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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0242400 |
| Transcript ID | LotjaGi5g1v0242400.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Insulin-induced protein; TAIR: AT4G01935.1 insulin-induced protein; Swiss-Prot: sp|Q49434|T1SX_MYCGE Putative type-1 restriction enzyme specificity protein MG438; TrEMBL-Plants: tr|I3T1A7|I3T1A7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0242400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:55074473..55077517) extracted from Lotus japonicus Gifu genome v1.2.
CCTGAGCCTCTTTCACTCGGACCACACATTATTGGTCTAACAAAGCCGTTGAAATGTAGAGAATACAGGATGGTAAAAGA AATAGACATCACCGAATCATTGGTTTCGAGAATAACAATTTTTCGCACAATTGTACCTATGTATTGTAAAATTCTACATT CATATTACAGGATTGTTGGTCAGTACTCCACCTCAAGATGGTGGTATAATGAAAGAAACAAGGAAAGTAAGAAAGATTTT GACCTTTGGTATCTCAAGGACTTCACACTTTGTGGTCACTATTAAATAGGCATTTGATATGTGGAAAATAACTAGCAAAA AGGCAGAGCAGCAGCAGTAGTAGAAGACAACATTCTTCTCTTTTCCTATCCCAAAGACCATTCAATTGCTTTCTTTCTCT GAATGCTCACATAACAGCAATAATATGCAATACCTTCTTACACCTTGTTCCTCTTCTTTTCTTCAGCCTTATGCTCTCCA TCATCACCCTCATCTTCTCCATAAAGTTCGCAGACCGGGTCTACTTAAGCCTCACTGTTCTCAGGGACAGCAGAGCCTCA GAACTACTTCATGGAGTCAGGTGTCACTTTCACTATTTGGCACAGGCTTCTTGTTTGGTCCCCTTATTGATGGACTCCAT TCCAGAGTCAATCTGGTGGTGTACAAGTCAGGATCAATTGACATAGGTCCACTCCACACAAACATCTGGGTAGGTTTCAA CTTGAACTCCCTGCACAATTTCATGTGCCCTTCTGTCTGCAGTTTTCATATTTACCATATTATTGATTTATCTGTGTTTG ATATTGATAGGTTCCTTTCTTGCTGGGGTTGTTTTACTGTTCGGTTGGTTTGCTTCAACTCTACCTAGATGAGAGGGTCT TAAACAAGGTTCAAGAGGGAAGTTTTGCAAAAACAATTGTCTCGCTGATGTAAGTACCTCTTCTGCAATATTATAAGATA AAAATCCTTGTACAATTAATTCTAAAGTCATAATTAATTATAGGGAGAAACTTATGTGAGTAGCTTCTGAGTGTTAGAAT TGATTTTAAGAAAAATTGAACTGATCCAAAGGTGCTATATATAAATATGGTTTTATCTTCTTAGATTGCTGGTGCTGTTC ATAGCATTGAGTGCTGAACTCTACAAAGCCGGAATTGCAAAGAACACTGAGGCCTACATATTATTTGCTGCAGCTGAGTT CATGTGGTTTTTATTGGATAGGACATGGCCAGGCTTCACCCTGGCATGTCTCGTTGGGCTTGCATGCCCGCTCGCTGAGA TACCCATTATGAAGTAAGTGCATGTTCGAAAATCCTTCTACAAATTATCCTACAGTCAGAATCAATTATGAGCGAGAAGC TTCTGAGAGTAATTTCTGAGTTACAAAATTGATTTTGTGCAAAGAGATGCTAATTGAAAAAATGCTATAAAGCTTCAATG TTTCCTGCCATGGTACATGATGTGACCAAGTGACAATATGCTTGGCTGTTGATCTCTTTTGCTTATTTCAGGTTCTTCCA CCTTTGGTACTATCCTCAAGCGAATATTGAACTCTTTGGTCAGGTAGTTCATGTTTCAACCAGTATCCGCTAAAAGTGAT TTGTGAATTTGTTGATAATTTCTGGTACCATCTCTCAGTGCCATCTTTTATGATCAAGAGTCCTATCCTAATACACAATT ATAATAAACTCTGCATGCAGGGGCTAGTTACTTGGACTCTCACTTGCTACTTCGTATATACGCCTTTCTTGATCAATTTG TCCCGGTGGTTGAGAACAGTTTTTACTGCTAAAATAGAGGACTCTGCCTAAAAAGAAGAAAAAAATAGATAAGCTTAAAT ACATTTGATTTTCATCCAAACGGGTTCTAAATTGCAACCAAATCACAGCCTTTAGCAAACGCATACAGCGTAGAGAGTTA AAGGTATTCTAGTCTAATCAAAGGCAATAAATTCATATGATGCTAAAGCATATGCAAATTTTCCTAGCTTAGGTTAAGAA TTGCAGTTTAGAAAATAAAATATAAGATTATGTCATTTGGTTTGATTTAAACATTAACAAATTTGTCATTTCTTATGCAT ATTGATGCTCTTGATCACAATTTTAGTAACCAATATTCAAATCAAAATTTATTTGTAACCATGAGGTGTGGCGTAGTGGT TGCTCACATCATCCCTTAATCATGAGGATGGTGCTTCATCCTCGCTCATGGAAATAAAGCACACGTTGTGGTCAATGATT TACCACTTAATATAAACATCCATGACAAATAAATTATTCACTGCTTAGTAATAGTTGGGCAACAACAACTGATTAATCAT CAAATACATTGTGATATGGAAGGAGAAACTAAGATGAGGTCCTTTGTGAAGAACTTATTGAGTCATCATTCAAGACACTT TTGGCATTTATGGTTACATTTTTGGGCTGTTGCGAAAAAGCAATAATTGTTGTAGTGACACTGCATCCATTTAATTTTAG CTTGTATTGATAGTCTTGTATTTGCTTCATTACTTGTATTTTCTTTTATTTCCTTTTCTTTTGCTATTTTTTTTTTGCTT GTATAATAGTCTACTTAGAATTTAGAATTGAGCTATGGGACTTGATGGTATTTTTAGGGCTTTGTGTTTCTAGACCATGT AAGATAGGTCATTGGGCTTTACTTGGGCCTAATTAAGTTTGGTTGGACTTACACTAATTGCATTAAAGAGCAAGACATCT TGCTGAGCCTTAGGTTTAGGCCCAATAAGCAGTTCCTCTTTTTTTTTTTTTCATTTAATGATTACTTATTTAGAAGTCAC AATAGGATCAAGCACTTGTCATTGTGACTTTTCAATCCTATGATTTTACCAAACTCCCAAGTTTGTTGCGATCACTCACA TGACTTATCATTCTCTCCAAGGAGTTTGAGGCGCCTAACCATACTTTTTCCCTCCATATTTTTGAATTCTTCTTCCTTTT GGTGACTTTTTGATGCAACCAAGTTGGATCCACACTAGTAGAAGTTGTTCCATGGCATGAATCTTCAATCTTACATCACA TTGCC
CDS sequence (LotjaGi5g1v0242400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAATACCTTCTTACACCTTGTTCCTCTTCTTTTCTTCAGCCTTATGCTCTCCATCATCACCCTCATCTTCTCCATAA AGTTCGCAGACCGGGTCTACTTAAGCCTCACTGTTCTCAGGGACAGCAGAGCCTCAGAACTACTTCATGGAGTCAGGTGT CACTTTCACTATTTGGCACAGGCTTCTTGTTTGGTCCCCTTATTGATGGACTCCATTCCAGAGTCAATCTGGTGGTGTAC AAGTCAGGATCAATTGACATAGGTCCACTCCACACAAACATCTGGGTTCCTTTCTTGCTGGGGTTGTTTTACTGTTCGGT TGGTTTGCTTCAACTCTACCTAGATGAGAGGGTCTTAAACAAGGTTCAAGAGGGAAGTTTTGCAAAAACAATTGTCTCGC TGATATTGCTGGTGCTGTTCATAGCATTGAGTGCTGAACTCTACAAAGCCGGAATTGCAAAGAACACTGAGGCCTACATA TTATTTGCTGCAGCTGAGTTCATGTGGTTTTTATTGGATAGGACATGGCCAGGCTTCACCCTGGCATGTCTCGTTGGGCT TGCATGCCCGCTCGCTGAGATACCCATTATGAAGTTCTTCCACCTTTGGTACTATCCTCAAGCGAATATTGAACTCTTTG GTCAGGGGCTAGTTACTTGGACTCTCACTTGCTACTTCGTATATACGCCTTTCTTGATCAATTTGTCCCGGTGGTTGAGA ACAGTTTTTACTGCTAAAATAGAGGACTCTGCCTAA
Protein sequence (LotjaGi5g1v0242400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQYLLTPCSSSFLQPYALHHHPHLLHKVRRPGLLKPHCSQGQQSLRTTSWSQVSLSLFGTGFLFGPLIDGLHSRVNLVVY KSGSIDIGPLHTNIWVPFLLGLFYCSVGLLQLYLDERVLNKVQEGSFAKTIVSLILLVLFIALSAELYKAGIAKNTEAYI LFAAAEFMWFLLDRTWPGFTLACLVGLACPLAEIPIMKFFHLWYYPQANIELFGQGLVTWTLTCYFVYTPFLINLSRWLR TVFTAKIEDSA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 49 | 49 | - | – | |
| PANTHER | 32 | 247 | 216 | 3.5E-105 | – | |
| Phobius | 50 | 68 | 19 | - | – | |
| TMHMM | 53 | 72 | 20 | - | – | |
| Pfam | 55 | 190 | 136 | 2.2E-9 | ||
| Phobius | 69 | 93 | 25 | - | – | |
| TMHMM | 92 | 114 | 23 | - | – | |
| Phobius | 94 | 114 | 21 | - | – | |
| Phobius | 115 | 125 | 11 | - | – | |
| TMHMM | 126 | 148 | 23 | - | – | |
| Phobius | 126 | 144 | 19 | - | – | |
| Phobius | 145 | 155 | 11 | - | – | |
| Phobius | 156 | 172 | 17 | - | – | |
| TMHMM | 158 | 172 | 15 | - | – | |
| Phobius | 173 | 178 | 6 | - | – | |
| Phobius | 179 | 200 | 22 | - | – | |
| TMHMM | 179 | 201 | 23 | - | – | |
| Phobius | 201 | 211 | 11 | - | – | |
| Phobius | 212 | 233 | 22 | - | – | |
| TMHMM | 216 | 238 | 23 | - | – | |
| Phobius | 234 | 251 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0242400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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