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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0232800 |
Transcript ID | LotjaGi5g1v0232800.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Pyrrolidone-carboxylate peptidase; TAIR: AT1G56700.1 Peptidase C15, pyroglutamyl peptidase I-like protein; Swiss-Prot: sp|O73944|PCP_PYRFU Pyrrolidone-carboxylate peptidase; TrEMBL-Plants: tr|I3SB13|I3SB13_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0232800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:54031454..54035270) extracted from Lotus japonicus Gifu genome v1.2.
CGGAGTTGGAGGGTGAATGTAACTTGGATTCCTCGAGAGGGTAATAATGCGGATGATTGACTTGTTAGGAAAGGAGCTCG TAGCCCACCAACAACCATTGCATTGTTTTTTGAAAGTGACTTGCTGCACAGTCGCACGTATGACGTAACTCTCTCCTCTA TTATTTTTGGTATTTCTTCTTCTATTAATTATTTATATTTATATTTATATATAATATTGTTGCGTTCTCTTCCTCTTTTC TTTTGTCTAAATCTAATCGGAATCTTCACCAGTTAATCAACTTTGAGTAGATAAAGACTGGAGGATGCGTTATCTCTTTG ATTGAAGCTTCAAGATTGATTGTATTATTCCCGGTAAGGAAAGGAAACTCTCTCTCTCTCTCAATTCTCCAAACAAACAC ATGCTTAATCTTAATTATCATGTTTTTTGATTCGATGTAATATTCCTGGGTATTTCATGAGTTCATGATCATTTCATTGT GATCGATCATGTTTTGGTTTAAGGTTGCTTTTTGTTTCTGGGTATACTATAATTCAACCTTAAACCCATGTGTTCTGTAC TTCTGTTCTGTCTCCTCGTACACCACGAATTCTCTCTCTCTCTCTGAAACGTGTGGAAAAATCAAATTATCTTCCTTTTT GTCACTCTTGAAAATGGGTTCTCTTCAATTGTTATCGAAACCTTAGATTTGCTTGCAAAATTATATCTTGATGTAATTTC TTTTGTATATAGGAAAACGGTTCAATTTATCATTTTTGTGCCCTGTTTACTCAAATTGGCTCATAATTTGATGCAGGTAT TGTATTTAGAGAGACTCTAAAATAATTCAGACCGTCATCGGCAGATGGGGTCTGAAGGTCCTGCAGCAGCTGCTGTAACA ACAGTTCATGTAACAGGTTTCAAGAAATTCCATGGAGTTTCGGAGAATCCGACGGAGGCGATCGTCCGCAATTTGACGGA GTATATGAACAAGAAGGGTTTGCCTAAAGGTTTAGTAATTGGGAGCTGCACCATTCTTGAGACTGCTGGTCAGGGAGCAC TTGTTCCCTTGTACCAGACATTGCAATCTGCCATTACTGCTGCCAAGGAATCTGAATCTTCAAGTTCTAACAGAGTTATC TGGGTGAGTTTCTCATATACTTGATGTGTCGGCTGGATCGGAGTTCATGCTCTTTTTTAATGATTCCTTGAGTTCTCATT CATGGAATCAGATCAAGTTTACGCCTCTCCATGAATTTTATTATTTAAGGGAATCAGATCAAATTCTCATTCATAGAATC ATATATACTAGTCACAACTAATCAAAAACCAAAGATAACTTCAAAATAGTCCCCTTGAAAGCTATTGTGTAACTAAAACT GCCTTAATCTTTTAAGGTAGTCTGAACTGAACTGAAATTTCTTTAAAAGGGTTAGTCTAGAACTACATTGAAACCTCTTA GGAACTTTCTTTCTTAGTACCTAAACCGTAACGCTATGGCTGAACTAAAACGGATAACATATAATGGTGAACAATATTAA GATCGTGTAATTGGGATAAGAACCCTTAGGGAGAATGGTGAAGAGGTAACCAGCTGATTAAAATAAGCAGCATTTGATTA TATTTTTGTTTCTACATTCATGAATCTTCAGTTCTGGCTACTTCTGAGTTCTGATCATGTTTTTTTCAGCTGCATTTTGG GGTTAACAGTGGTGCAACAAAGTTTGCTATAGAGCGTCAAGCTGTCAACGAGGCCACCTTCCGTTGCCCTGATGAAATGG GATGGAAGCCTCAGGTCAGATTAGAATAGTGGATGCATTCTAAATATGCTTACTCTATTGTTCCTTTAGTGAAATTTCAA AAATTTGTATGTTGCAGAAAGTCCCCATTGTCCCTTCAGATGGTGCTATTTCGCGAACACGGGAGGTAAATTGGATCACT GATTCTTCTCACACTTACTTTCCTTAAATTGTATTCTTGATCTTGATTCTGCGGTTAGGATCCCCATAATCATTTCAGGG GAGAAACTACAAAGTGTAGCTTGTGGGGTTACCTTGCTTTGGATTGTGTGTCCACTGCCAATTCAAACACGCTCCTGTGT AGTGATGTTGAAATTTGCTTTTCATATAGAATAGTATTTATTTTGTATCCTCCTTGCAAGAATTTAAAGGGGCAACATAC TATTCTAAGTATCATTTAGCAGGTTTTTCAATTGTCTTTTGGACCCATGCACTAAACTTTATGCTCTTCATTTGTCAAAA CTTAAAACTAATGAGTTATGAAGGAATTTTTTGTTATCAGTATGTGCCTCTTGATGGAGGCATATGTAGGCACAAAGTTA TTGGTGCACATATATACAACATGAAACCTTCTAAGAAAACTCACGAGTTAATTGCCTATATGAGTTTACGATCCTAGGTT ACAAAGTGAAGTTACATCGTATGTAAACTCGTTTTCTGATAAACTCGGATAAACTCGCAAATTCACTACCGAGTTCAACA GTTCAGCAAGAAAGGGAGAAAATTTTCTTTTTGCAAAAATGATGCCATTTCATGATACAATCTTTGCAGTATTACTTTAT TCTTTGCAAACCCCTCTCATCCACGTCCTCTTCCTCTTTTCCTCTAATATTTATTTGTCTATTGTGCACAAGAACCAGTT GCTGCAATAATACTAAAATTGTGTACGAATCCCTTGACTCCGAATCTTTTTGTTATATGAAGTCTTCTTGGTTTAAAATT ATGAATTGATAATCGGAGACCTAAAATATAGCTAGATTTTAACTTGTTATATAACTTCCATTGTATGATTTGTCTATTTA AGCGTATTTTTACTTTAATTGTGTTTTTAATCATTATTGTGTTTTTTAAATATTCTTTTTGGATGAGATAAACTCTTATG AGTTTACGAGTCCAGTTTACAAGTTTACAGGCTTACGTAAATCTCGAGTTTGACAACCTGGATTGCTGTATAACAACTCT TCCCTGTTTCATCTGTCATTTGATTATGCAGACTACCCTTCCTGTGGAGGAGATTACCAAGGCCTTGGCAAAGAAGGGTT ATAATGTGATGACATCTGACGATGCCGGCAGGTTTGTGTGCAATTATGTTTACTATCATTCTCTTCGATTTGCAGAGCAG AACGGGATCAAATCTCTCTTTGTGCACGTGCCGCTCTTCTTCACAATAGATGAAGAAGTCCAAATGCAATTTGCTGCTTC CTTGTTAGATCTACTTCCTTCAATATGTTAGTAACATCCGGCTCCTGTAATTGTTCTGGTGTTGCAATGCATATGAAAGT GGATGAGTGTTCCTTTAATGAAATGTTATAAATTATTGTGATAATAAGATATTGTCATGAAATGGAAACGGTTGATTGAA AATGGCATGTGTGGCTGAGCCATGAGCATTTGCTTGGGCTGGCAAATGATCCTGATTAAAGGCTTCAGCAAAATGTTGAC ACAAATTGACATCTTCAATGTTACAGTGTGAATAATGTTCATTTTTCTTTTCCTTAGTACTGCCCTTGTTATTTCTGCAA CTTGCTTATTGTATCCAATAAGCATGTCACAAAGGTTCCTCCCGTTAGATGCTTAGATTTCATTTGTTTCTCGGTTACGA GTGGCATAAACTGCAGTTCAGAAAACTCGACAAGAGACATGAGTTTCGGTTGTTAACCTGCCTCGGAAAGATGAAAATGA GGTGTGCAACGGGCTCTTAATAGATTGATGAATTACCTGTTTGAATTGATGGTGGAATACAATAATGTGCATAATAACTT CAGAAGCTATATTTTGTAACTTCTCTCCAAAAGTGATTACAGGAATTTCTAACCGCG
CDS sequence (LotjaGi5g1v0232800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTCTGAAGGTCCTGCAGCAGCTGCTGTAACAACAGTTCATGTAACAGGTTTCAAGAAATTCCATGGAGTTTCGGA GAATCCGACGGAGGCGATCGTCCGCAATTTGACGGAGTATATGAACAAGAAGGGTTTGCCTAAAGGTTTAGTAATTGGGA GCTGCACCATTCTTGAGACTGCTGGTCAGGGAGCACTTGTTCCCTTGTACCAGACATTGCAATCTGCCATTACTGCTGCC AAGGAATCTGAATCTTCAAGTTCTAACAGAGTTATCTGGCTGCATTTTGGGGTTAACAGTGGTGCAACAAAGTTTGCTAT AGAGCGTCAAGCTGTCAACGAGGCCACCTTCCGTTGCCCTGATGAAATGGGATGGAAGCCTCAGAAAGTCCCCATTGTCC CTTCAGATGGTGCTATTTCGCGAACACGGGAGACTACCCTTCCTGTGGAGGAGATTACCAAGGCCTTGGCAAAGAAGGGT TATAATGTGATGACATCTGACGATGCCGGCAGGTTTGTGTGCAATTATGTTTACTATCATTCTCTTCGATTTGCAGAGCA GAACGGGATCAAATCTCTCTTTGTGCACGTGCCGCTCTTCTTCACAATAGATGAAGAAGTCCAAATGCAATTTGCTGCTT CCTTGTTAGATCTACTTCCTTCAATATGTTAG
Protein sequence (LotjaGi5g1v0232800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSEGPAAAAVTTVHVTGFKKFHGVSENPTEAIVRNLTEYMNKKGLPKGLVIGSCTILETAGQGALVPLYQTLQSAITAA KESESSSSNRVIWLHFGVNSGATKFAIERQAVNEATFRCPDEMGWKPQKVPIVPSDGAISRTRETTLPVEEITKALAKKG YNVMTSDDAGRFVCNYVYYHSLRFAEQNGIKSLFVHVPLFFTIDEEVQMQFAASLLDLLPSIC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 222 | 222 | 1.8E-131 | – | |
PANTHER | 1 | 222 | 222 | 1.8E-131 | ||
PIRSF | 11 | 218 | 208 | 2.1E-47 | ||
Gene3D | 11 | 218 | 208 | 7.9E-61 | ||
CDD | 13 | 216 | 204 | 8.06702E-54 | ||
SUPERFAMILY | 13 | 217 | 205 | 2.35E-48 | ||
Pfam | 14 | 200 | 187 | 1.9E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Cellular component | Cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. | ||
Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
Molecular function | Pyroglutamyl-peptidase activity | Catalysis of the release of the N-terminal pyroglutamyl group from a peptide or protein. |
Expression pattern of LotjaGi5g1v0232800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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