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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0228200 |
| Transcript ID | LotjaGi5g1v0228200.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dehydration-induced 19-like protein; TAIR: AT3G05700.1 Drought-responsive family protein; Swiss-Prot: sp|Q84J70|DI193_ARATH Protein DEHYDRATION-INDUCED 19 homolog 3; TrEMBL-Plants: tr|I3T2U3|I3T2U3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0228200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:53541254..53545132) extracted from Lotus japonicus Gifu genome v1.2.
TGTAAAGTGGTGCCATATTTTAGCTCATTGCTTGCTGGAAGTGGTTTGGACGTTTCTTACAGTTGACGTGTGAAGTCATG GAAATGGAAAATAAAAATAAAATCTAAAATGAAAAATGCAAAAAATATATATAAATAAAGAAAAAAAGACAATAATTTAG TTTTATTTACCTTTGGTGGTGAAATTCCTCATCTCATCTCATCATCTCATCGCAGCATCTTCTTCCTCTGCTCCTCTCTC TCTCTCTCTCTTTCTCAGTCGCTCCTCACTTCCTCACCAAACCAAAACCCTAATTCGCCAAATCAGAATCCATGGACGCT GATTCCTCTTGGACTGCTCGTCTCTCTTCTGCCTCCAGGCGCTATCAATCCGCTCTCCAATCTCGATCAGGTTCATTCAC CTCTCAATTCAATCCAAATCAAATTCCCCTTTTTTTTTCCTTCCCCTTCTTCAATTTCTTGCTTAATTCGTTGTAAGAAC AAGGTTCCTTTGATAAAAACTAAAAATTGATTCAAAAGCTGTAATAAAAAACTTAGCTTCAGATACACTAGCACTGTTAG AACTCACACGCAAGTGGGTCTTTATGGCTTTGATTCACATCTACGAAAAATTAAATAAAAATTAAGACTTGATGGGAAAA AATTGATTTTTCATTTTTCTCTCTGTCACTTGGTAGTTTTATGCTTGATTTTTTTTTTCATTTTCGGTTGTTTGATGTGT TTGAAATGGGAGTTATGTGAAATCAGAGGCATGATTTCTCTAAAAAGCATAATCCAAACTGCTATCTGGTGTGGTGTTTT ATTTTCTGCTGAACATGGTAGTTGTGATAGCAATGACAATTGGGATTTGTGATGTATGGGTCTTGGTTAGCCAGACTAAA TTGTATGGCTTTACTGGTGTGCTTGTTTATGTTTGAGTATTTAGTATTGATGTCTCCTCTTGTATTTACTGATATGGGAT TGTGTGAGTGTAGATATGTTCATGGGTTTTGATGAAAATGATGTGGACGATGACGTAAGGGAGGAGTTTCTATGCCCCTT TTGTTCGGAGTATTTTGATATCGTTGGATTGTGCTGCCACATTGATGAAGAGCATCCAATGGAGGCGAAGAATGGGGTAT GGCTTCTTTCATTTGCCTTTCAACAGTTTTTCCAAGCAACTTTCAAGTTTTGCTGTCTGATAGATGTTCAATTTGTGCTT AGCCTTTAAAAGCTTTTGTTCATTCCTACATATCTTTCACCCTCTACTTCTTATAAGTGAACTGAATATGATATTTTGAT GTTTAAGCTGGAAAAAAGTGATATATTTTATCAGAGGAATCAATATTTTTTCTGATTATACCATCTCTTTGTGCAGGTAT GTCCAGTTTGTGCATCGAGGGTGGGGGTTGATATGGTAGCGCACATTACCCTACAACATGGAAATATATTTAAGATATCC TTTTTCTTTTGTTAAATTTGGTTTTATGAATTCTCGTATGGTTGGTTCTTACTTCTTAGCACAAAACTTTGCGGTTAATT GCCGGGTTCTTTGACAAATTTTATTACAGAATGAATAATGTTGCCAAAAGTATACCTTATTCTAAAGTTTTAGTTTTTTA TAAATAAAAAAAAATACCCTATTACTTGGTTGAATTCCTTAACTAGGGAATACATGCAGCGCAAAAGGAAATCACGTAAA GGTGGGTCTTATTCAACGCTATCATTATTGAGGAAGGAACTGCGAGAAGGAAATTTGCAATCCCTTTTTGGTGGGTCTTC GTGTATAGTGTCCTCATCTAATTCTGCAGCTGATCCACTGTTGTCGTCGTTTATATCGCCTTTAGCTAATGAACCTACCA GTTCTCAGCCTCATTTGCACACTGAGACAAGATCAACCAAGAAAAGCTTGGATGAGACTGTATCAAAAAGGTATTTCTGT TTCATTTTTAATCTTTGAAAGGAATGCCACACCCTCTTCACAGAATCCTGTTCTATATTATGCAATTATTCCTGAATGAG TTGATGATGCTATCCTCTTCCCATTTACTGTTATTCATGCAATAACACAATAGTTAGTTTATACATGTATCAAATGTTTT AATAAATTATTTTGTACAATTCTTAATTTCTAATTTTACAAATTCTGATAAGATTGTGTTCACTGTAATGATTTTCCTCC TCCATGTCCTCTCTCACAATCACTAGACACACACACATGATGAGAAGCGAATGGCTTGTTTGGTTTTTGTTTTCATGTTC AGTTTTCATTTGTTTTCAATTTTAATTACAAAAAAGGCCACTTTATTTTCATTGTACTTATTATTTTCAAATATTTGTAT GGGAAACAGTGAAAACAATAAAAAGTTATCATCCCTGTTTCTTTTACATAATTTTGAGAACAGGGAACAAATTTAGAACA AGGTAGAACTTTTTATAGCTTCCGGCCTATTCAATAAATATTCTATTTGTCCTCTATAAGGGGAATTCAGTAATATGAGT TGTTCACAACCTGTCCCATTCCATTGACCCAACCCATCCTGAACTATTCAGGTTGCATCTGAGCCTGCCCACCTAGCACA AGAAATATTAGTGTCAGCATGGGTCGCATTTGGTAACCTGGCATGAGTTTGGGATACTTGGAATGAATATAGGTCAACCT TTGGGTGTTATTTGAAATTATTTATTACTTAAAGATTCAACCTTAGTATATTCTTTTAATTAGTTAAGTTCAATATTTTC CCATTTACTTCTAAAACACATTCTATGTGTAAATTCATAGTGATATATTGTGGTTATTCTCTTAGTAATCTCCTGAAACT AAAGGAAGTGAAAAAATGCAGGCATACATTGAGAAGAGTTATAATGTATATGATATATGGCGTTTTAAATCATTGGTATA TAAACATTTCATGATTTTGCTTAGTTTATTCCTCTGGTCAACCCAATCCCATCCCACTTATACTCAATCTTAACTAAACC CAATCGTCGAGTTTCTTTGGGTTGATGATTGGTCAAAAGAATTGGCACAGTCTAAAATTAGGATTTGGTAATGGACAAAT GAAAACTCCTAGCTCCCACCATGGCAGGGTCCAAGGAAGGGCTGGATCTGATGTTGGTTTACTATTGTAGTTTGTAGGCA ATCTCATCTTGCATTTGCAAGAGGCTGAATTTAAGAGTCGAATCTAATAACCTCTTGGCCACATGTCACTAACTTAAGCG TCACGTCTAGGCTCCCCTTCATTCTATTTGGTTTCTATAACTATGTATCTTTTAATAATGTGATCACGTATGTTTTTGTA ACCTTCTTGACCAATAAATTTAGTGTCTTGTTGCAAAACTGTTATTCCTTGCTTAACAATAATACGCAAAAGTTGCACCA GTTCAATTTTAACCTATTATCTCCTTGTTTCTAACAAAGTCAACATTTCTGTTCAGGAATGTGGAGACACCAACCTTGTC AGACAAAGATAAGGAGGAGAATGCAAAAAGATGTGAGTTTGTTCAAGGTATGTTGCTGTCCACCATGTTGGATGACGACT TATGAAGGAAATTTGTCAAGATGGCTGCTTCAGTGGCTGGCTAATTCACAGATGCGAAACCTGCAACCTATGGTTTGTCT ATGTATTGTATCAGAGTGTAATAATAACGGGTAGAAAATGAATGTAATTTAAACTGCATGTGAACTGATGATGTTTTTAG CCCAAGAGTTTTATATATCCTTTAATTTCAGATCATAAAGCTTAAAAGAAAAGTAGATAAAGTTCCTTTCCTATTGCAAC CGAGTTTTCTTAGAGCCCCCCTCTTCTTTCTCTCTCATATGGTGATTTCTCATAGTTATAGGAAGTAACAGGGTACCTCA GCTTCGCTTATGCTGCATGTAAATGTGTACATAATGCGC
CDS sequence (LotjaGi5g1v0228200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGCTGATTCCTCTTGGACTGCTCGTCTCTCTTCTGCCTCCAGGCGCTATCAATCCGCTCTCCAATCTCGATCAGA TATGTTCATGGGTTTTGATGAAAATGATGTGGACGATGACGTAAGGGAGGAGTTTCTATGCCCCTTTTGTTCGGAGTATT TTGATATCGTTGGATTGTGCTGCCACATTGATGAAGAGCATCCAATGGAGGCGAAGAATGGGGTATGTCCAGTTTGTGCA TCGAGGGTGGGGGTTGATATGGTAGCGCACATTACCCTACAACATGGAAATATATTTAAGATGCAGCGCAAAAGGAAATC ACGTAAAGGTGGGTCTTATTCAACGCTATCATTATTGAGGAAGGAACTGCGAGAAGGAAATTTGCAATCCCTTTTTGGTG GGTCTTCGTGTATAGTGTCCTCATCTAATTCTGCAGCTGATCCACTGTTGTCGTCGTTTATATCGCCTTTAGCTAATGAA CCTACCAGTTCTCAGCCTCATTTGCACACTGAGACAAGATCAACCAAGAAAAGCTTGGATGAGACTGTATCAAAAAGGAA TGTGGAGACACCAACCTTGTCAGACAAAGATAAGGAGGAGAATGCAAAAAGATGTGAGTTTGTTCAAGGTATGTTGCTGT CCACCATGTTGGATGACGACTTATGA
Protein sequence (LotjaGi5g1v0228200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDADSSWTARLSSASRRYQSALQSRSDMFMGFDENDVDDDVREEFLCPFCSEYFDIVGLCCHIDEEHPMEAKNGVCPVCA SRVGVDMVAHITLQHGNIFKMQRKRKSRKGGSYSTLSLLRKELREGNLQSLFGGSSCIVSSSNSAADPLLSSFISPLANE PTSSQPHLHTETRSTKKSLDETVSKRNVETPTLSDKDKEENAKRCEFVQGMLLSTMLDDDL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 220 | 220 | 3.5E-105 | – | |
| PANTHER | 1 | 220 | 220 | 3.5E-105 | ||
| Pfam | 44 | 96 | 53 | 1.6E-21 | ||
| Pfam | 116 | 216 | 101 | 4.7E-35 | ||
| MobiDBLite | 157 | 201 | 45 | - | – | |
| MobiDBLite | 170 | 201 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0228200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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