Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0256700 |
| Transcript ID | LotjaGi5g1v0256700.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial carrier protein; TAIR: AT1G14140.1 Mitochondrial substrate carrier family protein; Swiss-Prot: sp|Q9XI74|PUMP3_ARATH Mitochondrial uncoupling protein 3; TrEMBL-Plants: tr|I3T406|I3T406_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0256700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:56543217..56545043) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAATCATCAGGCCATCAACATGGTGGAGTTGATAACACTCCCACAAAGCTTGTACTGACATCACTGTCAGCAATGGT AGCTGAGACCACAACTTTCCCCATAGACCTCATCAAGACCAGGCTCCAACTCCACGGCGAGTCGCTTTCCTCGAGTCGTT CTACCGGTGCGTTTCGAATAGGTTTGCACATTGTTCGCGAACAAGGGACCCTTGGCCTTTACAAGGGCCTGTCTCCAGCA ATTGTCAGACACCTACTCTACACGCCTTTTCGGATCGTTGGATATGAGCACCTGAGGAGTGTTGTTTCTGATGATAACGG GTCACTGTTTATCGTTGGCAAGGCTTTTGTTGGTGGAATCTCTGGTAGCTTGGCTCAGGTGAGAACTGTGTGGTCTGGGA ATGTGGTTTATATTTCTGCAGAAAATTCTTGTCAATTTAGTCTTTTCTTTCAATGGATGTAAGCGGAAACTTTGGTAATT GGTAGCTTATCGATTAAAAATGTTACCCATCAATGTTATAGTTAAAGGATAAGAATCTAAGAATATATAGTTACAGCCTC TTGATTCTGAATTCTATTAATGAGATGTTCAATGATAGAACTTTATGCCTTCGAAGAACACCATCGCAAGATTTTTAGAC TCATCAGTTCTCAGTGTTATACGATTGATTGATATGGTATCAGATGTAGCATGGCTTTTGTTGGTTTTTTTTACTGATGT TGATATTAGTTACTAGAATTTTAAGCCTAATTGGACTATCTAGGAGACTAATCAGGTTTATACATTGCATCGGCCTTGTC TTGGTCCTGGTTATGCATGTTTCTGGTTTGTCCTCTGACAGTTCCCCTCAAGCTTAAAGTATACTAAGCTAAACATAAGA CAAATAACACCGCCCACCTCAACCAAGTAACTTCAGTAACTAAAAGCCTTTTAGAAAGGGAAAGAGATTCATGTATTGAA CTAATAGGAAATCTTTCAAATTTTCCCACCCCAGTTGGAGAGGTAGAAGCAAAAGAATAGGATGATGCTTTCAGCAGTTA GATACAAAAGTAGACTTTAGATACTAATGGATAAACAAATATCAAAGATAAATGAAGAAATATCTTGTTAGCATTATGTT AAAATAGGAAATCTTTCAAATATTCACACCCTGCAGACAGTAAAATGTTTTTTTTCTTCTTCGAGTAATCACTGTTTTAT CCAGAAGGTTTTAATTAACGGCTCACTATTATTTATTTTTCTTTGAAAGTTACAATGTTCTATTATTTACTCTTAGTGGT ACAGATTGTAGCAAGCCCGGCTGATCTTGTCAAGGTGAGGATGCAAGCTGATGGCCGAATGGTGAGCCAAGGTCTTCAAC CTCGGTATTCAGGGCTATTTGATGCTTTCAACAAAATTGTTCAAGCTGAAGGGTTACAAGGACTATGGAAGGGTGTTTTT CCTAACATCCAAAGAGCCTTTTTAGTGAATATGGGAGAATTAGCCTGTTATGATCATGCTAAACAAATTGTTATTAAAAG TAAAATAGCTGAGGATAACGTTTATGCCCACACATTAGCTTCCATCATGTCAGGTCTCGCAGCAACTTCTTTAAGTTGTC CAGCTGATGTTGTGAAGACTAGAATGATGAATCAGGCAGATAAAAAGGAGGGGAAACTCTTATATAACAGCTCTTATGAT TGCCTGGTAAAGACTGTTAAACTTGAAGGAATAAGAGCACTGTGGAAAGGGTTCTTCCCCACATGGGCAAGGCTTGGCCC ATGGCAATTTGTGTTCTGGGTTTCGTATGAGAAGTTAAGAAAAGTTGCAGGGCTCTCTTCTTTCTAA
CDS sequence (LotjaGi5g1v0256700.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAATCATCAGGCCATCAACATGGTGGAGTTGATAACACTCCCACAAAGCTTGTACTGACATCACTGTCAGCAATGGT AGCTGAGACCACAACTTTCCCCATAGACCTCATCAAGACCAGGCTCCAACTCCACGGCGAGTCGCTTTCCTCGAGTCGTT CTACCGGTGCGTTTCGAATAGGTTTGCACATTGTTCGCGAACAAGGGACCCTTGGCCTTTACAAGGGCCTGTCTCCAGCA ATTGTCAGACACCTACTCTACACGCCTTTTCGGATCGTTGGATATGAGCACCTGAGGAGTGTTGTTTCTGATGATAACGG GTCACTGTTTATCGTTGGCAAGGCTTTTGTTGGTGGAATCTCTGGTAGCTTGGCTCAGATTGTAGCAAGCCCGGCTGATC TTGTCAAGGTGAGGATGCAAGCTGATGGCCGAATGGTGAGCCAAGGTCTTCAACCTCGGTATTCAGGGCTATTTGATGCT TTCAACAAAATTGTTCAAGCTGAAGGGTTACAAGGACTATGGAAGGGTGTTTTTCCTAACATCCAAAGAGCCTTTTTAGT GAATATGGGAGAATTAGCCTGTTATGATCATGCTAAACAAATTGTTATTAAAAGTAAAATAGCTGAGGATAACGTTTATG CCCACACATTAGCTTCCATCATGTCAGGTCTCGCAGCAACTTCTTTAAGTTGTCCAGCTGATGTTGTGAAGACTAGAATG ATGAATCAGGCAGATAAAAAGGAGGGGAAACTCTTATATAACAGCTCTTATGATTGCCTGGTAAAGACTGTTAAACTTGA AGGAATAAGAGCACTGTGGAAAGGGTTCTTCCCCACATGGGCAAGGCTTGGCCCATGGCAATTTGTGTTCTGGGTTTCGT ATGAGAAGTTAAGAAAAGTTGCAGGGCTCTCTTCTTTCTAA
Protein sequence (LotjaGi5g1v0256700.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKSSGHQHGGVDNTPTKLVLTSLSAMVAETTTFPIDLIKTRLQLHGESLSSSRSTGAFRIGLHIVREQGTLGLYKGLSPA IVRHLLYTPFRIVGYEHLRSVVSDDNGSLFIVGKAFVGGISGSLAQIVASPADLVKVRMQADGRMVSQGLQPRYSGLFDA FNKIVQAEGLQGLWKGVFPNIQRAFLVNMGELACYDHAKQIVIKSKIAEDNVYAHTLASIMSGLAATSLSCPADVVKTRM MNQADKKEGKLLYNSSYDCLVKTVKLEGIRALWKGFFPTWARLGPWQFVFWVSYEKLRKVAGLSSF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 12 | 306 | 295 | 1.7E-139 | – | |
| PANTHER | 12 | 306 | 295 | 1.7E-139 | – | |
| Pfam | 15 | 104 | 90 | 6.3E-19 | ||
| Gene3D | 15 | 304 | 290 | 7.2E-89 | ||
| ProSiteProfiles | 16 | 101 | 86 | 21.312 | ||
| PRINTS | 17 | 30 | 14 | 1.2E-6 | ||
| SUPERFAMILY | 17 | 297 | 281 | 3.92E-75 | ||
| PRINTS | 30 | 44 | 15 | 1.2E-6 | ||
| ProSiteProfiles | 109 | 201 | 93 | 27.018 | ||
| Pfam | 111 | 205 | 95 | 1.4E-20 | ||
| PRINTS | 124 | 142 | 19 | 1.2E-6 | ||
| ProSiteProfiles | 210 | 300 | 91 | 26.224 | ||
| Pfam | 211 | 300 | 90 | 3.8E-21 | ||
| PRINTS | 219 | 241 | 23 | 1.2E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP transmembrane transporter activity | Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0256700.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…