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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0250700 |
| Transcript ID | LotjaGi5g1v0250700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial zinc maintenance protein 1, mitochondrial; TAIR: AT3G62810.1 complex 1 family protein / LVR family protein; Swiss-Prot: sp|Q0UIG9|MZM1_PHANO Mitochondrial zinc maintenance protein 1, mitochondrial; TrEMBL-Plants: tr|I3SU07|I3SU07_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0250700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:55911725..55915070) extracted from Lotus japonicus Gifu genome v1.2.
CTTAAATCCTATTGGGTTTTTTTTAATAAAAAAAGTGCAAAAAGGAGACTTAGCATAACAGCGTCGTGTCAATAGTATTG GCTACTGGTAAAGGGAACAAACACGAAGAAGAAAACGAGAGATCAGAGACCACATGAACATGGCGAGAGGCGAAGTTCTG AGCGCGTACCGCGCAGTGTTGAAAGCCACTCGGAAAACCTTCGCCGGCGACGGCGTGATGTTGAAAGGGTCTGCGGCGGA GGTGCGGAAGAAGTTCGAGGAAAACAGAAACGTCAGCTCAGAGGAAGAGATCCAGAAGCTTCTCGGAGAAGCCAGCGAGG CCTCCCATTTCATCACCAACATGCTCGTCCAGGCACAACTCAATTCCGATGCCGGCAGCTACGGTAATCTCCTCCTCCTT CTCTCTCAATGCACTCCACCTGTTTGTTAATTTGCGCCAATAGTAACATGTTCTTCCTGTTTTTTGTTTGTATTGCTTTT AATTTCATCAATACACATTCATGGATCAGTGTTAGCAATTTTCTGTTTGATGAACTTTGGATTGTACTGCAAGAGCTTCA AGTTTCTTGGTTGATAGTTGATACTTGTTCTGTGAAGAAAACCAGAATGAACCCCCATGGGAATGCTTTGAAACTCTATG GGTATCCTTTTGTGTAGCCCGCCTGTGTCTATAAGACGACTCCCTGGTTGTCCTCAAATCCTGGTTTTAGGATGGTTTTA GTCTAGGAATCAGCTTGCATTTCTACTATGAATGTATTGGGTTGATTAACTGGACTTTTGAGATGGTAGGAAGATCCCAT CTTCTTGATAGAGCATCGGCTACAGCGTTCTCCTTTCTGGGTCTATATTTGATTTCAAAATATGTCCTAATGTTAAACTT TGAAGTCAATTGATTGTTGCTGTTTGTTCCCCAATAACCTCGGATCAGCGAGTTTTTTCAAGCTCTGCTGGTCTGCCCTG ATTATATTGTAAAATGCTTGTCCATAACAATGTTGCCTCTTTTGCACTGCAAGTAAAATGGCCATCAATTTTCGTTCATA AACAGATTGATTTGGGCATGGGCAGACAATCCTTGGCTAATAAAGGCTATTATTGGTTTTTTCGTGTTACATCATAAGTC ATAACAGCTCCTAACCTTAGTCATATGCACCAGTCTTGAAAGTGAATGTTTTATCAAAATGAAGAGCAGCCACCAGTGGA GTTGTCATGGCTGCTTTAAGAGTACTGAAAGGGTGTTGAGCGTCACACTTCCATGCAAACACTTCTTAGTCTAATTTCTA CATTATGGCCTTGCAATCTTACTATAGTTCCTCACATTTTCTATGATATCCTGTCAACTCAAGGAATCCTCTTAATATCT CTTAACATCAGATGTGGTTGGCCGCTCCACCATATCTTCAAATTTTTTGGATCATCTGGTACTTCAACCGGTGATATTAT GTGACCAAGATACTACTCTTTTGCCTGCCCTTGTTTTGTTCACAAACAACTTGTTCTTCCTAAGTTTTTGGAAGGCCATT GGTAAATGATCTAAGTGTATCTACTGCCCCTTATTGTAAACAAGAATATCATTTAAAGAAGTCCAAATATAAGGTTATTT GGGATGTCTATGGTTATCTCATAAGCATATCCCGAACACAGTCATTGCAAGCAGACATTGATTATGTCTAAACATCTTAA ATTGTCTGCCTTCCTGCCATGGGCATCCTTATAGTTTTACGTTCTAATATTTTTTTGCTCCTCCTTTTTCCCCCCTTTTT GGACAGGTCAGGAATATCATCCAATTAAACTTGCATCTTAGACTAATTTCTTTTCATCTATTTTTCAAACTTATGTGCTG CAGTAATGAAGCCTGGTAAAGAGCATGCAGGAGCAACACTTGAAATTCCTACTGAAGAAATTATTAGGAAGTCTTCATGA AAAGTACGGGAGAGAAGAGGTTAGAAAAAGGTGTTTCTTCTTCTAGATTGTTTATTATTGTTAAGGAGCAATAAGAAGTG TTGGTTGTGCTTGAAGTTTTCTGCTTAGACTGCTTTTGTGGTTGTAGCTTTTTCTTTTCAATACGTTTGTTTCCTTTCAA TTTATTTAGCAGAGCGGATAGGTTATAAAGATGATGGGTAAAAGTTTATTCTACCCTTTATTGTTGTATGATTGAGTAAT GCAGCTCACCCGTTTGTTAGCTTTTTAAATTTAACTGCAGCCGAATTTCAATTGGTTTAAATAGAAATTGATCCACATTC ATTTGGATTTCGGTCCTTGTATATGGGGTGTATGTCTGTATAGTTTCTTCTTGCTATGATTTTGCTCTCCCAAAGACCAC TATGTCTTGAAAAGATTGGAACTGAACTCTAAAGCCATAATACGTAGAAAGTAGAATCTACTAGGAGTAAACAATGAAAA ACAGGGACTATTACACTATCCGAGGCTAAAACTATAGAAGAGAAAATATAGGTAGACATTCCTTCTTTGGCCGTTTGGGG TTGGTTGCTAAGGTACCCCTTGTAATTGTTGTAGGATTGTAGCTCTGACCTACTTGGTGCCCAGATACATTAAGAAAAAA AGGAAAATGCACTTGATAACTATTTTTAGTGATAATTACAATTAACTGGCTTACCCAATTAACAGATTGACAAATTCAAC AGATGAAGATGCATGTTTGGCTGAATATTTCTGGGATTGTTGACAGCTGCGTTCAGGCTAAGATGCTCAAGTAGTTGAAT TCAAATTTGGGAGCTACACATGCATTGGAACTACTTTTAAACTATAAAATTATAGATGTAGCTTGGGTCATACACAGAAA CAAGGTTCCAAGATTGGGTTTGTGAACCGAAAGCCTTCTTTCTTATGAGCAACTGCAACTAGGGACGGAACAGTCCTAGT ACAAGCTACACATACCTTTATCTGACCACTAGCTAACTATTTGTGATGGTATACAAGGTTGCCGAGAATTTGTATGGAAG AGAGAATGTTGACCTCAGCTAGTTAACATTTTGTATTTCATGGTTTTTCTGCAATGAAGTTTGTATAACACAGGAACGCC GTGCTTGTTATTACTTTGAACGAAAAATCGTAGCAAGAACCCAGCTCACACAAGCTTTGCAAATATGTCATGCAGAGTAA CTAGGTATGGACCTTTGTATCCGCTCGCCAGCACCATTCTCTAGCAATGCTGGAAGAAGCCCCAGTTATTTTACATGGAT AGGTGTAGCACTCACGGATGTAGATGCTTTGCCTTGATAGGTTTTAAGGCAAAAAGGGAAGGAAAATCGAATTGCTGCAA AGGGTTCAAAAGTCTAGCTGAGAAAGAGCATTAGTTATACTTAATTTGTCATGGTTTCAATTGACC
CDS sequence (LotjaGi5g1v0250700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACATGGCGAGAGGCGAAGTTCTGAGCGCGTACCGCGCAGTGTTGAAAGCCACTCGGAAAACCTTCGCCGGCGACGG CGTGATGTTGAAAGGGTCTGCGGCGGAGGTGCGGAAGAAGTTCGAGGAAAACAGAAACGTCAGCTCAGAGGAAGAGATCC AGAAGCTTCTCGGAGAAGCCAGCGAGGCCTCCCATTTCATCACCAACATGCTCGTCCAGGCACAACTCAATTCCGATGCC GGCAGCTACGTAATGAAGCCTGGTAAAGAGCATGCAGGAGCAACACTTGAAATTCCTACTGAAGAAATTATTAGGAAGTC TTCATGA
Protein sequence (LotjaGi5g1v0250700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNMARGEVLSAYRAVLKATRKTFAGDGVMLKGSAAEVRKKFEENRNVSSEEEIQKLLGEASEASHFITNMLVQAQLNSDA GSYVMKPGKEHAGATLEIPTEEIIRKSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 105 | 105 | 2.9E-25 | – | |
| Pfam | 7 | 62 | 56 | 9.4E-11 | ||
| Coils | 39 | 59 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0250700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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