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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0229300 |
| Transcript ID | LotjaGi5g1v0229300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NAD(P)H dehydrogenase (Quinone); TAIR: AT4G27270.1 Quinone reductase family protein; Swiss-Prot: sp|Q9LSQ5|FQR1_ARATH NAD(P)H dehydrogenase (quinone) FQR1; TrEMBL-Plants: tr|A0A072TQ77|A0A072TQ77_MEDTR Quinone oxidoreductase; Found in the gene: LotjaGi5g1v0229300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:53646858..53649621) extracted from Lotus japonicus Gifu genome v1.2.
GCTTAATTGTGCAATGGAAGTAGAGTGAGGAGAGATGGGAAATCAGAAACAGAAGTGGACACTGCCAAGTCCCTGCGATG AACTCCCATCCATTAAACTGCCAAATAACTAACTATCTAACGGCTAACTGACAAGCTTACTGAACTAACCGCCTTACAAA TTGATAGTCACGCAATTGGTGTGTGGCACTGAATTCAAACTATAAATACACGTTTTGCTTCCCGCTATTTTCACAATCAC CAACCGTCAACAATTCAGCAGAGAAAGAAAGAAAGAATGCAAACAACAGCAGAGAGCAGCAGGAAGAGGCCGAGAGAAGA TGGAGGATCATCGTCAATGGCTGCGGAAGGTCAAGAAGTTTCATCATCTTCAGCGTCTGTGGACGAAGCCGCATCATCAT CATCTTCATGTCCTGCTGCTGCGAAAGAAGCATCATCATCATCATCTTCATGTCCTGCTGCTGCGCAAGAAGGACCATCA AATCCTGTGAGAGTTTTCATAGTGTATGTATTCAATTTTTTCCTTTGTTTCTTTCTGATTTGTTCATCTGCTGCTGCGTA ATCTCATGCTTACATTGTGTTTGTTGTTAGGTCAGTTTCGTTTTTCTTAGATATCGCGCATTCTTGTTTCTTCTTGTTAT ACATTGATTATGATTATTAGGTTTTCTAGAACATTGATTATTGCTCAAGACCTCACGATTGATGAGGAATTCAAGTTCAA ATACTGATTAGGTGTCAATTTTTCATTCTTGAGCTTGGTTCTGTCATCTTTATTTCACCGATGGAGATTTTTCGATTTCT TTGGCAGGTTTTACCCGATGCATGGTCAAGTGGAGAGACTAGCAAGGAGAATACTCGACGGGGTTCATTCTGTACAAGGT GTTGAGGCAAAACTATGGGCGGTATGCGTTTGTGTTTCACTTATTATGACAGTTCCTAGTCCTATGCATTTCTACATCTT TTGCATACTTAATGCCAAAATGGAAAATGTTGTCAAAATGGTCAGAGAGATTAGATACATGTAAAGTAGTAGAAAATTAC ATCACAAGTAGGAGCAATCCTTGTAGATCACATCTTGTTAATTAGTTCCCCTGCCATATGTAGATCTCAATTCATAGAAT AGTTCAGTTGTAGAATTTGAACCAGTCCTAAAGAACCAAGGCAACAATCCTTGTTCGTTTTTTAACATATTTGTTTGACA ATTTGGACTAGATTTGGATGCTTTACATTTCTAACTATTTGTGTTTTCTTTAAGTTTCCTACAATTTAATTGAGTACTCC TTTTAGTTGCTAGCTCAGTCTTTCTTTTGGGAGAGTAGTATGGAAAGGAAAGGACAATAGCCTATGGATCCCAATGAACT CAACAAAACAAAAAACTAGAACAACATATCATCCAACTTAGCCAACCCACTATACTAGCCTCAGATTATAATTTCTCTGC TATGATCCTATTATCAATCTTTTTAAAATTGTTAATGAGGCTTTAGTTTAATGGTTTATGGTCTGTTCAACTGATGCCTG TACTCTGTTCTTTCAAATCCACCAATACTGGGTGTTCCGTGTTTCCAATGCCATTGTTCTTCTAATAGGTTCATGTGGTT AGTTTTGTTATACATTGTAGTCTCTGTGGATAATTACTTCTCAAATTCATCTTTCTTGCTAAGTTTTAGTAAACAATTTT TTGACTTTACTGTGGCTATGAGCAGGTACCTGAGCCACTGGCAGCTGAGCTAAGAGCACCAACCGAGAGTGATGTATCAA CCATCACCGCAGACGAATTCCTGAAGGCTGATTGTGTACTCTTTGGCTTCCCAGCAAGGTTTGGAATGATGGCTTCTCAG TTCAAAGCCTTTCTAGAAACTACTGAACTTATTGCGAAAGAAACCTATCTTGCAACCAAGCCTGCTGGCATCTTCTACAG CAGCAATACCCCAGGCAGTGGCCAAGAGACTGCAGCGTAAGAACACGGATCAAAATCCTCTCATGTAGAAACTTCACATG ACAAGTTCAAGTTCAAATTTTGTGTCTGTTATTGTGATTCCTTCAATTCATTTAGTTTCTTATTTAAATGACATATTATT AGTACCATAACGTCAACATGTCTATGACAGGCTCACTGCTGTAACTCAGCTGGCTCATCTTGGAATGATATTGGTTCCGA TTGGATATCCATCGGATATGAACGTGTTTCAGCCACAGGGAGGACACCTCATGGAAGTGAAAGGTGGAAGTCCATATGGT ACAGGAACTTATACTGGTGTTGATGGTTCTAAACAGCCAACTCCGCGTGAATTGGATTCAGCATTCCGTCAAGGAAGAAA TACTGCCAAGATCGCAAAGCAGCTCAAGGATTGTGGCTTTTCTCAGAGAGTATGTTGAGTTATATTTTTCACTGCATACA AGCTTTTACTTTTAGTTATTTTAGAAGCAAATACTTGTCTTAACCTCTATTTTTGTGTTGCAGTGTATGGAAGATATCTG GTGATTGATATTTGCTTTACAAGTTTCTTGGTGTTTCTCTCTCATATATTAGGCCAAGAAATACTTGTTACTGGTCCCCT TTCACGAATGTAATGATGGCAGATTGAAAGATTAATCTGCAAGTAAACTTCTAATTTCTTGTTACAATACTGTTAGTAGA TTAGTTTGTTAGCATATTGTTAGAAACTGTAGCATTTAGTTACTGAATTAGTTAGTTCAGTAAGTATGAACACTTGTGTG TAAAGAGATGCTATAGTTTGTTATCAGTTTCTTAATTCAAGAAG
CDS sequence (LotjaGi5g1v0229300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAAACAACAGCAGAGAGCAGCAGGAAGAGGCCGAGAGAAGATGGAGGATCATCGTCAATGGCTGCGGAAGGTCAAGA AGTTTCATCATCTTCAGCGTCTGTGGACGAAGCCGCATCATCATCATCTTCATGTCCTGCTGCTGCGAAAGAAGCATCAT CATCATCATCTTCATGTCCTGCTGCTGCGCAAGAAGGACCATCAAATCCTGTGAGAGTTTTCATAGTGTTTTACCCGATG CATGGTCAAGTGGAGAGACTAGCAAGGAGAATACTCGACGGGGTTCATTCTGTACAAGGTGTTGAGGCAAAACTATGGGC GGTACCTGAGCCACTGGCAGCTGAGCTAAGAGCACCAACCGAGAGTGATGTATCAACCATCACCGCAGACGAATTCCTGA AGGCTGATTGTGTACTCTTTGGCTTCCCAGCAAGGTTTGGAATGATGGCTTCTCAGTTCAAAGCCTTTCTAGAAACTACT GAACTTATTGCGAAAGAAACCTATCTTGCAACCAAGCCTGCTGGCATCTTCTACAGCAGCAATACCCCAGGCAGTGGCCA AGAGACTGCAGCGCTCACTGCTGTAACTCAGCTGGCTCATCTTGGAATGATATTGGTTCCGATTGGATATCCATCGGATA TGAACGTGTTTCAGCCACAGGGAGGACACCTCATGGAAGTGAAAGGTGGAAGTCCATATGGTACAGGAACTTATACTGGT GTTGATGGTTCTAAACAGCCAACTCCGCGTGAATTGGATTCAGCATTCCGTCAAGGAAGAAATACTGCCAAGATCGCAAA GCAGCTCAAGGATTGTGGCTTTTCTCAGAGAGTATGTTGA
Protein sequence (LotjaGi5g1v0229300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQTTAESSRKRPREDGGSSSMAAEGQEVSSSSASVDEAASSSSSCPAAAKEASSSSSSCPAAAQEGPSNPVRVFIVFYPM HGQVERLARRILDGVHSVQGVEAKLWAVPEPLAAELRAPTESDVSTITADEFLKADCVLFGFPARFGMMASQFKAFLETT ELIAKETYLATKPAGIFYSSNTPGSGQETAALTAVTQLAHLGMILVPIGYPSDMNVFQPQGGHLMEVKGGSPYGTGTYTG VDGSKQPTPRELDSAFRQGRNTAKIAKQLKDCGFSQRVC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 66 | 66 | - | – | |
| MobiDBLite | 22 | 64 | 43 | - | – | |
| Gene3D | 68 | 274 | 207 | 1.3E-52 | ||
| TIGRFAM | 71 | 269 | 199 | 6.1E-44 | ||
| PANTHER | 72 | 271 | 200 | 1.5E-68 | – | |
| PANTHER | 72 | 271 | 200 | 1.5E-68 | – | |
| SUPERFAMILY | 72 | 270 | 199 | 4.98E-39 | ||
| ProSiteProfiles | 73 | 263 | 191 | 15.049 | ||
| Pfam | 129 | 208 | 80 | 7.7E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | NAD(P)H dehydrogenase (quinone) activity | Catalysis of the reaction: NAD(P)H + H+ + a quinone = NAD(P)+ + a hydroquinone. | ||
| Molecular function | FMN binding | Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. |
Expression pattern of LotjaGi5g1v0229300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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