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LotjaGi5g1v0226700.1

Overview

Field Value
Gene ID LotjaGi5g1v0226700
Transcript ID LotjaGi5g1v0226700.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Beta-glucosidase; TAIR: AT3G06510.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q93Y07|SFR2_ARATH Galactolipid galactosyltransferase SFR2, chloroplastic; TrEMBL-Plants: tr|A0A067K812|A0A067K812_JATCU Uncharacterized protein; Found in the gene: LotjaGi5g1v0226700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:53384691..53392812) extracted from Lotus japonicus Gifu genome v1.2.

AAGAAATAAGAACTAGCATTGGAGATGCTCTTAGAGATGTACATACCTTTGATAACAATATTCACAATCGCTTCACTGAT TCACTCGCTTAGATAAGACAATTAGAATAGAATAAATCTTTGAATTCACACGTAATGAACATAAAGCATATTCAAACATG TGTAAAGATTATAAATAAACTTTGAATAAAAAGATGAATTACTATTAAGAGCAAAATCTCAGATATGCAAACGCATGAAA ATTAAGAACCCTCAAACTTATATAAAAGTTGAGCAAGCCATAAGAAAAATAACTAAGATAACGACTTGAATAAAAGAGGT GAGATGAGGTGCCTAACAAGGGCCTCAACTAGCCTATTTATACTAAGGCTTAAATATGTTTGAGGTCCCTCTAAAATAGG GTGTTTTGGTTAAGACTCCTACAATTATTTTTTTGGAATACACCCTTAAGTGCAAAATAATAGTGTCGTTTAGATCCCTG CCGTTAGAAGAATAATTAGTCTACTAACGGAGGATTGCCAAGTCAGCACAAGAGAAAATGTTGGAAAATTCAAAATGTGT GGTCAAAGGGATTTGAATCCCACACCTGTAGCTTTAACCACACTTGCCCCACCACTAAGCTACATGATAATTTTGAGTTA TTGGTAAGGTTTTATACTCCCTCCGTTCCTATTTATCTGTCCAAGAAGAGAAGGTTCACACAAATTAAGGAAAGTAATTA ATTGTGTTGATTTTCATAAAAGTATTATTTATTTTCCTATATAACCCTTAAGAATGTATTTTATCTTTCTTCATTTATTG TTTTTGTAAGGGCATTTCTTGGAAAAACATCAATTAATACTCTCTTGAAACTCTAAGTGGATAGATATATAGGAACACAA ATTTTTCTTCAAAGTGGACAGTTAATAAGGAACGGGGGAGTACCTATTTAAACTTATTATCTCTTCATCTTTTCCACATA CTCATCTTCCAGAATCACCACCAAACCCAAAACACAATATAATACCAATCATAGCCACCATTGCCAAGGTAAGGTCGCAA TGGGTTTTCCTAAGTCACCAGCGCCTCCTACCCGTACCCCTCCGCCACCAAATCCAAATTCTCCTTCCCTTGCTCCTTTG GTGCTTTCTTCCCACGCTCTTCCGCTCAGGTTCTTCCCCCGGATGTCACTAACCTCCTCCGCCTCGTCGAGGACCTCTAC AACCCAAACAGCCACACTCGAACAAAGATGAAGGAAGAACATAACTCATACCAGATGACAGAAAACAAAAGACATTTATG TTGCACTTAATAGGAAAGATGAAGAATCAGGCAATTAGCAACCATTTCGGAGATGTGAGTGCTAGAGAAATAAGGCTCTC ACCATCGCACGCAAATTGACGGGGATGCTCGTGCGTGAACGACGGTGCTGCTCACGAGGCCTCCAAGACCACCGTCGTGG TTGCGCCAGAACCACCACGCCAAGTCGTTGCTTCCCCTCCGATCTCGTCTACCTGTTCACGATCATTCTCCTTCGATCTA GATTCAGTTCGACCTCTCTCTCCCCAAAAAAAGAGTATGTTGCTGAACACTCAAGCACTCGTGGCTCCCACACAAAAAAA AGTTTTAAAGAAATTTCCACAAATATTTAAAAAGAGATAAAAATAATATAATAAAAATGCATAAGTTTTCAAATTTCACG AGGACACGCTCATTTGGCGGGTTCTTTTTAAATATAAAAGCAAACTCTTCCAACAAATTTCATTTCAGACACGACACGAT TCAATCTCTCTCCTCTGTTTCTCTCCCTCTCTACTTCTTCCATGTCGCCGATATCATTGTTCATCGCCTCCACCCAACTC CTCGGAACCCTAGTAACTCTCACCGTAGCCGCCAAAGCCTTCAATTTCTCGCGCTTCCTCCGCCCTCCGATCGGCGGTTC TGTTGCCCGATCTCACCGTTCTGGTAGGTAAATCTAACATTTCATTGTTTCTCTCTTTCACATTGATCATTTTCCGTTAA TTTTGTACAGATTCAGCACCACCACACCATGATGCTTCCGGTGACGGTCAAATTTCAGCACCAGCACACGATGATGATGA TGATGATGATGATGATGCTTCTGGTCACGGTCATGCTTCCGGTTCTTCTATATCCGGTATTTCGGCGAGGACGTCGATGA AGTTTTTCCTCACCTCCACCAAGCTTGTGGGAGCTCTGGTCACTCTCGTGACTGTCGTTGTTGCGGTCAAGACCTACATC TTCTCCTGTTTCCGCCGAAACTACCTCCGCCCCTTCCGCTCCCCGATCGACGAATCCGCCAACATTCTTGCAAAATTTGA CGGTTAGTGAGCACAATCGTTCATTCATTCTCTTCATTCTACGTGATGAACTTAACACTTGTTGTAATCTTGTGTAGACG GATTTTTCTTCGGTCTCGCTACAGCACCGGCGCATGTTGAAGATGATCTCGATGATGCTTGGTTGCAGTTTGTACAACAA ACGAGTGGGGGTGCTCATAACGTAGCTGCTTGGCACAATGTGCCTAATCCGTAAGTTCATACATGTGTAATGTAATTAAT GTTGTATTTAATTAATGTTATATGTGAACGTTCTCTGATTTTGCTTTTCAAAATATTAATTATGCATAAATTAATTAGAG TGAGTAATGACTGATTTTTTACTATAAATTGAAAAGAGTTTTAATTTTGGAAAATAGTACTATTTGTTTTTCTATTAAAG TAATATCTGATTTGTAGCAACATTGAAATTAAAACTGTCTGATTTCTAGGGAGGAGAGGTTAAAGTTTTGGACTCAGCCT AATAGAGAACTACAGTTGGCCAAGAATACTGGTATTACTGTTTTTCGCATGGGAATAGATTGGTCAAGAATCATGCCAAA GGAGCCAGAAGGAAACAATCCTCTAGAATCTGTAAGCGCGGTTCTGACCTTGCATGATGAGGATGTATTATTGTGACATT TATTATTAAGCTTATATGAGTCAGTAGCTTCTGTAATGGAGCTTATGAATATGTTTTTCAATTTTCAAACTTTTATCTTG ATTTCTTATTACAATGAGTTCAACTGGCAGAGATTTTTCTTCTATGAATAACTCACTTGCTGTTCTTTCTTAGATTAACT ATGCTGCATTGGAGAGTTATAAGTTGATTCTCGAAAATGTTCGATCAGATGGAATGAAGGTGATGCTCACTCTTTTCCAT CACTCACTTCCACCTTGGTCTGGTGAGTATGGAGGTTGGAAGGTGGAAAAGACAGTGGATTATTTCATGCTGTTTACCAG GTTAGTTTGACCTTCAGTCACTGTTGTCTGTATGTACCCCATGAATTTTTTTCTGCTGAGGATGTGTGTCAATTTTCAAC TAAGATTAACTGCTAACTTGTGCCAGCCTATCTTTGGTTGTAAATGAATAATGAAGTCCATAGATAGCATCGCATGATTA TTTATTTAATTTCTTGACTGATTGATATCTGCCAGTGTGAGTGTCTATTAGTAAGGAAGTTGGTTAGATTGGTTAGTTGG GTTGGGACAGTTCAAAGGAATAACGCGTGTCGCCAGTAAATAAGAGGGGAGGCTGTGAGGGAGATCTAGCTAATCATTGA GTGAAAATTAGGGCCTTTGGGCAGGGAGGTTTCCTGTGTAATTGGGTTAGTGCCTGTTTCTTTTGATTAGGATAACAGGC TCCAATAATTTTCTATGTAGGATGTGAGCTGTTTACTTAAGCACATTAACAGTAAAAAAATAAAATTTATCATTGAACTT GGACGTCGGCTTGTACTTGAAGATAAAAAGTCAACGGAACTCTTGTGCATTGAGATGAAAGTTTGTTCACGTCGCTTTCA ACTGTTATCTAAACACATACTGCAACTTGCTAGTGTCGATTAAACAATGTGAAGTTCACGTAGAATGGTGAAGTGAAATG TCAGGCTTATCTTAGTTGGCGCTGAATCAAATAAATCAGGAGGACTAGCTTCATTCTAAACAAATTAATGGAGCTACATG TTCATGTGCTGGCCACCATTACATTTGAAGTTAAAATGTGATTTTTTTAAGTGTCATTTAGCAATTAAACAATGCTAACT GTTGAAAACTTCATAGATCAGTGATGATATGTCTTCCTTTTTGTCCCGCAGGCTTATTGTAACCCATTTATCCAAATGGG TAGACTATTGGGTAACCTTCAATGAACCCCATGTCTTCTGCATGCTCACCTATTGTGCTGGAGTTTGGCCAGCTGGGGAT CAACCTAGTAGACTAGATGCATTGCCGACGGGCGGTTTTCGAAAAGCTATGCAATGGATTTCTATTGCACATGCAAATGC ATACGATTACATACATGAAACATTAGTAAGGTGAATGTTTCTATTGCACATGCAAATGCATTTGATTCCTTGGCTGCTTT CTAGTGTACCCAACTTAGTTTACTTGGTTGCTTTTCTAAGTTTAACTATTGTAGTTATTTGAATTCTAAACTAATACAAT CTTTTTGGCAGTTCAAATCCAATAGTGGGGGTTGCCCATCACGTGGCATTCACGCGACCCTATGGACTGTTTGATGTTAG TTGGGTGTCATTGATGAATTCATGTACGCTCTTCTCATATATTGATGGGATATGCAACAAGCTGGACTTCATCGGAATAA ATTACTATGGGCAGGTAAGCTGTAGTATAACTTATTTGATATAGTATAGGCATAGACTCATGACAATTCCTACCTTTGTC TCAGGAAGTTGTTTCTGGTTTTGCGCTGAAACTGGTGGAAGATATGGAGTACAGCGAATCTGGCCGTGGGGTATATCCGG ATGGTTTATACCGGATGCTCCTACACTTCCACGAGAGATACAAGCATCTTAAACTCCCCTTCATAATTACTGAAAACGGA GTTTCAGATGAGACAGATTTGATTCGCAGGCCATATCTCGTGGAGCATTTGCTTGCCATCCATGCCGCCATGACCATGGT TTGACTTTGAAAATTTTATTTTTGCTTATGATTCAAGTTATTAATCTTTTATAAACACTAATTATGTGTTGGAATTGTTT GACAGGGTGTGCCCGTGCTTGGTTATCTGTTCTGGACTATATCTGATAACTGGGAGTGGGCTGATGGATATGGCCCCAAG TTTGGACTTGTTGCCGTTGACCGGGCAAACTCCCTTCAACGGACTAGACGTCCTTCTTACCATCTTTTTTCCGAAGTTAA TTCTAAATTTTGCAGTCTGCTTTTCTTTCTCCATGATATTGCTTTGTGTAGTTTTAGGAGACACTTGTTAGAATATAATA TAAAACCATTCATATGATTCTTACCCAATAACTTAAGCTAATGGATTTATATTTTGGTGTGCTCTTGATTTCAGATTGCG AAGACAGGTAAAATTACGCGTGAAGATCGTGAAGCAGCTTGGGATGAGCTTCAAAGGGCTGCTAAAGAAAAGAAAACCAG ACCATTTTACCGTTGTGTGAACAAACACGGTAAAATGGATTCAGGTATGTACTTTTAATTATCAATTTGACAATGCAAAA TAGAGTTTTTAAGCATAGACACGCAGCATCTGTGGAAAATATAATTGTGTAATTCATTCAATGAAAACTGATTATTTTGT ACAGTAGAGGACTTTATATAGTGCCTCAATCAGTTACAAGTTTCAACTAATTGAAAACAGAAAGTGTAACTGACTCTAAC TAATCTTGAGATTACTTCTAACTAACTACTAACTGATAGCAAGTGTATGGATCCTTTGAACCAACTGATAGCAAGTTTAT GGATCCTTCCTGAAGCTTATCTCTAATGAAATGAACATCCATTTCAATGTGTTTGGTTCTTTCATGATTAACTGGATTAT TGGCAATCTGTAGAGCAGATTGATTGTCACAGAAGATGCTCACTGGTTGCAAGGAGCTTGGATGCAAATCATTGAGTAGG TAAGTTAACCATAAAGCTTCACAGCTAGATTGTGATAGAGCTCTATACTCAGCCTCACTGGAAGACCTGGAAACTGTGGT TTGTTTCTTACTTCTCCAGGAAATTAATGAGTTGCCTAAGAAGAAACAATAACCAGTGACAGGTCTCCTTGTATCTATGC AAGCACCCCAATCAGAATCACTGTAGCCTTTCAGTGTGATGGAAGAAGTAGAAGGGAAAAAGAGTCCCTTTGCTGGTGCT GCTTTGACATATTTCAGTATCCTTAAGGCTGCTTCATAATGAACATCAGTAGCACAATCTAGGAACTGACTAAGATGATG GACAGCAAATGTTATATCAGCTCTAGTATTGGTTAGATATAGTAATCTACCAATTAATCTTCTGTAACTGCTAACATCTT GTAGTCTCTCCCCAGAACCCTTATGTATTTTAACTGTGGAATCCATAGGGCTGGTTACGGGCTTAGTAGCTGTCAAGCCT GTATCAGCAAGAAGGTCCAATGCATACTTCCTTTGGTACAATCCAATACCTTTCTTGGACCTAGCAACTTCAAGACCAAG GAAATACTTAAGATCACCTAGGTCTTTGATGCTGAACTTGTCATCCAATAAGGTTTTGATAGAATTGATCACAGTTATGT CATTGCCAGTTAACATCAAATCATCGACATAAACCAGGATCACTGTAAATGAAGCATTTTCTCTTTTGGTAAAAAGAGAA TAATCAGCCTTGGATTGAATGTAGCCTTGTTGTATCAATACTTCTGTCAGTTTAGCATTCCATTGCCTACTTGCTTGTCG CAATCCATATAAGGACTTGGTGAGCTTGCAGACCATGCCAGGTTGAGGTAAATCTGATACCATGTGGAAAATATAATTGT GTAATTCATTCAATGAAAACTGAAAGTGTAACTGACTCTAACTAATCTTGAGATTACTTCTAACTAACTACTAACTAAAA CTTCCTCAATAGAATCTGTAGACTGCTGAATCATTTTCACATTACTTTTTATCTCAAATCATGCACATTTTGGATAAGTT ATGTTTAAATCAAAACTACTGATTTATACAGGTGGACTTGATGAGCCAATCCAGCGACCTTACATTGAGCGTGATTGGAG GTTTGGGCATTATGAGATGCATGGTCTCCAGGACTATTTGAGCATCTTCTTTAGATTCCTTATGCGATAGTTGTTATGGT TTGGCTCGCGCCATTGTGGAGAGGCGGGTCGAGCCCGCTTTGCCACTTGTTATTGTGCAGATGATCCATTTTACTTTGTT AGTGATGGTTTTGTTTGATTTCTTATACTTTGGTGGTAGATTGTGATGAAGCCAAGAATAAAATGCAACACGTTGAGTGA TTGTATGTAACATGCTTTCTGCTTCTGAATCTACTTGGTAGTGCATTTTCTGTAATTACCACCTTACATACATTGTGTTT AGTTGCACTTTTTTTTTGCTGACTTAAAAAAACAAAAAAATTGTAATAACCGCATGACATACATCGTGTTTAGTTGCACT TCAGAAATTATTAAAAGCGCTTTCATATTTCAAACATTTTAGGGCTTTGCAAAATGCTTTTTTTTTTTATTGTTGATATC ATTTTTATAAGTGTCTAATGTTTTTTTCTAGGTTAAAATGTCACAATATTTAAAAATATTAGGTTTGCATGGCCTTCCAT TACCTGTCTTCCGTTTTTGTCCTTCAGTAGCTTCCACTATTGTTGTATGGGTAACCATAATGGTAAATTGAGTTGTAACT CAAAGTGGGCTTGGATCTTTCTGGTTGAGGAAAGGAAGTTGGAGCTTTCTGGTGTTAGAGTGGAGTTATGAGATCATCAT CTGGGTTCTTGGACTTTCTGAATCAAACGGTCTGGGGGTTGATCCAGAAAAGATTGACTGACTCATCATGTAAATTGTGT TTTTATGTTCTGGATGTTCATTGATTGGGTGTCTACTTTTAGTATTTTAGTTGAGTTATGGTTATCTGTATCATTTTCTC TTCCTTTTTGATTGGTTTTTTCTCTGTAAATCAAGGAAGCCTCTAATAGAACCTTGAAAGTTGTAAAATAAATGGTTGTT TTCAATTCAAATTCTCGTCTCTTCCTTTTTGACCGTTCTACTCATGAGGTACTTTGTTTCCTTTCGGAATTCAATTTCTC CTTGTTATCCTCTGGCTGCTATAGAATAGAAGCTAGTGTTTT 

CDS sequence (LotjaGi5g1v0226700.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAGTTTTTCCTCACCTCCACCAAGCTTGTGGGAGCTCTGGTCACTCTCGTGACTGTCGTTGTTGCGGTCAAGACCTA CATCTTCTCCTGTTTCCGCCGAAACTACCTCCGCCCCTTCCGCTCCCCGATCGACGAATCCGCCAACATTCTTGCAAAAT TTGACGACGGATTTTTCTTCGGTCTCGCTACAGCACCGGCGCATGTTGAAGATGATCTCGATGATGCTTGGTTGCAGTTT GTACAACAAACGAGTGGGGGTGCTCATAACGTAGCTGCTTGGCACAATGTGCCTAATCCGGAGGAGAGGTTAAAGTTTTG GACTCAGCCTAATAGAGAACTACAGTTGGCCAAGAATACTGGTATTACTGTTTTTCGCATGGGAATAGATTGGTCAAGAA TCATGCCAAAGGAGCCAGAAGGAAACAATCCTCTAGAATCTATTAACTATGCTGCATTGGAGAGTTATAAGTTGATTCTC GAAAATGTTCGATCAGATGGAATGAAGGTGATGCTCACTCTTTTCCATCACTCACTTCCACCTTGGTCTGGTGAGTATGG AGGTTGGAAGGTGGAAAAGACAGTGGATTATTTCATGCTGTTTACCAGGCTTATTGTAACCCATTTATCCAAATGGGTAG ACTATTGGGTAACCTTCAATGAACCCCATGTCTTCTGCATGCTCACCTATTGTGCTGGAGTTTGGCCAGCTGGGGATCAA CCTAGTAGACTAGATGCATTGCCGACGGGCGGTTTTCGAAAAGCTATGCAATGGATTTCTATTGCACATGCAAATGCATA CGATTACATACATGAAACATTAGTAAGTTCAAATCCAATAGTGGGGGTTGCCCATCACGTGGCATTCACGCGACCCTATG GACTGTTTGATGTTAGTTGGGTGTCATTGATGAATTCATGTACGCTCTTCTCATATATTGATGGGATATGCAACAAGCTG GACTTCATCGGAATAAATTACTATGGGCAGGAAGTTGTTTCTGGTTTTGCGCTGAAACTGGTGGAAGATATGGAGTACAG CGAATCTGGCCGTGGGGTATATCCGGATGGTTTATACCGGATGCTCCTACACTTCCACGAGAGATACAAGCATCTTAAAC TCCCCTTCATAATTACTGAAAACGGAGTTTCAGATGAGACAGATTTGATTCGCAGGCCATATCTCGTGGAGCATTTGCTT GCCATCCATGCCGCCATGACCATGGGTGTGCCCGTGCTTGGTTATCTGTTCTGGACTATATCTGATAACTGGGAGTGGGC TGATGGATATGGCCCCAAGTTTGGACTTGTTGCCGTTGACCGGGCAAACTCCCTTCAACGGACTAGACGTCCTTCTTACC ATCTTTTTTCCGAAGTTAATTCTAAATTTTGCAGTCTGCTTTTCTTTCTCCATGATATTGCTTTGTGTAGTTTTAGGAGA CACTTGTTAGAATATAATATAAAACCATTCATATGA 

Protein sequence (LotjaGi5g1v0226700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKFFLTSTKLVGALVTLVTVVVAVKTYIFSCFRRNYLRPFRSPIDESANILAKFDDGFFFGLATAPAHVEDDLDDAWLQF VQQTSGGAHNVAAWHNVPNPEERLKFWTQPNRELQLAKNTGITVFRMGIDWSRIMPKEPEGNNPLESINYAALESYKLIL ENVRSDGMKVMLTLFHHSLPPWSGEYGGWKVEKTVDYFMLFTRLIVTHLSKWVDYWVTFNEPHVFCMLTYCAGVWPAGDQ PSRLDALPTGGFRKAMQWISIAHANAYDYIHETLVSSNPIVGVAHHVAFTRPYGLFDVSWVSLMNSCTLFSYIDGICNKL DFIGINYYGQEVVSGFALKLVEDMEYSESGRGVYPDGLYRMLLHFHERYKHLKLPFIITENGVSDETDLIRRPYLVEHLL AIHAAMTMGVPVLGYLFWTISDNWEWADGYGPKFGLVAVDRANSLQRTRRPSYHLFSEVNSKFCSLLFFLHDIALCSFRR HLLEYNIKPFI 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 23 23 -
PANTHER 1 86 86 1.1E-215
SignalP_GRAM_POSITIVE 1 12 12 -
Phobius 1 9 9 -
PANTHER 1 86 86 1.1E-215
TMHMM 10 32 23 -
Phobius 10 18 9 -
Phobius 19 23 5 -
Phobius 24 491 468 -
Gene3D 44 312 269 5.2E-56
SUPERFAMILY 53 460 408 1.62E-94
Pfam 53 293 241 3.1E-31
PANTHER 99 460 362 1.1E-215
PANTHER 99 460 362 1.1E-215
Gene3D 313 463 151 1.5E-41
Pfam 316 461 146 4.1E-24
PRINTS 319 333 15 4.6E-15
PRINTS 376 384 9 4.6E-15
ProSitePatterns 376 384 9 -
PRINTS 388 399 12 4.6E-15
TMHMM 399 421 23 -
PRINTS 409 426 18 4.6E-15
PRINTS 433 445 13 4.6E-15

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.

Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0226700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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