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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0253800 |
| Transcript ID | LotjaGi5g1v0253800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peroxidase; TAIR: AT1G24110.1 Peroxidase superfamily protein; Swiss-Prot: sp|O48677|PER6_ARATH Peroxidase 6; TrEMBL-Plants: tr|I1NHR7|I1NHR7_SOYBN Peroxidase; Found in the gene: LotjaGi5g1v0253800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:56270450..56273018) extracted from Lotus japonicus Gifu genome v1.2.
ATGACACTCACTCTTCCCTGTTTCAACAATGAATCCTTGCCTTCATGATTTCAATTTGAGCTTGAGATTCCAAAAATAGC ATGCAAAAGAACTCCATTGACCAAGCAAAAGAGAAAAGAACCAAATTGAACATGCAAAAATAGCACACACCATAAAACCA ACCAATGAATTGAAATTTGAAGTCACAAAAACATAACAAAAAAAGCTCCTTAAACCCCTCCCTTCCACACCATTTCCTCC CATTTTCCCTCCAAACTTAGCAATCTTCTTATGCATTCCCCTCTTATCCATCCCAAAGGTGTTCTCATTTTCTTTCCAAA GCCAACCCAAGAGAGGAAGATCATAAACAGGTCTCTTCTTCCCTCTTGACCCTTCTCTTTGTGAGAGTAGTGAGTCATTT TTTTCTATTTTCCTTCCCTTCAATTTCCATCATGGCTTCCCCTTTCCCTTTACCAATCCTCTTCCTCCTCTTCCTCTCCA TCCCTTTCTCCTCCGCCAAGCTCAACGTGGACTACTACAAGAAAACATGCCCTGACTTCAACAGAATCGTCACTGAACAA GTCTTCAACAAACAAAGCACCAGCCCCACCACCGCCCCTGGCATCCTCCGCCTCTTCTTCCATGACTGTATCTCCGGCGG CTGTGACGCTTCCCTTCTCGTCACCTCCACCGCCTACAACCCCCATGCAGAGAGAGACTCTGAGTCTAACCTCTCCCTCT CCGGTGACGCCTTCGACATTATCCAGAAAATCAAGAATGCTCTGGAGCTAGCATGCCCTGGTGTTGTGTCCTGCTCTGAC ATTATAGCTCAGGCCACAAGGGACCTTGTGAAAATGGTGGGTGGACCCTATTACAATGTGAGGCTTGGGAGGAAGGATAG CCTTATCTCTGATGGTTCAAGAATTGAATCAAATCTTCCAAACCAGTACATGAACATGGATCAGATCATCGAAAAGTTCA CCTCAAAGGGTTTGACTATCAAAGAGATGGTGGCTCTCACTGGTGCACACACCATTGGTTTCACTCACTGCAAGGAATTC AGCAACAGGATCTTCAACTTCAGCAAGACCACTGAGGTTGACCCTACCATGCACCCAAAGCTTGCTGCAGGGTTGAGGAA GGTAAATTGAGACTAAATTGCTACATATTATTGTGGATTGAAATTTTCCAGTGTCTCATTTCTCGTCCCATCGATAAAAT TGTGTGTCATGTCAATTAGAAAAGGTTATGTCAAATTGTCAATTGAAAAAAGTTAATGAATACAATTATTATAACCTCAC ATGGATGACTTTTAAATGACATGACACAATTTTACTGGCGTTACAAATAATAAGACATGAAATAGATAAAAATGTAGACT CTATCACCTAATAAGTTTCCAATAATTATGCTAATTAATGGAAATTACCAATAACTAAGGTAAAATATCTCAGATACAAG TTATAGTTATGTCATGAACTAATTGTACAAGAAACTTAAGTTGTTGGGTATATTTCATCTATAATGTGAATAAATTCAAA TTTTTTTATTAGAAACGAACTTTAAATCATTTGGTTACAGAGACATTAATAGAATAAATTATCTCAAAAGCTTAATTATT GAATAAATGAGACATGAGAGATTTACATTATATTTCTAACATGATAATAAATAAGCTAGCACACAAATACAGATAATCAG TATCTAATCCCAATATAGGAAGAAACTAGGAAACAAATAATAGGACAATAGAAAACAAATCATACAAAATATACACAATG ATATCCTCTATGGTATTGCAGATTTGCCAGAATTACACCCATGACCCTACAATGGCAGCATTCAATGATGTGAGGTCACC AGGGAAATTCGACAATGCATTCTTCCAGAATGTGCTCAAAGGGGTGGTGCTAATGTCCTCTGATGCTATTCTTGCTTCGG ACCCAAGGACAAGGCCAATTGTGGAGCTCTATGCAAAAGATGAGCAAGCATTCTTCCATGACTTTGCAAAAGCAATGGAG AAGCTTTCTGTGCATGGTGTGAAGACTGGGAAGAAAGGAGAAGTGAGGAGTAGGTGTGACCAGTTCAACCACATTCCTGC TTCTGCATAGAGGACAAATTGATAATTAATAATATTAAAAGAAAAAATTCAGTGAACTTTCCTTTATTTGAATTCTTGTA ATGTTGGTTTCCTTTTGATGTTTTTGTTTTCTGGAGAAGAAGAAAAGGAGAAAGTTTTATAGGGCTTGTGAGGGAAAATG CAGTTTTACCCCCCATTCAAAAATTTGTGCTCTGGTGTTCCTATTAATTTGTTGATGGATAAACTATATATATGCAATAA GTGTCTCATTGGAAAGTTCAGCACCTTGTATTTAGATATTGTTTGTGTATATTACCACACCTCTTGTAGTTTTTATATGC TGCATGGGAGGAAGAAGAGTAAAATAAACAATTTACATTGTGCTGATCTGATATTGTCCAAACTCAGATTGAAGGAATAG CCAGAGTAACATATTTTCAACAAGAAATTAATGACATATTCTTAAACATGCTATGTGGTAAATATATTGGTAAGTTCTGT GGTACCCAT
CDS sequence (LotjaGi5g1v0253800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCCCCTTTCCCTTTACCAATCCTCTTCCTCCTCTTCCTCTCCATCCCTTTCTCCTCCGCCAAGCTCAACGTGGA CTACTACAAGAAAACATGCCCTGACTTCAACAGAATCGTCACTGAACAAGTCTTCAACAAACAAAGCACCAGCCCCACCA CCGCCCCTGGCATCCTCCGCCTCTTCTTCCATGACTGTATCTCCGGCGGCTGTGACGCTTCCCTTCTCGTCACCTCCACC GCCTACAACCCCCATGCAGAGAGAGACTCTGAGTCTAACCTCTCCCTCTCCGGTGACGCCTTCGACATTATCCAGAAAAT CAAGAATGCTCTGGAGCTAGCATGCCCTGGTGTTGTGTCCTGCTCTGACATTATAGCTCAGGCCACAAGGGACCTTGTGA AAATGGTGGGTGGACCCTATTACAATGTGAGGCTTGGGAGGAAGGATAGCCTTATCTCTGATGGTTCAAGAATTGAATCA AATCTTCCAAACCAGTACATGAACATGGATCAGATCATCGAAAAGTTCACCTCAAAGGGTTTGACTATCAAAGAGATGGT GGCTCTCACTGGTGCACACACCATTGGTTTCACTCACTGCAAGGAATTCAGCAACAGGATCTTCAACTTCAGCAAGACCA CTGAGGTTGACCCTACCATGCACCCAAAGCTTGCTGCAGGGTTGAGGAAGATTTGCCAGAATTACACCCATGACCCTACA ATGGCAGCATTCAATGATGTGAGGTCACCAGGGAAATTCGACAATGCATTCTTCCAGAATGTGCTCAAAGGGGTGGTGCT AATGTCCTCTGATGCTATTCTTGCTTCGGACCCAAGGACAAGGCCAATTGTGGAGCTCTATGCAAAAGATGAGCAAGCAT TCTTCCATGACTTTGCAAAAGCAATGGAGAAGCTTTCTGTGCATGGTGTGAAGACTGGGAAGAAAGGAGAAGTGAGGAGT AGGTGTGACCAGTTCAACCACATTCCTGCTTCTGCATAG
Protein sequence (LotjaGi5g1v0253800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASPFPLPILFLLFLSIPFSSAKLNVDYYKKTCPDFNRIVTEQVFNKQSTSPTTAPGILRLFFHDCISGGCDASLLVTST AYNPHAERDSESNLSLSGDAFDIIQKIKNALELACPGVVSCSDIIAQATRDLVKMVGGPYYNVRLGRKDSLISDGSRIES NLPNQYMNMDQIIEKFTSKGLTIKEMVALTGAHTIGFTHCKEFSNRIFNFSKTTEVDPTMHPKLAAGLRKICQNYTHDPT MAAFNDVRSPGKFDNAFFQNVLKGVVLMSSDAILASDPRTRPIVELYAKDEQAFFHDFAKAMEKLSVHGVKTGKKGEVRS RCDQFNHIPASA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 22 | 22 | - | – | |
| Phobius | 7 | 17 | 11 | - | – | |
| PANTHER | 9 | 328 | 320 | 5.8E-163 | – | |
| PANTHER | 9 | 328 | 320 | 5.8E-163 | – | |
| Phobius | 18 | 22 | 5 | - | – | |
| CDD | 23 | 325 | 303 | 2.21828E-153 | ||
| ProSiteProfiles | 23 | 326 | 304 | 71.554 | ||
| Phobius | 23 | 332 | 310 | - | – | |
| SUPERFAMILY | 24 | 326 | 303 | 7.07E-97 | ||
| Gene3D | 27 | 326 | 300 | 1.3E-105 | – | |
| PRINTS | 33 | 52 | 20 | 4.1E-39 | ||
| Pfam | 44 | 290 | 247 | 7.2E-70 | ||
| PRINTS | 55 | 69 | 15 | 3.2E-26 | ||
| ProSitePatterns | 55 | 66 | 12 | - | ||
| PRINTS | 57 | 77 | 21 | 4.1E-39 | ||
| PRINTS | 99 | 112 | 14 | 4.1E-39 | ||
| PRINTS | 118 | 128 | 11 | 4.1E-39 | ||
| PRINTS | 119 | 136 | 18 | 3.2E-26 | ||
| PRINTS | 137 | 152 | 16 | 4.1E-39 | ||
| PRINTS | 137 | 149 | 13 | 3.2E-26 | ||
| Gene3D | 163 | 305 | 143 | 1.3E-105 | – | |
| PRINTS | 184 | 196 | 13 | 4.1E-39 | ||
| PRINTS | 185 | 200 | 16 | 3.2E-26 | ||
| ProSitePatterns | 185 | 195 | 11 | - | ||
| PRINTS | 244 | 259 | 16 | 4.1E-39 | ||
| PRINTS | 246 | 261 | 16 | 3.2E-26 | ||
| PRINTS | 260 | 277 | 18 | 4.1E-39 | ||
| PRINTS | 300 | 313 | 14 | 4.1E-39 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Biological process | Response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Hydrogen peroxide catabolic process | The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2). | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi5g1v0253800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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