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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0234600 |
| Transcript ID | LotjaGi5g1v0234600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pectin acetylesterase; TAIR: AT5G26670.1 Pectinacetylesterase family protein; Swiss-Prot: sp|Q66GM8|PAE10_ARATH Pectin acetylesterase 10; TrEMBL-Plants: tr|I1LAY0|I1LAY0_SOYBN Pectin acetylesterase; Found in the gene: LotjaGi5g1v0234600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:54266011..54271297) extracted from Lotus japonicus Gifu genome v1.2.
ACGTGATTGAGAACTTAAAAAAGGAAACAGATTCTGAAACTAAAGTCAGGAAAGGAAGAAAATGACTATATTTTATAGCA TAAAATTAAGTATTAGTCAAGAGTTGTTCATAATTAATCACGCTGTGTGCAAAATGCACACTATAAAGAACATTTGTTGT TGTTGGATGTAACAATGTGCAGCTGAAGCATCCACCCACCAGAAGGAAAACACAAGAGTTATTTCAAGAAATAAAGGTAT GTGCCTGCTGCATTCCCCCTATCTGTGTGTGAATTATTGATTTTGAACATGTTGTGTGTGACCATTTGTGAGATAGTGAT TATTATTCATTTGCCTACCTCTTTGTTGTTTTTGAATGTTTCAAGTTTCAACAATGTTGTAACTCTAATCAAGGTATCAA CTATAGAATTTCTTAACTAACACAATCAAACAAGCAACTCGTTGATATGTTTTACTTCCTGAACAATGACTCGTCAACAA TCAGCAAGAAACCCAGTTAACTCGTTCCAGAAAGCCTTTGCTCCCTCAGTGCTGCGTTTCCTTGTTATTACATTTTGTGC TGCTGAGATACATTGTAAAGTACAGTGAATCAAGGCTTAGGTTTTTGTTTTTTTTTTGGGTCAAAACCTTAGGTTGGTTT AGTTCATTTGGGTAACAGAAAAATTGGGCTGGGCCCCTAACTTAGGTGACATGTTCTTTTTATGGACCAAGGAAAACAAA AGGAGCAAAGTTAGTTTGAGACTTTTTTTTCTTGACTAGTATCGCTAATCGTGAGATTAATCTCAAGTCCCACTGCTTGC GCACTAAGCAGTAAGGGGTTGACCGATCACATTAATTGAGTAGACTTCTCCCAACAAGTCTTTCTCCATACACACTGTCT AAAGATCGAGCTTTGAACTAGATGCTTAAGGAGTTCAGTTATCTACGTGTGCGGCCGGTGCTAGAACTTGTTGGTACTAG TCTTACTGGATTACTAGATTGAACCTATAACAAATACAAATTACATGACCAACTACCAAATACTGGGCATAGTAATCCTA TCCAGTTGGTGCTATGTGGTCTAGAAAATAAGTATGAAGTCGGTGGACTTCATGTTTAAACTACATTTGAAAGAGATTAA CTACTTTAAGTAAGTATTTGGTTAATCTTGTTTGGTCAAAATTTTTAGACTAACTTATAGTAAAAGTGTTTATTACTAGT TGCTATGCTAACCAAACACACATTACTATAAAAGGTTTACATGCAAATTATATGACCGCAATTGGTTTACTTATGTTGCG TGGAGAAATGTGAGAACTCATGTCAATAGAAATGGAGGTGACAACACCATAGACAGATCAGAGATTACCCAGATAGCTAG GAACAACTAATATCTAGAATAGAAATTGAGTGTTGCGTGAGTGCAATGCAAACGCAATCTGAGTGTTGCTATTTCTGGAA TTGGAGTGGCGTGATGGTCATCACCACAGGCTATTATATTGCTCCAAAGAATGTTTCATATAGCTGGTGACCTTTGTAAT CAGTAACGAATTCTTTTTTCTTTTTTTATCATTTCAAATATTCCAAGCTTAATTGGTAAACCTTTTCATCTAATGTAGAA AAAGAAAGTGGTGAAACTTGAAAGCAGACCCATAAATTAAATTTAAACTCAAAGTTTTGTTTTTATCCTTGATTTTGTCG GCAATTCTTAGTTGGGTACAACAAGTTCTAGATCCATTTCACATATCATCACCTTCTAATCTTCCATTGTTTCTTTCAGA AACAAAGTGGTAGAGTCAGAAGAGCCATGGCCATGAGGAACATTTTCTGGGTTGGCATTGTAATAGGACTTGTTTTTAGC AACTGGGTTGATGGCCTTGCAACCTATGATCAATATCATTACATGAATGAAACAGAGCTGTCTTTGTTGGAGGCTAATGA AGCTTCTTCCCCATCCTTAGTTGGGAGGAGACCTTTAATGATAGGACTCACTCTTATTCAAAATGCATGGACTAAAAGAG CAGGTAATACCCAATTGCTACCTATAACCTCTTTTGAGTTTATTTCAATAAGCTTCTAAAAAATAAGTGTTTATGCAATA AATGCTAATTGCTATAAGCTCTTAATTATGCTATATATCCAAACGCACCCTAAATATACTTCCTTCTTTTGTGTGGTAGT CTGCATGGATGAAACATTGCCTGGATATCACCTTGATCGAGGATATGGATCAGGAGCAAACAGCTGGCTTGTTAATTTAG AGGTATCACATGATCTTTCAAATTGTTCTTAATACAGGCCTTGGTTTTATTTTTCCATAATAGGTTCAACTTTTTTAGCA AAAAACCATCTCATGCTAGTTTAATGAGTATAGCATAAAGGTTGGCAGCATTAGAGTTTCTAGCTAAGGTGACAAAATGT TTAGAAATAATCGGATACAAGTTTGAGATCTAAACATGTCATATATTGCTGTTTTCAAGTATTATTTAGTGTATGTTTGG ATATAAGTTGGGTGCAACATGAACGGACTTTCATCTTAATGATAAGAAAAGTTTCATTCACTTTCTGTCTTGAAGTGAAT GCTAATGTCCGTTTGCATTGACGTCAATGAATATCCACACATAGCCTTATTGCTCAAGCTACTTCTCTCTAGGGTGCTAT AAAAATATATGTTGGTATTTAAGTGAAGATTCTTGGCAGGGAGGTGGGTGGTGTAATAATATCAAAACATGTGTTTATCG CAAGACATCACGGCGTGGATCATCGACATTCATGGAAAAGGAGATACCATTCACAGGAATATTAAGCAATGATGCAAAAG AGAATCCAGGTTTTCATTCAATTGACCTACCTGAACCAAAATTCTGCTTTATAAAATTGGTTAGCCGTTTGACTCACATT ATTCTCTATGGATTGTAGATTTTTTCAACTGGAACAGGGTAAAAATCCGTTATTGTGATGGTGCTTCTTTCACCGGGGAT GCTGAAGATAAGGTAGGTTTTGATATCTTGGAGAATTTTTTTTCCTATAACACTGTTGATAACACTTTATGCACATACAT AACTTGACATTCATCAAAACTCAGTGAAAATTGTCTGTGGACATAGGTTTCAGGACTTCAATTTAGAGGACAGCGTATTT GGTGGGCGGCAATGAATGAATTGATGTCAAAGGGAATGCGTTTTGCTAAGCAGGTTTGGTTTTATTAAAAAACATATCCG CCTGCGCAGCGCGCGAATCAGCAATAGTTCTCATGTTAATTAGATGCTGCTATTATATTTTTGGTTCAGGCTCTTCTTTC TGGATGCTCAGCGGGTGGTCTAGCTACTATTATACACTGCGATGAATTTCGAGGCCTATTTCCATGGACTACCAAAGTGA AGTGTCTCAGCGATGCAGGGTTGTTTCTTGATGCGTGAGTGGCAAACTTCAACATTTCTTATTTGAATGCATCATTACCA CATGATTTTTGGTCCTTAAATTGATTCTTAATTGTTTTCCCTCTGAATTGTAGCCTTGATGTATCTGGCGGGCGCACCCT CAGGAACTTTTTCCATGGTGTTGTAAGGCTACAGGTACTGATAGTTCATTGTTTTATTTAAGGTCACCAATTTATCATAT GAGTATAACTTATAGAGCATGATGAGAAATGTTTTAATTTGAAAGTTGAAATTTGGACATTTGACATGGTTATAGCTAAT AAAGCATGATGAATAATGTTTTATCCATTCATTACAGGGAGTGCAGAACAATCTGCCGCGCACTTGTACTAATCGCCTTA ATCCTACTTTGGTAATCAGTCACTGATATCTCTAATTCTGAAAATTTAGAAATATTTGGTTCATTTGAATGAGTATGTGG AAAATTGAATGCTGCATAATTGTGCTGACTTTTCAGTGATGTTTCCTTTACCCATCTTTCAGTGCTTCTTCCCTCAGAAC TTGATTGCCAATATTAAAACCCCGCTGTTCATTCTTAATAGTGCCTATGATTCATGGCAGGTATATACATGATTTCCCAC TTAGTTGTATTAAACTCTCCTGATAAGTCATATGTTATATGATCCTTAGTTTTGAGTCAATTTTAGACATTTTATACTAA TCAAAAGTACTGTTCTGTTCTTCATCAGATCATGTCAAGTTTAGCAGCTCCATCAGCAGATCCACATGGCTATTGGCGTG ATTGTAGATTAAACTATGCTAAATGTTCTAGTTCACAAATACAATTTCTGCAAGGTGGTTTGATGTATAAGAAATAGTTT TCATTAGAAGTACATAAATGTTTTGATAAATCAGTCAGTGTATTTACTATTAAGCCATTTCACTATATCTAATACAGGAT TCAGGAACCAAATGCTGAATGTTGTTAGCGGTTTCTCAAGATCAAATCAAAATGGAGTGTTCATAAATTCATGTTTTTCT CACTGCCAATCTGAGAGGCCTGATACATGGTTTTCTTACAATTCTCCTGTCATAGCAAATAAGGTGAGGGCAACATGCCT ATAATGCATTTTTAGTTAGAAGTCTTACAATTGTGCTAATAATTGTGGTATGTTAGTTCATCACTGTCACTATTAAGCAC GTATAAAAATGTCTATCATATCATGGTCATCTTCCTTGTCACTGCTATCTAAGACTTAATCATGTTCTCTGACTCTTTCT TTCATCTCTATGCAGAAAATTGCTCTGGCTGTTGGAGACTGGTATTTTGACCGAGCTGCGGTTAAGTCCACAGATTGTCC TTACCCTTGTGATAATACATGTCGCAATTTGGTCTTCAGATGAGGCAAATTTCATTCATCACTCATTTGGGCGAATTCTT GTCTGCAATTAGGAGATATGCTATTCAGTTAATGATCAATAACAATAAAAGAAAAACCACTAGAAATGGTTAGTGGTGAG AAACTTAGATAGTTCACATGTGATTATAGCAAAAAAGAAGGGCATGTTTAATAAGCTTCATCCATGATTTATTAGTTGGT GAAAGAAACTTTCATATTTAGATCATTACTTGGAATGATGAGGCAAATGCATTTAATTTTCAGAGTTTGTGAGAGATGAT GGACAATTAGAATTTACACACTGTAATAGGCTGAACACTTGCAATGAATATGATTGAATGAGATCATCTCAATCTCATAT CTTCCTTTTAGTTGGAATAAAAGGTTCATGGTAACACCTAGACTTCCTTTTTACCATACTCCAAGTCTCCAACCAACTCG GTGTTTCTAATTTTTGCATATTTCATATTCAACGATGTAATATTATAATTCATAAATTCTTTCAGTTTGATTTGATTGTC ACTGCTA
CDS sequence (LotjaGi5g1v0234600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCATGAGGAACATTTTCTGGGTTGGCATTGTAATAGGACTTGTTTTTAGCAACTGGGTTGATGGCCTTGCAACCTA TGATCAATATCATTACATGAATGAAACAGAGCTGTCTTTGTTGGAGGCTAATGAAGCTTCTTCCCCATCCTTAGTTGGGA GGAGACCTTTAATGATAGGACTCACTCTTATTCAAAATGCATGGACTAAAAGAGCAGTCTGCATGGATGAAACATTGCCT GGATATCACCTTGATCGAGGATATGGATCAGGAGCAAACAGCTGGCTTGTTAATTTAGAGGGAGGTGGGTGGTGTAATAA TATCAAAACATGTGTTTATCGCAAGACATCACGGCGTGGATCATCGACATTCATGGAAAAGGAGATACCATTCACAGGAA TATTAAGCAATGATGCAAAAGAGAATCCAGATTTTTTCAACTGGAACAGGGTAAAAATCCGTTATTGTGATGGTGCTTCT TTCACCGGGGATGCTGAAGATAAGGTTTCAGGACTTCAATTTAGAGGACAGCGTATTTGGTGGGCGGCAATGAATGAATT GATGTCAAAGGGAATGCGTTTTGCTAAGCAGGCTCTTCTTTCTGGATGCTCAGCGGGTGGTCTAGCTACTATTATACACT GCGATGAATTTCGAGGCCTATTTCCATGGACTACCAAAGTGAAGTGTCTCAGCGATGCAGGGTTGTTTCTTGATGCCCTT GATGTATCTGGCGGGCGCACCCTCAGGAACTTTTTCCATGGTGTTGTAAGGCTACAGGGAGTGCAGAACAATCTGCCGCG CACTTGTACTAATCGCCTTAATCCTACTTTGTGCTTCTTCCCTCAGAACTTGATTGCCAATATTAAAACCCCGCTGTTCA TTCTTAATAGTGCCTATGATTCATGGCAGATCATGTCAAGTTTAGCAGCTCCATCAGCAGATCCACATGGCTATTGGCGT GATTGTAGATTAAACTATGCTAAATGTTCTAGTTCACAAATACAATTTCTGCAAGGATTCAGGAACCAAATGCTGAATGT TGTTAGCGGTTTCTCAAGATCAAATCAAAATGGAGTGTTCATAAATTCATGTTTTTCTCACTGCCAATCTGAGAGGCCTG ATACATGGTTTTCTTACAATTCTCCTGTCATAGCAAATAAGAAAATTGCTCTGGCTGTTGGAGACTGGTATTTTGACCGA GCTGCGGTTAAGTCCACAGATTGTCCTTACCCTTGTGATAATACATGTCGCAATTTGGTCTTCAGATGA
Protein sequence (LotjaGi5g1v0234600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAMRNIFWVGIVIGLVFSNWVDGLATYDQYHYMNETELSLLEANEASSPSLVGRRPLMIGLTLIQNAWTKRAVCMDETLP GYHLDRGYGSGANSWLVNLEGGGWCNNIKTCVYRKTSRRGSSTFMEKEIPFTGILSNDAKENPDFFNWNRVKIRYCDGAS FTGDAEDKVSGLQFRGQRIWWAAMNELMSKGMRFAKQALLSGCSAGGLATIIHCDEFRGLFPWTTKVKCLSDAGLFLDAL DVSGGRTLRNFFHGVVRLQGVQNNLPRTCTNRLNPTLCFFPQNLIANIKTPLFILNSAYDSWQIMSSLAAPSADPHGYWR DCRLNYAKCSSSQIQFLQGFRNQMLNVVSGFSRSNQNGVFINSCFSHCQSERPDTWFSYNSPVIANKKIALAVGDWYFDR AAVKSTDCPYPCDNTCRNLVFR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| SignalP_EUK | 1 | 18 | 18 | - | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| Phobius | 6 | 17 | 12 | - | – | |
| Phobius | 18 | 23 | 6 | - | – | |
| Phobius | 24 | 422 | 399 | - | – | |
| PANTHER | 45 | 422 | 378 | 4.2E-218 | – | |
| PANTHER | 45 | 422 | 378 | 4.2E-218 | ||
| Pfam | 56 | 401 | 346 | 5.0E-159 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi5g1v0234600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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