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GO:0005829

View this GO term in other databases

Overview

Field Value
Namespace Cellular component
Short description Cytosol
Full defintion The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
Subterm of

Relationships

The relationship of GO:0005829 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCjl

Associated Lotus transcripts 25

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0005949.1
– PREDICTED: molybdopterin synthase catalytic subunit-like [Glycine max] gi|356577365|ref|XP_003556797.1|
GO terms
4
Lj0g3v0198389.1
– Molybdopterin synthase sulfur carrier subunit [Medicago truncatula] gi|357455873|ref|XP_003598217.1|
GO terms
2
Lj3g3v1929780.1
– PREDICTED: molybdopterin synthase sulfur carrier subunit-like [Cicer arietinum] gi|502127319|ref|XP_004499653.1|
GO terms
2
Lj5g3v1531160.1
– PREDICTED: pyrrolidone-carboxylate peptidase-like isoform X1 [Cicer arietinum] gi|502116897|ref|XP_004495631.1|
GO terms
3
Lj5g3v2240960.1
– PREDICTED: diphosphomevalonate decarboxylase-like [Cicer arietinum] gi|502121015|ref|XP_004497159.1|
GO terms
3
Lj6g3v0776070.1
– PREDICTED: T-complex protein 1 subunit beta-like isoform X2 [Cicer arietinum] gi|502104047|ref|XP_004492422.1|
GO terms
4
LotjaGi1g1v0025600.1
– Adenylyltransferase and sulfurtransferase MOCS3; TAIR: AT5G55130.1 co-factor for nitrate, reductase and xanthine dehydrogenase 5; Swiss-Prot: sp|Q9ZNW0|MOCS3_ARATH Adenylyltransferase and sulfurtransferase MOCS3; TrEMBL-Plants: tr|G7K8M6|G7K8M6_MEDTR Adenylyltransferase and sulfurtransferase MOCS3; Found in the gene: LotjaGi1g1v0025600
GO terms
3
LotjaGi1g1v0438900.1
– T-complex protein 1 subunit beta; TAIR: AT5G20890.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q940P8|TCPB_ARATH T-complex protein 1 subunit beta; TrEMBL-Plants: tr|A0A1J7HDU4|A0A1J7HDU4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0438900
GO terms
4
LotjaGi1g1v0438900.2
– T-complex protein 1 subunit beta; TAIR: AT5G20890.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q940P8|TCPB_ARATH T-complex protein 1 subunit beta; TrEMBL-Plants: tr|A0A1J7HDU4|A0A1J7HDU4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0438900
GO terms
4
LotjaGi1g1v0438900.3
– T-complex protein 1 subunit beta; TAIR: AT5G20890.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q940P8|TCPB_ARATH T-complex protein 1 subunit beta; TrEMBL-Plants: tr|I1LRE4|I1LRE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0438900
GO terms
4
LotjaGi1g1v0438900.4
– T-complex protein 1 subunit beta; TAIR: AT5G20890.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q940P8|TCPB_ARATH T-complex protein 1 subunit beta; TrEMBL-Plants: tr|I1LRE4|I1LRE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0438900
GO terms
4
LotjaGi1g1v0438900.5
– T-complex protein 1 subunit beta; TAIR: AT5G20890.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q940P8|TCPB_ARATH T-complex protein 1 subunit beta; TrEMBL-Plants: tr|A0A1J7HDU4|A0A1J7HDU4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0438900
GO terms
4
LotjaGi3g1v0328000.1
– Molybdopterin synthase sulfur carrier subunit; TAIR: AT4G10100.1 co-factor for nitrate, reductase and xanthine dehydrogenase 7; Swiss-Prot: sp|Q9S7A3|MOC2A_ARATH Molybdopterin synthase sulfur carrier subunit; TrEMBL-Plants: tr|I3T2W6|I3T2W6_LOTJA Molybdopterin synthase sulfur carrier subunit; Found in the gene: LotjaGi3g1v0328000
GO terms
2
LotjaGi3g1v0328000.2
– Molybdopterin synthase sulfur carrier subunit; TAIR: AT4G10100.1 co-factor for nitrate, reductase and xanthine dehydrogenase 7; Swiss-Prot: sp|Q9S7A3|MOC2A_ARATH Molybdopterin synthase sulfur carrier subunit; TrEMBL-Plants: tr|I3T2W6|I3T2W6_LOTJA Molybdopterin synthase sulfur carrier subunit; Found in the gene: LotjaGi3g1v0328000
GO terms
2
LotjaGi3g1v0554700.1
– Chloride conductance regulatory protein ICln protein; TAIR: AT5G62290.2 nucleotide-sensitive chloride conductance regulator (ICln) family protein; Swiss-Prot: sp|Q9LVA7|ICLN_ARATH Chloride conductance regulatory protein ICln; TrEMBL-Plants: tr|I3T898|I3T898_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0554700
GO terms
7
LotjaGi5g1v0232800.1
– Pyrrolidone-carboxylate peptidase; TAIR: AT1G56700.1 Peptidase C15, pyroglutamyl peptidase I-like protein; Swiss-Prot: sp|O73944|PCP_PYRFU Pyrrolidone-carboxylate peptidase; TrEMBL-Plants: tr|I3SB13|I3SB13_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0232800
GO terms
3
LotjaGi5g1v0232800.2
– Pyrrolidone-carboxylate peptidase; TAIR: AT1G56700.1 Peptidase C15, pyroglutamyl peptidase I-like protein; Swiss-Prot: sp|O73944|PCP_PYRFU Pyrrolidone-carboxylate peptidase; TrEMBL-Plants: tr|I3SB13|I3SB13_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0232800
GO terms
3
LotjaGi5g1v0232800.3
– Pyrrolidone-carboxylate peptidase; TAIR: AT1G56700.1 Peptidase C15, pyroglutamyl peptidase I-like protein; Swiss-Prot: sp|O73944|PCP_PYRFU Pyrrolidone-carboxylate peptidase; TrEMBL-Plants: tr|I3SB13|I3SB13_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0232800
GO terms
3
LotjaGi5g1v0345200.2
– Diphosphomevalonate decarboxylase; TAIR: AT3G54250.1 GHMP kinase family protein; Swiss-Prot: sp|F4JCU3|MVD2_ARATH Diphosphomevalonate decarboxylase MVD2, peroxisomal; TrEMBL-Plants: tr|A0A1J7IDM5|A0A1J7IDM5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0345200
GO terms
3
LotjaGi6g1v0145000.1
– T-complex protein 1 subunit beta; TAIR: AT5G20890.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q940P8|TCPB_ARATH T-complex protein 1 subunit beta; TrEMBL-Plants: tr|A0A151TNM7|A0A151TNM7_CAJCA T-complex protein 1 subunit beta; Found in the gene: LotjaGi6g1v0145000
GO terms
4
LotjaGi6g1v0145000.2
– T-complex protein 1 subunit beta; TAIR: AT5G20890.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q940P8|TCPB_ARATH T-complex protein 1 subunit beta; TrEMBL-Plants: tr|A0A151TNM7|A0A151TNM7_CAJCA T-complex protein 1 subunit beta; Found in the gene: LotjaGi6g1v0145000
GO terms
4
LotjaGi6g1v0145000.3
– T-complex protein 1 subunit beta; TAIR: AT5G20890.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q940P8|TCPB_ARATH T-complex protein 1 subunit beta; TrEMBL-Plants: tr|A0A151TNM7|A0A151TNM7_CAJCA T-complex protein 1 subunit beta; Found in the gene: LotjaGi6g1v0145000
GO terms
4
LotjaGi6g1v0177300.1
– Molybdopterin synthase catalytic subunit; TAIR: AT2G43760.1 molybdopterin biosynthesis MoaE family protein; Swiss-Prot: sp|O22827|MOC2B_ARATH Molybdopterin synthase catalytic subunit; TrEMBL-Plants: tr|I3S4E4|I3S4E4_LOTJA Molybdopterin synthase catalytic subunit; Found in the gene: LotjaGi6g1v0177300
GO terms
4
LotjaGi6g1v0177300.2
– Molybdopterin synthase catalytic subunit; TAIR: AT2G43760.1 molybdopterin biosynthesis MoaE family protein; Swiss-Prot: sp|O22827|MOC2B_ARATH Molybdopterin synthase catalytic subunit; TrEMBL-Plants: tr|I3S4E4|I3S4E4_LOTJA Molybdopterin synthase catalytic subunit; Found in the gene: LotjaGi6g1v0177300
GO terms
4
LotjaGi6g1v0186100.1
– Molybdopterin synthase catalytic subunit; TAIR: AT2G43760.1 molybdopterin biosynthesis MoaE family protein; Swiss-Prot: sp|O22827|MOC2B_ARATH Molybdopterin synthase catalytic subunit; TrEMBL-Plants: tr|I3S4E4|I3S4E4_LOTJA Molybdopterin synthase catalytic subunit; Found in the gene: LotjaGi6g1v0186100
GO terms
4

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0030366
Molecular function Molybdopterin synthase activity 1 4.00