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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0256700 |
| Transcript ID | LotjaGi5g1v0256700.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial carrier protein; TAIR: AT1G14140.1 Mitochondrial substrate carrier family protein; Swiss-Prot: sp|Q9XI74|PUMP3_ARATH Mitochondrial uncoupling protein 3; TrEMBL-Plants: tr|I3T406|I3T406_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0256700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:56542874..56545477) extracted from Lotus japonicus Gifu genome v1.2.
AATGAATTTTTTTTCCGGTTATTTCTCGACATTGCTACAATAGAACGAGTACGCATGAGTTAGATTGTCTCACCATCTCC ACACACCACGGGTCCAATTGTCTCAGGTAATTCTGTATCTTATTTCGGAATCCATCATACTTGATTATTGTTAAATTTGT TGATGTGATGTGATGTGTGGAAATTCGATATAAGCTTCACTTTGATTTTTAATATGCTATTTATTCAGATATTGGAGGAA ATTTGTAGCTTGATTTATGATTCTCTCAATGTGTAGTAGGAATCATCATAGCCCAATTTCATTTTTCATATAATTTGGGT CATTCTTGTATGTAGTAGTACCCATGAAATCATCAGGCCATCAACATGGTGGAGTTGATAACACTCCCACAAAGCTTGTA CTGACATCACTGTCAGCAATGGTAGCTGAGACCACAACTTTCCCCATAGACCTCATCAAGACCAGGCTCCAACTCCACGG CGAGTCGCTTTCCTCGAGTCGTTCTACCGGTGCGTTTCGAATAGGTTTGCACATTGTTCGCGAACAAGGGACCCTTGGCC TTTACAAGGGCCTGTCTCCAGCAATTGTCAGACACCTACTCTACACGCCTTTTCGGATCGTTGGATATGAGCACCTGAGG AGTGTTGTTTCTGATGATAACGGGTCACTGTTTATCGTTGGCAAGGCTTTTGTTGGTGGAATCTCTGGTAGCTTGGCTCA GGTGAGAACTGTGTGGTCTGGGAATGTGGTTTATATTTCTGCAGAAAATTCTTGTCAATTTAGTCTTTTCTTTCAATGGA TGTAAGCGGAAACTTTGGTAATTGGTAGCTTATCGATTAAAAATGTTACCCATCAATGTTATAGTTAAAGGATAAGAATC TAAGAATATATAGTTACAGCCTCTTGATTCTGAATTCTATTAATGAGATGTTCAATGATAGAACTTTATGCCTTCGAAGA ACACCATCGCAAGATTTTTAGACTCATCAGTTCTCAGTGTTATACGATTGATTGATATGGTATCAGATGTAGCATGGCTT TTGTTGGTTTTTTTTACTGATGTTGATATTAGTTACTAGAATTTTAAGCCTAATTGGACTATCTAGGAGACTAATCAGGT TTATACATTGCATCGGCCTTGTCTTGGTCCTGGTTATGCATGTTTCTGGTTTGTCCTCTGACAGTTCCCCTCAAGCTTAA AGTATACTAAGCTAAACATAAGACAAATAACACCGCCCACCTCAACCAAGTAACTTCAGTAACTAAAAGCCTTTTAGAAA GGGAAAGAGATTCATGTATTGAACTAATAGGAAATCTTTCAAATTTTCCCACCCCAGTTGGAGAGGTAGAAGCAAAAGAA TAGGATGATGCTTTCAGCAGTTAGATACAAAAGTAGACTTTAGATACTAATGGATAAACAAATATCAAAGATAAATGAAG AAATATCTTGTTAGCATTATGTTAAAATAGGAAATCTTTCAAATATTCACACCCTGCAGACAGTAAAATGTTTTTTTTCT TCTTCGAGTAATCACTGTTTTATCCAGAAGGTTTTAATTAACGGCTCACTATTATTTATTTTTCTTTGAAAGTTACAATG TTCTATTATTTACTCTTAGTGGTACAGATTGTAGCAAGCCCGGCTGATCTTGTCAAGGTGAGGATGCAAGCTGATGGCCG AATGGTGAGCCAAGGTCTTCAACCTCGGTATTCAGGGCTATTTGATGCTTTCAACAAAATTGTTCAAGCTGAAGGGTTAC AAGGACTATGGAAGGGTGTTTTTCCTAACATCCAAAGAGCCTTTTTAGTGAATATGGGAGAATTAGCCTGTTATGATCAT GCTAAACAAATTGTTATTAAAAGTAAAATAGCTGAGGATAACGTTTATGCCCACACATTAGCTTCCATCATGTCAGGTCT CGCAGCAACTTCTTTAAGTTGTCCAGCTGATGTTGTGAAGACTAGAATGATGAATCAGGCAGATAAAAAGGAGGGGAAAC TCTTATATAACAGCTCTTATGATTGCCTGGTAAAGACTGTTAAACTTGAAGGAATAAGAGCACTGTGGAAAGGGTTCTTC CCCACATGGGCAAGGCTTGGCCCATGGCAATTTGTGTTCTGGGTTTCGTATGAGAAGTTAAGAAAAGTTGCAGGGCTCTC TTCTTTCTAATATAATTTTTTATTTATACTGTGAGACATTCATTCATGATAAATTTACAATCCACATCTTCCAGAGTACA CAACCTTATACTATAATTTGGAAGCCTTTCTGTAGGTATGTTTCCACCAAGTTCTACTTCTTTTCGACATTTTATTTATA TTGCTATTATTCCCCTTAAGTTCCACCTCCCACAATGTTTGACATCTTTCACCTCCACCACCATTGGGCATCATTCACCA CCACCATTGCTATTATTCCTAAGTTCCACCTCCACATGATAAGTTCCACTAGTGATGGTTTAGGCTGTCAGGTTGCAATG GAGGTGGAGTTTCGTGTGACGGTGTTGAGCAGTGGTGATGAAGGGTGCTTGGTGATAGTGATTGTAGTGGAAGGTGCCTA GCGGCAAGGGTGTTGTATGCCAATGATGGTTGATGGTGTGCGGC
CDS sequence (LotjaGi5g1v0256700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAAGCTGATGGCCGAATGGTGAGCCAAGGTCTTCAACCTCGGTATTCAGGGCTATTTGATGCTTTCAACAAAATTGT TCAAGCTGAAGGGTTACAAGGACTATGGAAGGGTGTTTTTCCTAACATCCAAAGAGCCTTTTTAGTGAATATGGGAGAAT TAGCCTGTTATGATCATGCTAAACAAATTGTTATTAAAAGTAAAATAGCTGAGGATAACGTTTATGCCCACACATTAGCT TCCATCATGTCAGGTCTCGCAGCAACTTCTTTAAGTTGTCCAGCTGATGTTGTGAAGACTAGAATGATGAATCAGGCAGA TAAAAAGGAGGGGAAACTCTTATATAACAGCTCTTATGATTGCCTGGTAAAGACTGTTAAACTTGAAGGAATAAGAGCAC TGTGGAAAGGGTTCTTCCCCACATGGGCAAGGCTTGGCCCATGGCAATTTGTGTTCTGGGTTTCGTATGAGAAGTTAAGA AAAGTTGCAGGGCTCTCTTCTTTCTAA
Protein sequence (LotjaGi5g1v0256700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQADGRMVSQGLQPRYSGLFDAFNKIVQAEGLQGLWKGVFPNIQRAFLVNMGELACYDHAKQIVIKSKIAEDNVYAHTLA SIMSGLAATSLSCPADVVKTRMMNQADKKEGKLLYNSSYDCLVKTVKLEGIRALWKGFFPTWARLGPWQFVFWVSYEKLR KVAGLSSF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 168 | 168 | 1.4E-85 | – | |
| PANTHER | 1 | 168 | 168 | 1.4E-85 | – | |
| Gene3D | 1 | 166 | 166 | 4.0E-52 | ||
| ProSiteProfiles | 1 | 63 | 63 | 17.729 | ||
| SUPERFAMILY | 2 | 159 | 158 | 1.7E-42 | ||
| Pfam | 9 | 67 | 59 | 2.0E-10 | ||
| PRINTS | 26 | 43 | 18 | 3.0E-7 | ||
| PRINTS | 69 | 87 | 19 | 3.0E-7 | ||
| ProSiteProfiles | 72 | 162 | 91 | 26.224 | ||
| Pfam | 73 | 162 | 90 | 9.4E-22 | ||
| PRINTS | 151 | 168 | 18 | 3.0E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Mitochondrial transport | Transport of substances into, out of or within a mitochondrion. | ||
| Cellular component | Mitochondrial membrane | Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope. |
Expression pattern of LotjaGi5g1v0256700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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