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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0227600 |
| Transcript ID | LotjaGi5g1v0227600.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatase 2C family protein; TAIR: AT1G09160.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|O80492|P2C05_ARATH Probable protein phosphatase 2C 5; TrEMBL-Plants: tr|A0A151U4Z8|A0A151U4Z8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0227600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:53493440..53495731) extracted from Lotus japonicus Gifu genome v1.2.
ATGAGTAGGAGTAGTACTGAATTATCAAGAATGAAGGAACCACTTGTTCCGTTGGCCACCCTGATTGGCCGGGAGCTACG GAGTGAAAAAACTGAAAAGCCATTTGTGAAGTATGGGCAGGCTGGCTTGGCAAAGAAAGGAGAAGATTACTTTCTAATCA AGACAGATTGCCAGAGGATTCCTGGGGATTCGTCAACACTGTTTTCTGTCTTTGCGGTATTATTCGTGTCCATGGTTTAC GTGTGCATTTACTTATTGATTGGCATATAGTATTTGTTTTTTAGCGAAATGTTTCGACAAAGATATTTGAATAGCAATAA ATGAGAATATAGCTTGAGATACGACACCGATGGTAATTGGTTATGCACACCGGGAGAATAACGGTTTCTCAGGTTTTGTG AAAAGGAGAAAACTTATATACAGTTCTGGTGCTGTTGCCCAATGAAATACTGAGTAACCCACTTTTTAATAATTTATTAA TTTTATCTTTTCTCTCAACTTCCTATTTTCAACCCACGTGTCATATTGGGATGGGAAAACAGTAAAAACAATACTGATAG AACTGTATGTAAGTTCTGTCCTTGTGAAAAATGAGAATTGAAGTGCATGATTTCTTTCTTCTCTTGCATTTTCTCAGCTA TCAAGTGGAGTGTCAATTTATTCCTTCGATGGTTATGATATCCATAGGAATTCTTGATGGCAGATCTTTGATGGACATAA TGGCATGTCCGCTGCTATTTTTACGAAGGAAAACATAATCAATAATGTTATGAGTGCACTACCACAAGATCTCAGCAGGG ATGAGTGGCTTCAAGCTTTGCCTCGGGCTCTAGTTGCTGCTTTTGTGAAAACTGACATAGAATTCCAGCAAAAAGGTACA TACAAACTACAAAGTTCTCTTTGCATCCCAACTAGAGTTGTTAATGTGCACTCATGCTAACCTTTCAATTTTAAATGCAG GGGAAAATTCTGGAACGACAGCTACATTTGTTCTAATTGATGGATGGACTGTAACTGTTGCATGTGTTGGGGATTCCCGT TGCATATTAGATACCCAGGGAGGTGTTGTTTCTCTATTGACAGTTGATCACAGATTGGAAGAAAATGTAGAAGAGAGGGA ACGTGTTACTGCCAGTGGTGGTGAAGTAGGAAGACTAAATGTATTTGGAGGCAGTGAGGTAAAATGTAATCTTCATATTC CTTTCAAATCATCGCTTGCTTAACTAACCTGTTTCGGTTCCTTAATACGTTTATAGGTAGGGCCTCTTCGCTGCTGGCCT GGTGGATTGTGCCTTTCAAGATCAATTGGTGACACAGATGTTGGAGAATATATTGTTCCTATACCACATGTTAAGCAAGT GAAGGTCAGCTTGTTTCATTCTTATGGACTTAGTTTTTTTTACCTTTTCATGTGCTGGTGTTGAGTTCTAAATTTCAATG CTTACAATTTCTTAATTGGTTCCCCAGCTGTCAAATGCAGGTGGAAGGCTTATTATAGCTTCGGATGGTATTTGGGATGC TTTATCCTCTGATATGGCCGCCAAGTCATGTCGGGGTGTACCTGCAGAACTTGCTGCAAAACTGGTGGTTAAGGTGATAG TTGGGGCAATCTTCCTATCTTATTAGGAAACAAAGACCCATTATCTTGTCTACTCAATACTCAGTACATTTTTTTATCCC CTGACAGGAAGCTCTAAGGACAAGAGGGCTGAAGGATGATACAACCTGCCTTGTTGTAGATATTATTCCTTCAGACCATC CTGTGTTACCACCAACTCCAAGAAAGAAACCTAATATGCTAACTTCCCTTCTTTTTGGAAAGAAATCTCAAAACTCCACG AACAAAGGAACCAATAAGCTTTCTGCAGTTGGTATTGTGGAGGAGTTATTTGAAGAGGGTTCTGCAATGCTTACTGAGAG GTCACTCCGAGACTATTACTACTAAATTTGTATCACACGTGTTGTTTTGATGTTGCTTTTCTTCATCTCCAATAAGTTAC TGGATAAAAAAATTCTTTCCCATTTGGGAGTATTTGTGTGCGGTAGTCTTAAATTTTCTGTTTTCTTCTAATGCAGGCTG GGAAAGGATGCTCCTTCTAATGTGAATTCTGGGATTTCCCGCTGTGCGGTTTGCCAAGCAGATCAAATCCCTAGTGATGG TTTATCAGTGAACAGTGAGCCTATTTTCACTCCGGTATCTAAGCCATTGGAAGGACCATTCCTCTGCACAAACTGTCAGA AGAAGAAAGATGCCATGGAAGGAAAAAGGTCTATCTAGAATGCCCACAGTGA
CDS sequence (LotjaGi5g1v0227600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTAGGAGTAGTACTGAATTATCAAGAATGAAGGAACCACTTGTTCCGTTGGCCACCCTGATTGGCCGGGAGCTACG GAGTGAAAAAACTGAAAAGCCATTTGTGAAGTATGGGCAGGCTGGCTTGGCAAAGAAAGGAGAAGATTACTTTCTAATCA AGACAGATTGCCAGAGGATTCCTGGGGATTCGTCAACACTGTTTTCTGTCTTTGCGATCTTTGATGGACATAATGGCATG TCCGCTGCTATTTTTACGAAGGAAAACATAATCAATAATGTTATGAGTGCACTACCACAAGATCTCAGCAGGGATGAGTG GCTTCAAGCTTTGCCTCGGGCTCTAGTTGCTGCTTTTGTGAAAACTGACATAGAATTCCAGCAAAAAGGGGAAAATTCTG GAACGACAGCTACATTTGTTCTAATTGATGGATGGACTGTAACTGTTGCATGTGTTGGGGATTCCCGTTGCATATTAGAT ACCCAGGGAGGTGTTGTTTCTCTATTGACAGTTGATCACAGATTGGAAGAAAATGTAGAAGAGAGGGAACGTGTTACTGC CAGTGGTGGTGAAGTAGGAAGACTAAATGTATTTGGAGGCAGTGAGGTAGGGCCTCTTCGCTGCTGGCCTGGTGGATTGT GCCTTTCAAGATCAATTGGTGACACAGATGTTGGAGAATATATTGTTCCTATACCACATGTTAAGCAAGTGAAGCTGTCA AATGCAGGTGGAAGGCTTATTATAGCTTCGGATGGTATTTGGGATGCTTTATCCTCTGATATGGCCGCCAAGTCATGTCG GGGTGTACCTGCAGAACTTGCTGCAAAACTGGTGGTTAAGGAAGCTCTAAGGACAAGAGGGCTGAAGGATGATACAACCT GCCTTGTTGTAGATATTATTCCTTCAGACCATCCTGTGTTACCACCAACTCCAAGAAAGAAACCTAATATGCTAACTTCC CTTCTTTTTGGAAAGAAATCTCAAAACTCCACGAACAAAGGAACCAATAAGCTTTCTGCAGTTGGTATTGTGGAGGAGTT ATTTGAAGAGGGTTCTGCAATGCTTACTGAGAGGCTGGGAAAGGATGCTCCTTCTAATGTGAATTCTGGGATTTCCCGCT GTGCGGTTTGCCAAGCAGATCAAATCCCTAGTGATGGTTTATCAGTGAACAGTGAGCCTATTTTCACTCCGGTATCTAAG CCATTGGAAGGACCATTCCTCTGCACAAACTGTCAGAAGAAGAAAGATGCCATGGAAGGAAAAAGGTCTATCTAG
Protein sequence (LotjaGi5g1v0227600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSRSSTELSRMKEPLVPLATLIGRELRSEKTEKPFVKYGQAGLAKKGEDYFLIKTDCQRIPGDSSTLFSVFAIFDGHNGM SAAIFTKENIINNVMSALPQDLSRDEWLQALPRALVAAFVKTDIEFQQKGENSGTTATFVLIDGWTVTVACVGDSRCILD TQGGVVSLLTVDHRLEENVEERERVTASGGEVGRLNVFGGSEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLS NAGGRLIIASDGIWDALSSDMAAKSCRGVPAELAAKLVVKEALRTRGLKDDTTCLVVDIIPSDHPVLPPTPRKKPNMLTS LLFGKKSQNSTNKGTNKLSAVGIVEELFEEGSAMLTERLGKDAPSNVNSGISRCAVCQADQIPSDGLSVNSEPIFTPVSK PLEGPFLCTNCQKKKDAMEGKRSI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 376 | 376 | 2.2E-167 | – | |
| PANTHER | 1 | 376 | 376 | 2.2E-167 | ||
| SMART | 25 | 297 | 273 | 1.2E-59 | ||
| ProSiteProfiles | 27 | 299 | 273 | 36.47 | ||
| Gene3D | 30 | 303 | 274 | 2.4E-57 | ||
| SUPERFAMILY | 39 | 299 | 261 | 1.44E-52 | ||
| CDD | 45 | 299 | 255 | 1.07502E-55 | ||
| SMART | 52 | 299 | 248 | 0.0013 | ||
| Pfam | 65 | 282 | 218 | 1.1E-33 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. |
Expression pattern of LotjaGi5g1v0227600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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