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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0251000 |
| Transcript ID | LotjaGi5g1v0251000.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-glucosidase, putative; TAIR: AT1G02850.2 beta glucosidase 11; Swiss-Prot: sp|Q8S3J3|HIUH_SOYBN Hydroxyisourate hydrolase; TrEMBL-Plants: tr|A0A0R0KZR2|A0A0R0KZR2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0251000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:55937390..55942297) extracted from Lotus japonicus Gifu genome v1.2.
TTCTATGGACCTTCGCGATGCCTGGTTGGTTGTCTTCCCACATATAAATATACTTTTATCCTTTATCCACAAACAGTCAA ATACACTGCAAATCAAACGCCATTGAATTGTGAGCATGATGAGTTGAGTACATATATAGGAGCCAGAAACAGCAACATAG AAGATGGAACCAGAAACATCTTCAAGGCTTGTTTTGTTGCTCACTGTCATGCTTCTGAACTTGGCTGTGGGAGCTCTCAG TACTGCAGATAACTATAGCAGATCTGACTTCCCACTTGACTTTATCTTTGGTTCAGGCACAGCTGCTTACCAGGTTCCTC CCTCTTTACTCAATTAGTGTCAAAAAGCTTAGTTGTCATTTGACTTACACAACTGTTGCTGTGCATTGTAGCTTCAATGG TCGAAGAAAATGAGATGAATAGTCTTGGCATTTCTAAAATAACATTTTTGTAAAGGTAAAACTAAAACAATAAAAAGATC AAGAAATTGTAGTATCTAAAACTTACCAATAAATTCCTTTACTTATCCAACAAGGTTCATTTAGGAAAATTAATATAATT TGAAGATAAATTTGGGAATAGGCCTAGCAAATAGTTTTAAGTTTTAACTAGTGTTATTAATAGCGGATCACGGAAATAGC AGAAAGCCAAAAACCCGCTATTTCAAGCCCTCATAACGGAAAATAGTGGAAGATAAGATTATAACCGCCATTTGATACGG GTTTGAACTAGTAAATAAGAAGACTAAATTATAAAACAATGGTTGGTTCAAAAAAAGATTATAAAACAATGGTCACCCAC TCAAGAGACGAAGAGCCGTCAACATTAATAAAATTTCAACAATTAGGTGTTCCTTTTGTCTCACTTGATAGATTAGAGGA TGTTTGACAATGACATCCTCTGCTTTCTACTTTAGTATGTAATAAATATTGAAGTGATGGTTGAGGTGCTCACTGAAAAG TCTTATGATGGAACCACACAAATTTTGGGCCCTTGCTTTCATACTTGTGAAATTAGGTGTAGGAATTTTGTGTGCTGATG ATCAGTACAATAGGGATAACTTCCCAGTTGATTTTATTTTTGGTTCAGCCACCTCTGCTTATCAGGTTCCTATTTTATGA TCTGCTTGCAACCAATTCATCTTAGCATATATATCGTGATTATGGAGCAAAGATGAACTTATATGTGTAATGTGTATTAT TGTTATTGTTATTATTAATCATTATATACATGGTCATGAACAGGTGGAAGGTGCTGCTAATGAAGATGGAAGAACTCCTA GCATCTGGGATACATTTGCTTATGCTGGTTCCTACCTACCTTCTTTTTTTTCCATCTTACTAAATCTTGTTGAGTTTGGA AGATTACTTAATAAGTTGATTTCTCCAAAGTAACCGATATGATATCATTTTTAATGAACAGGGTATGCGCATGGAGAAAA TGGAGATGTAGCTTGTGATGGTTACCACAAATATAAGGTTATTACAGTACACCTCAATTTTATTTGCCTGTTAGTGCTTT TCCTTGTGGTTCACTCATTTGGAGAAAATTAAAGAAAAATGTTAGCATAAGCTGCTCAAACTATACAAACTGTAATCAGT ATGTTAGTTTTAGTGCTAAAGTGTCAATATGATACAGTGTTTCCCCCAAAATATACAATGCAGGAAGATGTGCAGCTCAT GGTGGAAACAGGCCTTGATGCCTATAGATTTTCCATTTCTTGGTCAAGGCTGATACCAAGTATTTTACAAAACTCAAACT TGTGCACAAATAGAGAACCATTAAATTTTTAAGGATTTCAATCTCTTTGTCCAGGAAAATCTTTGTCAATGCACTGTTGA AAATGCTTTTCTTTCTCCCCAGATGGTAGAGGGCCTGTCAATCCCAAAGGATTACAGTACTACAACAATCTCATCAATGA ACTCATCGCCAATGGTTAAACTTAAATATGACTTTCTTGATTACACCATGGCCCATGCCTTTAAGATTCTGCTTCTTCAA CTGATATGATACACTATTTCCCTTGAGCAGGAATCCAACCACATGTCACACTGCACAACTTTGATTTTCCACAGGCACTT GAAGATGAATATGAAGGATGGGTCAGTCGTGACATCATGTATGTTCCTGATCTCTTGCACCAAAATACTGTTTAAACTAA TTCATTAAACTTCCATTGCACCAGTAACTTTCCAAAAACAAGGCACTAACTAATGCAATTAGTCTGTGCATGTTTACTTG TGCTTACTATTCAATCTCATTATGGTGAAATATTGATGGACAAATAACTTGGATGTGGATGCAGAAGAGACTTCACAGAC TATGCGGATGTGTGTTTTAGAGAGTTTGGTGATAGAGTCTTGTACTGGACTACTGTGAATGAGCCCAATGTGTTCGCGTT GGGTGGTTATGATCAGGGAAATGCCCCACCTCGTCGCTGTTCTGCCCCATTTTGTGCTCCAAGTAACAGCACTAAGGGCA ACTCAACATATGAGCCCTACTTGGTAGTTCATCATATTTTGTTAGCTCATTCTTCAGCTGCGAGATTATACAAGAGGAAA TATAAGGTATGTGCTATCATCTAATCTTTTTTCCTTATATTATGCATTTTCGAGTCATGACTTTCTATATGTCCAATGGC AAATGCTCCGACTTTGTTGTGGAAAAATATTCTTGATTTCATTGACTGTTAAGTGACTTTCAGGACCAACAACATGGATT TGTTGGTATCACTGTCTACACTTTTGGGTGTTCCCCTTTAACAAATACAGAAGAAGACAGGGTAGCAGCTCAAAGAGTCC GAGACTTCATGGTTGGTTGGTGAGTTACAGTCCCTACGTTCTTCTCCAAGTGCTCTTTATATGCTCTCTTTACAGAAGAG AATATCCTCACTTCAGTTACTTATTAGCCTACAATTGGAATTGCAAGTTGCAACATGTTTGTTTGATCTCAACTTAGAGC CTGTACATGTAAATCCATGATTCCATTTTCAATAAACTATCTGGTATCTACCCTTCGAGGCCTTTCCTGTTAAGTCTAGG TGATGGCTATGAATCAATGTGAAGAATGTTGTTGTTTATATGAACTCTTTACTGCAGGATTATGGAACCCTTGATGCATG GAGACTATCCCATTTCCATGAAGAGAAATGCAGGGGCAAGAATTCCAGCCTTCACAAGTCATGAATCAGAACAGGTTAAG GGTTCATCTGACTTTATAGGTGTAATTCACTATACCAATGTTATTATTACAGACAATTCTGAGGTCCTGAACATCAAACT GAGAGATTACAGTACAGACATGGCTGCAAAGATCCGTAAGTACTTAGTTAACTTTAAGGATGGTGAGTTAGTGCATGTTT GGAAATCCTTCTACAATCGATTCGAAAGCCAAAATCAATGAGAAGCTGATGTGAGTAATTTTTGGGTCTCAGAATTGATT ATGGAGAAGGAGATCCAAACATGTATTTACTATTTAGTCAAAGGATAAAATTGGTAGTATAATCTTAATATTGTCGTTGC ATACACACAATTTTTTACATTTTGTTTGTGAAATTTCCAATCTCACATCATTTAGCACCTCACTAATATGAGCACCATCA TGTGCATAACTCGTTTCTGAATAATTGGTGAGGCAAGGTGATCATACTCATTGCTTTCCTGGTTTTGACAGAGGGACTTG ACCTGCTTGGAAATGAAGAGGTAACAGCTCAAAAATTATTTCTCCAAATCAATTGGTTAAACTTTACAGTAGATAACAGT TTACTTACAAGCTTTACTTGATTCAGTACCCTTTAACTCCATGGGGTTTACGCGAAGAACTCAATAAATTCAAGGTCCTT TATGGCAATCCTCCACTGTTCGTTTATGAAAATGGTCTCTCTCTCTCTCTCTCTAAAGCAACTTGATAGCATCAAACAAT AACATTTAAGTGTGTGTTTGTATAATAGCATGTCTGAATCAACTTATTATTCCTCAAAATCACTTTTGGCACTTAGAAGT TATTCACATAAACTTTTTTCCATAATTGATTTTGGCTTTAAAACCAATTGTAAAAGGATTTCCAATCATACACTAAAAGT TAGTGTCGCAACAAAAGAACCTTTAGCCAACAGAAGGACAGAGTTCCTTCAACATTTACTCTTGGAAAGCATTTGAAAGC TGGTTAACTCTAGAGTAAACTCTTTTAGAAACATTGCCTAAATATATCATGTTCATTCTTGCTTATAATATTTTTCCCTG TTTACTAATTCATGTAGCCAATGTTGTCAGTAGGTTATGGCATGGTACATTAAGAATTTAAGACTGTATTTTCCAATATA TGAGTGAGCATGCATCTTTGGTTGTATGGAATTAAAAACTGAAGCCTACATGCATTTTTAGTAGAGATTTAGTGCAGTAC TTATGAAGTTATGATACAAGCTGTCAATGGTAAACTAGTTAGTCCTATGATGACATGTAACTGCAAAATGCTACTGTTAT ATAATCAGTTTAAAGGAGTTGTGTTACTAATCAAATTTTGGCATTGTGTTGTTAATCAGGTCAACGGACAGCAAGCAATT CGTCACTTCATGACTTGTCAAGGGTAAAATACTTGCATGGATACATTGGTGCCACACTTGATGCCTTGAGGTATGCTGCC CCGTTATAATTCATCTCATTCATGCACATCACAACTGATTAATATTATTTTTTATCACTTCTGCAAGATGTCCCACAGCT CATGAACTAAAGCATGCTTGGATCAATTTATTTTTCCACGGAATCATTTCGGACTACCAGAAGCTACTCACATAAGCTTC ACCTTAGAATTGATTTTAGTTTTTGAATTAATTGTAGAATGATTTCCAATGATACTGATATATGAAATACTTGTAGAAGT TTTTGTATTAATTGATTTTCGTTTTCAA
CDS sequence (LotjaGi5g1v0251000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACCAGAAACATCTTCAAGGCTTGTTTTGTTGCTCACTGTCATGCTTCTGAACTTGGCTGTGGGAGCTCTCAGTAC TGCAGATAACTATAGCAGATCTGACTTCCCACTTGACTTTATCTTTGGTTCAGGCACAGCTGCTTACCAGGTGGAAGGTG CTGCTAATGAAGATGGAAGAACTCCTAGCATCTGGGATACATTTGCTTATGCTGGGTATGCGCATGGAGAAAATGGAGAT GTAGCTTGTGATGGTTACCACAAATATAAGGAAGATGTGCAGCTCATGGTGGAAACAGGCCTTGATGCCTATAGATTTTC CATTTCTTGGTCAAGGCTGATACCAAATGGTAGAGGGCCTGTCAATCCCAAAGGATTACAGTACTACAACAATCTCATCA ATGAACTCATCGCCAATGGAATCCAACCACATGTCACACTGCACAACTTTGATTTTCCACAGGCACTTGAAGATGAATAT GAAGGATGGGTCAGTCGTGACATCATAAGAGACTTCACAGACTATGCGGATGTGTGTTTTAGAGAGTTTGGTGATAGAGT CTTGTACTGGACTACTGTGAATGAGCCCAATGTGTTCGCGTTGGGTGGTTATGATCAGGGAAATGCCCCACCTCGTCGCT GTTCTGCCCCATTTTGTGCTCCAAGTAACAGCACTAAGGGCAACTCAACATATGAGCCCTACTTGGTAGTTCATCATATT TTGTTAGCTCATTCTTCAGCTGCGAGATTATACAAGAGGAAATATAAGGACCAACAACATGGATTTGTTGGTATCACTGT CTACACTTTTGGGTGTTCCCCTTTAACAAATACAGAAGAAGACAGGGTAGCAGCTCAAAGAGTCCGAGACTTCATGGTTG GTTGGATTATGGAACCCTTGATGCATGGAGACTATCCCATTTCCATGAAGAGAAATGCAGGGGCAAGAATTCCAGCCTTC ACAAGTCATGAATCAGAACAGGTTAAGGGTTCATCTGACTTTATAGGTGTAATTCACTATACCAATGTTATTATTACAGA CAATTCTGAGGTCCTGAACATCAAACTGAGAGATTACAGTACAGACATGGCTGCAAAGATCCAGGGACTTGACCTGCTTG GAAATGAAGAGTACCCTTTAACTCCATGGGGTTTACGCGAAGAACTCAATAAATTCAAGGTCCTTTATGGCAATCCTCCA CTGTTCGTTTATGAAAATGGTCAACGGACAGCAAGCAATTCGTCACTTCATGACTTGTCAAGGGTAAAATACTTGCATGG ATACATTGGTGCCACACTTGATGCCTTGAGATGTCCCACAGCTCATGAACTAAAGCATGCTTGGATCAATTTATTTTTCC ACGGAATCATTTCGGACTACCAGAAGCTACTCACATAA
Protein sequence (LotjaGi5g1v0251000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEPETSSRLVLLLTVMLLNLAVGALSTADNYSRSDFPLDFIFGSGTAAYQVEGAANEDGRTPSIWDTFAYAGYAHGENGD VACDGYHKYKEDVQLMVETGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELIANGIQPHVTLHNFDFPQALEDEY EGWVSRDIIRDFTDYADVCFREFGDRVLYWTTVNEPNVFALGGYDQGNAPPRRCSAPFCAPSNSTKGNSTYEPYLVVHHI LLAHSSAARLYKRKYKDQQHGFVGITVYTFGCSPLTNTEEDRVAAQRVRDFMVGWIMEPLMHGDYPISMKRNAGARIPAF TSHESEQVKGSSDFIGVIHYTNVIITDNSEVLNIKLRDYSTDMAAKIQGLDLLGNEEYPLTPWGLREELNKFKVLYGNPP LFVYENGQRTASNSSLHDLSRVKYLHGYIGATLDALRCPTAHELKHAWINLFFHGIISDYQKLLT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 8 | 8 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 9 | 18 | 10 | - | – | |
| TMHMM | 9 | 28 | 20 | - | – | |
| PANTHER | 16 | 437 | 422 | 5.7E-206 | – | |
| PANTHER | 16 | 437 | 422 | 5.7E-206 | ||
| Gene3D | 19 | 445 | 427 | 1.6E-160 | – | |
| Phobius | 19 | 23 | 5 | - | – | |
| Phobius | 24 | 465 | 442 | - | – | |
| SUPERFAMILY | 27 | 437 | 411 | 3.3E-134 | ||
| Pfam | 34 | 436 | 403 | 2.7E-114 | ||
| ProSitePatterns | 40 | 54 | 15 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi5g1v0251000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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