | 1.3E-41 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi5g1v0225900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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