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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0232800 |
| Transcript ID | LotjaGi5g1v0232800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pyrrolidone-carboxylate peptidase; TAIR: AT1G56700.1 Peptidase C15, pyroglutamyl peptidase I-like protein; Swiss-Prot: sp|O73944|PCP_PYRFU Pyrrolidone-carboxylate peptidase; TrEMBL-Plants: tr|I3SB13|I3SB13_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0232800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:54031311..54035751) extracted from Lotus japonicus Gifu genome v1.2.
CTCGACCTTGCAAGGAATTGAGATCACTGTCAAATCATATGTGAAACAGATTGCAAGGACCTTATTGATGTTCTTGAGCA CGTGGAGGATGTGAAACTTCATGCGAAGGCTCTAGTGTTGCGGCAAATTTTGGAACTGTTGCCCGGAGTTGGAGGGTGAA TGTAACTTGGATTCCTCGAGAGGGTAATAATGCGGATGATTGACTTGTTAGGAAAGGAGCTCGTAGCCCACCAACAACCA TTGCATTGTTTTTTGAAAGTGACTTGCTGCACAGTCGCACGTATGACGTAACTCTCTCCTCTATTATTTTTGGTATTTCT TCTTCTATTAATTATTTATATTTATATTTATATATAATATTGTTGCGTTCTCTTCCTCTTTTCTTTTGTCTAAATCTAAT CGGAATCTTCACCAGTTAATCAACTTTGAGTAGATAAAGACTGGAGGATGCGTTATCTCTTTGATTGAAGCTTCAAGATT GATTGTATTATTCCCGGTAAGGAAAGGAAACTCTCTCTCTCTCTCAATTCTCCAAACAAACACATGCTTAATCTTAATTA TCATGTTTTTTGATTCGATGTAATATTCCTGGGTATTTCATGAGTTCATGATCATTTCATTGTGATCGATCATGTTTTGG TTTAAGGTTGCTTTTTGTTTCTGGGTATACTATAATTCAACCTTAAACCCATGTGTTCTGTACTTCTGTTCTGTCTCCTC GTACACCACGAATTCTCTCTCTCTCTCTGAAACGTGTGGAAAAATCAAATTATCTTCCTTTTTGTCACTCTTGAAAATGG GTTCTCTTCAATTGTTATCGAAACCTTAGATTTGCTTGCAAAATTATATCTTGATGTAATTTCTTTTGTATATAGGAAAA CGGTTCAATTTATCATTTTTGTGCCCTGTTTACTCAAATTGGCTCATAATTTGATGCAGGTATTGTATTTAGAGAGACTC TAAAATAATTCAGACCGTCATCGGCAGATGGGGTCTGAAGGTCCTGCAGCAGCTGCTGTAACAACAGTTCATGTAACAGG TTTCAAGAAATTCCATGGAGTTTCGGAGAATCCGACGGAGGCGATCGTCCGCAATTTGACGGAGTATATGAACAAGAAGG GTTTGCCTAAAGGTTTAGTAATTGGGAGCTGCACCATTCTTGAGACTGCTGGTCAGGGAGCACTTGTTCCCTTGTACCAG ACATTGCAATCTGCCATTACTGCTGCCAAGGAATCTGAATCTTCAAGTTCTAACAGAGTTATCTGGGTGAGTTTCTCATA TACTTGATGTGTCGGCTGGATCGGAGTTCATGCTCTTTTTTAATGATTCCTTGAGTTCTCATTCATGGAATCAGATCAAG TTTACGCCTCTCCATGAATTTTATTATTTAAGGGAATCAGATCAAATTCTCATTCATAGAATCATATATACTAGTCACAA CTAATCAAAAACCAAAGATAACTTCAAAATAGTCCCCTTGAAAGCTATTGTGTAACTAAAACTGCCTTAATCTTTTAAGG TAGTCTGAACTGAACTGAAATTTCTTTAAAAGGGTTAGTCTAGAACTACATTGAAACCTCTTAGGAACTTTCTTTCTTAG TACCTAAACCGTAACGCTATGGCTGAACTAAAACGGATAACATATAATGGTGAACAATATTAAGATCGTGTAATTGGGAT AAGAACCCTTAGGGAGAATGGTGAAGAGGTAACCAGCTGATTAAAATAAGCAGCATTTGATTATATTTTTGTTTCTACAT TCATGAATCTTCAGTTCTGGCTACTTCTGAGTTCTGATCATGTTTTTTTCAGCTGCATTTTGGGGTTAACAGTGGTGCAA CAAAGTTTGCTATAGAGCGTCAAGCTGTCAACGAGGCCACCTTCCGTTGCCCTGATGAAATGGGATGGAAGCCTCAGGTC AGATTAGAATAGTGGATGCATTCTAAATATGCTTACTCTATTGTTCCTTTAGTGAAATTTCAAAAATTTGTATGTTGCAG AAAGTCCCCATTGTCCCTTCAGATGGTGCTATTTCGCGAACACGGGAGGTAAATTGGATCACTGATTCTTCTCACACTTA CTTTCCTTAAATTGTATTCTTGATCTTGATTCTGCGGTTAGGATCCCCATAATCATTTCAGGGGAGAAACTACAAAGTGT AGCTTGTGGGGTTACCTTGCTTTGGATTGTGTGTCCACTGCCAATTCAAACACGCTCCTGTGTAGTGATGTTGAAATTTG CTTTTCATATAGAATAGTATTTATTTTGTATCCTCCTTGCAAGAATTTAAAGGGGCAACATACTATTCTAAGTATCATTT AGCAGGTTTTTCAATTGTCTTTTGGACCCATGCACTAAACTTTATGCTCTTCATTTGTCAAAACTTAAAACTAATGAGTT ATGAAGGAATTTTTTGTTATCAGTATGTGCCTCTTGATGGAGGCATATGTAGGCACAAAGTTATTGGTGCACATATATAC AACATGAAACCTTCTAAGAAAACTCACGAGTTAATTGCCTATATGAGTTTACGATCCTAGGTTACAAAGTGAAGTTACAT CGTATGTAAACTCGTTTTCTGATAAACTCGGATAAACTCGCAAATTCACTACCGAGTTCAACAGTTCAGCAAGAAAGGGA GAAAATTTTCTTTTTGCAAAAATGATGCCATTTCATGATACAATCTTTGCAGTATTACTTTATTCTTTGCAAACCCCTCT CATCCACGTCCTCTTCCTCTTTTCCTCTAATATTTATTTGTCTATTGTGCACAAGAACCAGTTGCTGCAATAATACTAAA ATTGTGTACGAATCCCTTGACTCCGAATCTTTTTGTTATATGAAGTCTTCTTGGTTTAAAATTATGAATTGATAATCGGA GACCTAAAATATAGCTAGATTTTAACTTGTTATATAACTTCCATTGTATGATTTGTCTATTTAAGCGTATTTTTACTTTA ATTGTGTTTTTAATCATTATTGTGTTTTTTAAATATTCTTTTTGGATGAGATAAACTCTTATGAGTTTACGAGTCCAGTT TACAAGTTTACAGGCTTACGTAAATCTCGAGTTTGACAACCTGGATTGCTGTATAACAACTCTTCCCTGTTTCATCTGTC ATTTGATTATGCAGACTACCCTTCCTGTGGAGGAGATTACCAAGGCCTTGGCAAAGAAGGGTTATAATGTGATGACATCT GACGATGCCGGCAGGTTTGTGTGCAATTATGTTTACTATCATTCTCTTCGATTTGCAGAGCAGAACGGGATCAAATCTCT CTTTGTGCACGTGCCGCTCTTCTTCACAATAGATGAAGAAGTCCAAATGCAATTTGCTGCTTCCTTGTTAGATCTACTTC CTTCAATATGTTAGTAACATCCGGCTCCTGTAATTGTTCTGGTGTTGCAATGCATATGAAAGTGGATGAGTGTTCCTTTA ATGAAATGTTATAAATTATTGTGATAATAAGATATTGTCATGAAATGGAAACGGTTGATTGAAAATGGCATGTGTGGCTG AGCCATGAGCATTTGCTTGGGCTGGCAAATGATCCTGATTAAAGGCTTCAGCAAAATGTTGACACAAATTGACATCTTCA ATGTTACAGTGTGAATAATGTTCATTTTTCTTTTCCTTAGTACTGCCCTTGTTATTTCTGCAACTTGCTTATTGTATCCA ATAAGCATGTCACAAAGGTTCCTCCCGTTAGATGCTTAGATTTCATTTGTTTCTCGGTTACGAGTGGCATAAACTGCAGT TCAGAAAACTCGACAAGAGACATGAGTTTCGGTTGTTAACCTGCCTCGGAAAGATGAAAATGAGGTGTGCAACGGGCTCT TAATAGATTGATGAATTACCTGTTTGAATTGATGGTGGAATACAATAATGTGCATAATAACTTCAGAAGCTATATTTTGT AACTTCTCTCCAAAAGTGATTACAGGAATTTCTAACCGCGGAACCAAATATGTTAAAAGCTTTTCAAAGGTCTTATCATA ACATTCATAGTTTAGGTTTATCGTTCATGTCACTTTCTCGCCATTTGGGAAGTTCTTGGGTAGGTTTGCAATGACATTTA GAGCTTATGTAAAATAGTAAAGGGAAAATTTATGGGTTAACCAATTCCACCCCACCCACCCTCCCCCCAACAACAAGAGT AGTAGATGAAATAAAATCTCAGATCCAAAATGTAGAAAGAAATCCCGGCTATTATGCATGAAATTATTTATGATTAAGGG TAGGTAAACAACTTAATCAAGTTTTATGATAATAAGCGTTTATTCATAAATTAATTTGAGAAATTTATTTAAATAAGCTG AAAAGTAAGTTATAAATAATCATAAACTCTGTTAGTTTAATTAGGTGTCACATCTCGTTTACGGTTCACCTCTGCCATGT AGTACTCGTTGTGGCCACTAGACAACCTCCATTACCGCCAC
CDS sequence (LotjaGi5g1v0232800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTCTGAAGGTCCTGCAGCAGCTGCTGTAACAACAGTTCATGTAACAGGTTTCAAGAAATTCCATGGAGTTTCGGA GAATCCGACGGAGGCGATCGTCCGCAATTTGACGGAGTATATGAACAAGAAGGGTTTGCCTAAAGGTTTAGTAATTGGGA GCTGCACCATTCTTGAGACTGCTGGTCAGGGAGCACTTGTTCCCTTGTACCAGACATTGCAATCTGCCATTACTGCTGCC AAGGAATCTGAATCTTCAAGTTCTAACAGAGTTATCTGGCTGCATTTTGGGGTTAACAGTGGTGCAACAAAGTTTGCTAT AGAGCGTCAAGCTGTCAACGAGGCCACCTTCCGTTGCCCTGATGAAATGGGATGGAAGCCTCAGAAAGTCCCCATTGTCC CTTCAGATGGTGCTATTTCGCGAACACGGGAGACTACCCTTCCTGTGGAGGAGATTACCAAGGCCTTGGCAAAGAAGGGT TATAATGTGATGACATCTGACGATGCCGGCAGGTTTGTGTGCAATTATGTTTACTATCATTCTCTTCGATTTGCAGAGCA GAACGGGATCAAATCTCTCTTTGTGCACGTGCCGCTCTTCTTCACAATAGATGAAGAAGTCCAAATGCAATTTGCTGCTT CCTTGTTAGATCTACTTCCTTCAATATGTTAG
Protein sequence (LotjaGi5g1v0232800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSEGPAAAAVTTVHVTGFKKFHGVSENPTEAIVRNLTEYMNKKGLPKGLVIGSCTILETAGQGALVPLYQTLQSAITAA KESESSSSNRVIWLHFGVNSGATKFAIERQAVNEATFRCPDEMGWKPQKVPIVPSDGAISRTRETTLPVEEITKALAKKG YNVMTSDDAGRFVCNYVYYHSLRFAEQNGIKSLFVHVPLFFTIDEEVQMQFAASLLDLLPSIC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 222 | 222 | 1.8E-131 | – | |
| PANTHER | 1 | 222 | 222 | 1.8E-131 | ||
| PIRSF | 11 | 218 | 208 | 2.1E-47 | ||
| Gene3D | 11 | 218 | 208 | 7.9E-61 | ||
| CDD | 13 | 216 | 204 | 8.06702E-54 | ||
| SUPERFAMILY | 13 | 217 | 205 | 2.35E-48 | ||
| Pfam | 14 | 200 | 187 | 1.9E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Pyroglutamyl-peptidase activity | Catalysis of the release of the N-terminal pyroglutamyl group from a peptide or protein. |
Expression pattern of LotjaGi5g1v0232800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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