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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0227100 |
| Transcript ID | LotjaGi5g1v0227100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatase 2C family protein; TAIR: AT5G27930.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q0WRB2|P2C73_ARATH Probable protein phosphatase 2C 73; TrEMBL-Plants: tr|I3T5T4|I3T5T4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0227100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:53440848..53442943) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGGCATTTTTCGTCCGTGTTCAACGGGTTGGCGAAGTCATTTGCAATGAAGAAAGGGAGGAGTTCTGGTAGATGTAG CGGGAGAGAAGCTGCAGAAGCAATGGCAAAGGAAGCCAAAAAGAATCACTCCATACTTAAGAGCTCTGGCACCGTTGATG TTGATGGTTCAAACAACTTTGCATCAGTTTTCTCCAAAAAAGGCCAAAAAGGAGTGAATCAAGATTGCTGCTTAGTGTGG GAAGTAAGTAGAAACATTGTATATTTTCTTTTCTTATCATTGTAGATACTTTATTGATTTATTGTTAGAAAGTATGAAAA CAGAAAAATAACACATACATACTGACGTCGGCTCTAACTGTTCATCTTCCTTACAGGAATTTGGGTGCCAAGAGGACATT ATCTTCTGTGGAGTTTTTGATGGGCATGGGCCATGGGGTCACTATGTTGCTAGAAGAGTGAGGAAATCAATGCCAGCATC TTTGCTATGCAACTGGCAAGAGAAACTTTCCCAAACTTCACTTGATCCAGATGTTGATATAGAGTCACAGAAAAAGCAAT ACAGATTTGATGCATGGAAGCATTCTTACTTGAAGACTTGTGCTGCCATTGATCGAGAACTACAGCAGAATCGCAAGATA GATTCATTTTACAGCGGCACAACAGCCGTATCGATTGTTAGACAGGTAAGAAGAAAATCATAGCATGATTGGATCGGCTT CTCTTTCATCAAACCAATTCTTCTAGCTCCCTAATCAATTGTAGAAGATTTCCAAACATGCACTAATATCTCACTTACCC AATTTGTAAAACATGGTAGTTTTGTATTAGTTGGTAAGTAGTGCATGATGATGCACAATAGATCAACCGATATTACAGAA ATGTTGTTTTGAAAACTTAACTTGATTTGGTGATGGCCAGGGTGAAGTAATTGTGATTGCAAATGTTGGTGACTCTCGTG CTGTATTAGCTACAACATCAGATGATGGAAGTTTGGTACCAGTTCAGCTGACAGTAGATTTCAAGCCCAATTTACCTCGT TAGTCTATTGCTTAGTGTGTTTATCATTTTGTCCATTTCTTGTTTATGGCACCTACAACCACAAGCTACTCATAAAAGTT TTTCCCCATAATTGATTTTAACTTTCGAATCAATTTGGTTGAATGCTGATATTATGTATAATGTTTGCAGAGGAGGCAGA GCGAATACTTGAGCACCAAGGAAGGGTGTTCTGCTTAGATGACGAGCCCGGAGTTCACAGGGTGTGGTTGCCGGATGAAG AGTCCCCAGGACTAGCCATGTCCAGGGCTTTTGGTGACTACTGTGTGAAAGAGTATGGTCTAATTTCAGTGCCTGAAGTA ACACAAAGGAATATAACCAGCAAAGACCAATTTGTTGTGCTGGCCACTGATGGGGTATAAAGTGTTATCCTTCAAACTTT TTGGGTTTTGAAGTTTTAGTTTGTAGTAGTCTCTGTTTAAGAATATAATAGTTGAAAACCATATAAAAGGTGTGACCTTA TACTCATTATCTTAAGGCCTTAGATAAAGATGTGGTGTCTATAGATATCTTTGTGAACTTCTTTATTGGACCATTAGCAT AGGTTCTCTTGTGTCCCTATAAAACATACATATTTTCTGATTTCATTGCAATCAGTAAATTATAGTGGCTGAATGAACAT CTTAAATTTAGACCGTTCGATCTTCATTCGATAGTTTTGATTTGCTGACTACAATGACTTGAACATATTTTGACTAGAGA GCAAGGTGTTGTTGCTTAAACATGTATGTTATGATTGAAATAGTAGTTAATTAGCAATATCAATAGATTTTGGTGCTGAA TTTTAAGTCCATTTAAAGATAGGTGATTGATTTTTGCATGTGGTATAGGTGTGGGATGTGATCTCCAATGAAGAAGCGGT GGATATTGTATCTTCCACAGCAGACAGAACAGACTCAGCAAAACGTTTGGTGAAGTGTGCAATGCGTGCATGGAAGAGAA AGAGGCGGGGTATTGCCATGGATGACATTTCAGCTATTTGTCTCTTCTTTCACTCTTCAACTTCATTTGACCAAGTTGCT TCAGTAAATTAAATAG
CDS sequence (LotjaGi5g1v0227100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGCATTTTTCGTCCGTGTTCAACGGGTTGGCGAAGTCATTTGCAATGAAGAAAGGGAGGAGTTCTGGTAGATGTAG CGGGAGAGAAGCTGCAGAAGCAATGGCAAAGGAAGCCAAAAAGAATCACTCCATACTTAAGAGCTCTGGCACCGTTGATG TTGATGGTTCAAACAACTTTGCATCAGTTTTCTCCAAAAAAGGCCAAAAAGGAGTGAATCAAGATTGCTGCTTAGTGTGG GAAGAATTTGGGTGCCAAGAGGACATTATCTTCTGTGGAGTTTTTGATGGGCATGGGCCATGGGGTCACTATGTTGCTAG AAGAGTGAGGAAATCAATGCCAGCATCTTTGCTATGCAACTGGCAAGAGAAACTTTCCCAAACTTCACTTGATCCAGATG TTGATATAGAGTCACAGAAAAAGCAATACAGATTTGATGCATGGAAGCATTCTTACTTGAAGACTTGTGCTGCCATTGAT CGAGAACTACAGCAGAATCGCAAGATAGATTCATTTTACAGCGGCACAACAGCCGTATCGATTGTTAGACAGGGTGAAGT AATTGTGATTGCAAATGTTGGTGACTCTCGTGCTGTATTAGCTACAACATCAGATGATGGAAGTTTGGTACCAGTTCAGC TGACAGTAGATTTCAAGCCCAATTTACCTCAGGAGGCAGAGCGAATACTTGAGCACCAAGGAAGGGTGTTCTGCTTAGAT GACGAGCCCGGAGTTCACAGGGTGTGGTTGCCGGATGAAGAGTCCCCAGGACTAGCCATGTCCAGGGCTTTTGGTGACTA CTGTGTGAAAGAGTATGGTCTAATTTCAGTGCCTGAAGTAACACAAAGGAATATAACCAGCAAAGACCAATTTGTTGTGC TGGCCACTGATGGGGTGTGGGATGTGATCTCCAATGAAGAAGCGGTGGATATTGTATCTTCCACAGCAGACAGAACAGAC TCAGCAAAACGTTTGGTGAAGTGTGCAATGCGTGCATGGAAGAGAAAGAGGCGGGGTATTGCCATGGATGACATTTCAGC TATTTGTCTCTTCTTTCACTCTTCAACTTCATTTGACCAAGTTGCTTCAGTAAATTAA
Protein sequence (LotjaGi5g1v0227100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGHFSSVFNGLAKSFAMKKGRSSGRCSGREAAEAMAKEAKKNHSILKSSGTVDVDGSNNFASVFSKKGQKGVNQDCCLVW EEFGCQEDIIFCGVFDGHGPWGHYVARRVRKSMPASLLCNWQEKLSQTSLDPDVDIESQKKQYRFDAWKHSYLKTCAAID RELQQNRKIDSFYSGTTAVSIVRQGEVIVIANVGDSRAVLATTSDDGSLVPVQLTVDFKPNLPQEAERILEHQGRVFCLD DEPGVHRVWLPDEESPGLAMSRAFGDYCVKEYGLISVPEVTQRNITSKDQFVVLATDGVWDVISNEEAVDIVSSTADRTD SAKRLVKCAMRAWKRKRRGIAMDDISAICLFFHSSTSFDQVASVN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 17 | 358 | 342 | 2.0E-164 | – | |
| PANTHER | 17 | 358 | 342 | 2.0E-164 | ||
| Gene3D | 46 | 355 | 310 | 3.7E-78 | ||
| SMART | 51 | 350 | 300 | 1.7E-60 | ||
| CDD | 59 | 352 | 294 | 3.59491E-71 | ||
| ProSiteProfiles | 60 | 352 | 293 | 45.934 | ||
| SUPERFAMILY | 60 | 353 | 294 | 7.06E-61 | ||
| Pfam | 83 | 330 | 248 | 3.8E-42 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. |
Expression pattern of LotjaGi5g1v0227100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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