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IPR008011 is a Complex 1 LYR protein domain.
<p>Proteins containing this domain include an accessory subunit of the higher eukaryotic NADH dehydrogenase complex. In Saccharomyces cerevisiae, the Isd11 protein ([swissprot:Q6Q560]) has been shown to play a role in Fe/S cluster biogenesis in mitochondria [[cite:PUB00033646], [cite:PUB00033647]]. We have named this family LYR after a highly conserved tripeptide motif close to the N terminus of these proteins.</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: LYR motif-containing protein 4B-like [Cicer arietinum] gi|502101823|ref|XP_004491882.1| | 2 | ||
| – | PREDICTED: succinate dehydrogenase assembly factor 1, mitochondrial-like [Cicer arietinum] gi|502159336|ref|XP_004511473.1| | 5 | ||
| – | NADH dehydrogenase [Medicago truncatula] gi|357467451|ref|XP_003604010.1| | 5 | ||
| – | PREDICTED: LYR motif-containing protein 2-like [Solanum lycopersicum] gi|460390658|ref|XP_004240945.1| | 5 | ||
| – | EMB1793 [Arabidopsis lyrata subsp]. lyrata] gi|297842345|ref|XP_002889054.1| | 4 | ||
| – | PREDICTED: mitochondrial zinc maintenance protein 1, mitochondrial-like [Cicer arietinum] gi|502117812|ref|XP_004495958.1| | 5 | ||
| – | Uncharacterized protein isoform 1 [Theobroma cacao] gi|508714953|gb|EOY06850.1| | 4 | ||
| – | Succinate dehydrogenase assembly factor 1 like, mitochondrial; TAIR: AT2G39725.1 LYR family of Fe/S cluster biogenesis protein; Swiss-Prot: sp|Q9US02|SDHF1_SCHPO Succinate dehydrogenase assembly factor 1, mitochondrial; TrEMBL-Plants: tr|I3SS71|I3SS71_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0446300 | 4 | ||
| – | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9; TAIR: AT4G34700.1 LYR family of Fe/S cluster biogenesis protein; Swiss-Prot: sp|Q945M1|NDUB9_ARATH NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9; TrEMBL-Plants: tr|I3S9X5|I3S9X5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0514800 | 5 | ||
| – | Complex 1 protein, LYR family protein; TAIR: AT1G76060.1 LYR family of Fe/S cluster biogenesis protein; Swiss-Prot: sp|C5D7M4|PGK_GEOSW Phosphoglycerate kinase; TrEMBL-Plants: tr|A0A078CAJ7|A0A078CAJ7_BRANA BnaC06g36720D protein; Found in the gene: LotjaGi5g1v0003100 | 3 | ||
| – | Mitochondrial zinc maintenance protein 1, mitochondrial; TAIR: AT3G62810.1 complex 1 family protein / LVR family protein; Swiss-Prot: sp|Q0UIG9|MZM1_PHANO Mitochondrial zinc maintenance protein 1, mitochondrial; TrEMBL-Plants: tr|I3SU07|I3SU07_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0250700 | 4 | ||
| – | Mitochondrial zinc maintenance protein 1, mitochondrial; TAIR: AT3G62810.1 complex 1 family protein / LVR family protein; Swiss-Prot: sp|Q0UIG9|MZM1_PHANO Mitochondrial zinc maintenance protein 1, mitochondrial; TrEMBL-Plants: tr|I3SU07|I3SU07_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0250700 | 4 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| PTHR46749 | PANTHER | 1 | 8.33 |