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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0257000 |
| Transcript ID | LotjaGi5g1v0257000.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WD-repeat protein, putative; TAIR: AT5G07590.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9P2S5|WRP73_HUMAN WD repeat-containing protein WRAP73; TrEMBL-Plants: tr|A0A0R0HVX5|A0A0R0HVX5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0257000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:56585248..56589677) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGTTCACTGAATCTTACAAGCAAACGGGTCCCTGTTGTTTCTCTCCCAATGCTCGCTTCATTGCCGTCGCCGTCGA TTACCGCCTCGTCATTCGGGAAACCCTCTCCTTCAAGGTCCTTCTTCTTCTTCTTCTTTTATCTTTGTGTGCACCCATTC TTCAAACACTGCTTCAATTCAATTGATTCTTGTAAATATATAAACTTTTATCAGCATTGCATTTAGAGCTCCAATTTTGC TTTCTGGGTCTCGTGGAGTGCACTGTTCAGCGTTTTCGATCCTGCTGTTCCGTGAAAAGATTTTGTGCGTTCAAATTGGG GAAATTGAGCTTTGAATTTCTAGGTCTTTATTGTTTTGAGTAGATTTTAGGTGACCCTACTTGTGATTGGTGTTACTCTG TGTTTTTGGGAATTTAGAGTCTCACATTGGCTAGAGATACGGCCAATAGCAACCCTCAACTCTTGAGCTAGCTTTTGGGT TGAGTTAGGCCTCCCTAATTCTAATATGGTATCAGAGCCTATCTAGATCCATTTGTTGTGGAGACCTCCCATATTTGGGC CACCCACTGATGTTCATTCCACACTCCAGATGTCCAACCCTGGGCGTGAGGGGGTGTGTTAGAGTCTCACTTGATTGGCC TCTAGCCAATGTGGAGGCCAATGTGAGACTCTAACATTCTCTTATGTTTCAATATGCTCTATGTGAATTATATATTACTT TGCTAACCTACAAGTTTTCCATCCGAGTCATTGATTAAGCAAACTCAATACAAAGAAGATGCATCTGGTTCTCGGATTTT AATAATTTCTTTTTAGCTTATGCAGGTTGTACAGTTGTTTTCATGCTTGGACAAGATTAGCTATATTGAATGGGCACTTG ATTCTGAATACATTCTTTGTGGTCTTTATAAACGGCCAATGATACAAGCTTGGTCACTGGCCCAGCCTGAATGGACATGC AAGATAGATGAAGGTCCGGCTGGTATTGCCTATGCTAGATGGAGTCCAGATAGCCGCCACATTCTCACCACATCCGATTT CCAGTTGCGTTTAACAGTTTGGTCGTTGGTGAACACAGCTTGTGTGCATGTGCAGTTGCCAAAGCATGCTTCCAAGGGAG TTTCTTTCACACGTGATGGAAAATTTGCAGCAATTTGCACTAGGCGGGATTGTAAGGACTATATAAATCTGGTATCTTGT CATACATGGGAAATCATGGGCCTTTTTGCAGTTGATACTCTAGACTTGGCTGATATTGAATGGTCACCTGACGATAGTGC TATAGTGATATGGGATTCACCACTTGAATACAAGGTACAGCCCATCATGTCTATTTGCCTTTTCTGTAAATCCTTAACCT CTGAAATTTGGTAATTTAGGTTTTATCAAGTACTTTCAATTAAGTAAAAAAACTGATTTAAAATATTCCATTGAATTTAC TTGGTCTGTGAATTTAACAAAACACCAAATTATTACAAACCGACAAACTAGAATTGAAGAGTACTATGGGAGATAGAAAT AAAAAGAATGAATCTATTAGTGGTGAATGAAATTCGAACAGAAAAGGGAGACAATACTCCTCGCATGGGTTTTACCTTAA ACATAGGGCAAGTCCTTTAAACAACTAAGCTACTGCTCTGTTTCCCTAAGCTAACACATGAAGAGGATGTCGATGGGGAC CTAGTATTATATTACAATAAAGAAGGATGAACTCTCCCAATGAAAGAGAAAGGTAATGCAAATCTTTGGGGTCTACATTG CGAAAGGGCCATTACTCTCGCTCAATGACCAGATCCCCTCCCTCTCTTCCCTGCCTATTATTCATAAACAATGTCATGCC CTACCTTCTCGATCTTAAACTAATTAACTGGGTGAGGCTAATACCCTCCCAAAGTTTCACCTTGTCCTCAAGCTGAACTT TAGGATAATATTTTTTACAACCATGATCACACAGCCATCCAGCACTTTCTCTTACCTCTGGACATTCCGTCATCAGCATT ACTTAAATTTCTTGCTCTTGTATATGTATCCATGACTGTTCTTTTTCTTCACACCTGAAGCACAAAACATTTTGACCTTT TCTGGCAAATAAGCTTCTGATAGCATTTGTACAGAATTCATCATTGAGCCTCCTCCTCATTTATCATTTTGCATTAGAGA CCAAAGTCCACTTTTGCATTAAGTTGTTTTCGAAGATGGGTAGCTCGGTTTTGCTGGATCTTTTTTTTTTTTATGAAAAT ATCCTTTTTGTTGTTTTCTGCCCGATTCTTCTCCCTCTATTCATACATTTGCCACTTGATGTATCATCATTGATGTAAGT ACATCTGAACGTAGATAAGATTGAATTTTAGAGCACTAAAATCTCAAATTGGATTTTATTGGTGTTTACAAGCAACATGT AGCCAAATTTTACACATAATTTATGATCAATGTTTCATGCATGTCACATATCAAATTATAAAATCTATCATGCATGTGTT TTTGTGAATGTTATGTGTCACTTACAATCTGTTGCTTTTATATATTCCACTGGTCATGCTATAAATTAATGTCAGCAATA TTTACATTTGTCAAACACTGTCATTTTTGTTTGATATAGGTTCTAATCTATTCTCCAGATGGAAGGTGCCTTTTCAAGTA TCAAGCATACGAATGTGGATTGGGAGTTAAAAGTGTATCGTGGTCTCCTTGTGGTCAGTTTCTGGCAGTGGGTAGTTATG ACCAGATGCTGCGGGTCCTGAATCACCTAACTTGGAAGACATTTGCAGAGTTTATGCACCTATCTACTGTTCGTGGCCCT GGTTATGCTGCTGTTTTCAAAGTATTCCTTTTCTACACTTTTCATGTTGATGATGTTGCAGTTATGAAAGGCTTGCCTTA TTTACATTGTCCCTAAAATTGCAGGAAGTAGATGAGCCACTTCAACTTGATATGTCAGAACTATGTTTGAGCGATGATTT TCCCCAGGGAAATGATGGTGAGCATAATGGTTATGGGAACAAGCTCTCTCTCTCATTTTCCTTTTTTATTTGTTTAGTTT TACTTATTTTACTTGCTCCAAGCAGATTCTCCGGAGGAACCCTTTAGAGTCAGGTATGAGGTAACTGAAATCCCTATCAA TTTACCGTTCCAGAAGCCTCCTGCTGAGAAACCTAACCCCAAACAAGGAATTGGTAAGCTATGCTCCTCTAAATTTTGAA TGCCATGAGTTATGCGCTTTCTTGTTGCTCAGTTTAATGATCACATAGATAGAAGAAAAAAGACCAGGATTCTTATTTTC ATGATAAGTGCAGTAAATAGGAAGAAATGGTATTATTTGATAGGTATGATTTTCTGATTTACTTAATCTTTGGGTTGACT ACAAGCATGAAAGAGAACCATTACAAAAAGGACAAAAATGTACTAGTGATTCCCTTCCTAAGGATAGAGCAGGATACAAA GTACAAACTGCTCAAGTAACTGGTAGTATGGAAATGCAACCTTTCATGTTTTAGTGCATACCTTACAATCTACATTGGTG ATTGTTAGTATCACGTCGTCATAATATTATTCAGTTTCTCTCTACTCTCTTTTCCTCCTTGGTGTCAAGGCAGTGCCATC CACTATTCAGTTTTATATTCGTCCATCTCAGAAGTTTAAACTAGAAACTATTTATCATTATGTTCTTTTTGGATTTTCTC CCTCTGTAGTTCTGCATACTCTGTTGATGTTACTTTGGTTTCTGCAATATCACTTTGATGGTTGTGTAGTTTCTTATTAA TTGTAATTTGCCTGAGTAGACTAAGTGTGTGTGTTTGGATACTGGTTGAATGCAACATGAAAATACTTTCATCTCAATTC ATAAGGAGAGTTCCAGTCACTTTTTTTTTATCTCGAAGTGAGTGTTAATGAGTGATGAGTGTTAACGTCCATTTCCTGTG GTGCCAACAGTATCCATATATAGCCTGAACCATCTGATTGTCTCTGGACTAACTGATTGTCTTTTGTGACAAGTTTTTGC ATGATGGCTCTTGGAAGATACTACATTAAGATCCCACATGACTAAACTCAATTTTATTGCAGGTATTCTGTCATGGAGCA GTGATAGCCAATATATATGCACTCGAAATGATAGCATGCCTACAGTGCTTTGGATATGGGATGTTCGACATCTTGAGGTT GCTGCAATCTTAGTGCAGAAGGACCCTATCAGAGCAGCAGCATGGGATCCAACATCTGCTCGCCTTGTTCTTTGCACCGG GAGCACCCACTTGTATATGTGGACCCCTTCTGGCGCCTATTGTGTTCATGTTCCTCTGCCGCAATTTAATATAACAGACC TGAAATGGAATTCTGATGGCAGTTGTCTACTCCTTAAGGACAAGGAGTCATTCTGTTGTGCTGCTGTGCCCTTATTGCCA GAATCAAGTGAATACAGCTCAGATGAGTGA
CDS sequence (LotjaGi5g1v0257000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTTCACTGAATCTTACAAGCAAACGGGTCCCTGTTGTTTCTCTCCCAATGCTCGCTTCATTGCCGTCGCCGTCGA TTACCGCCTCGTCATTCGGGAAACCCTCTCCTTCAAGGTTGTACAGTTGTTTTCATGCTTGGACAAGATTAGCTATATTG AATGGGCACTTGATTCTGAATACATTCTTTGTGGTCTTTATAAACGGCCAATGATACAAGCTTGGTCACTGGCCCAGCCT GAATGGACATGCAAGATAGATGAAGGTCCGGCTGGTATTGCCTATGCTAGATGGAGTCCAGATAGCCGCCACATTCTCAC CACATCCGATTTCCAGTTGCGTTTAACAGTTTGGTCGTTGGTGAACACAGCTTGTGTGCATGTGCAGTTGCCAAAGCATG CTTCCAAGGGAGTTTCTTTCACACGTGATGGAAAATTTGCAGCAATTTGCACTAGGCGGGATTGTAAGGACTATATAAAT CTGGTATCTTGTCATACATGGGAAATCATGGGCCTTTTTGCAGTTGATACTCTAGACTTGGCTGATATTGAATGGTCACC TGACGATAGTGCTATAGTGATATGGGATTCACCACTTGAATACAAGGTTCTAATCTATTCTCCAGATGGAAGGTGCCTTT TCAAGTATCAAGCATACGAATGTGGATTGGGAGTTAAAAGTGTATCGTGGTCTCCTTGTGGTCAGTTTCTGGCAGTGGGT AGTTATGACCAGATGCTGCGGGTCCTGAATCACCTAACTTGGAAGACATTTGCAGAGTTTATGCACCTATCTACTGTTCG TGGCCCTGGTTATGCTGCTGTTTTCAAAGAAGTAGATGAGCCACTTCAACTTGATATGTCAGAACTATGTTTGAGCGATG ATTTTCCCCAGGGAAATGATGGTATTCTGTCATGGAGCAGTGATAGCCAATATATATGCACTCGAAATGATAGCATGCCT ACAGTGCTTTGGATATGGGATGTTCGACATCTTGAGGTTGCTGCAATCTTAGTGCAGAAGGACCCTATCAGAGCAGCAGC ATGGGATCCAACATCTGCTCGCCTTGTTCTTTGCACCGGGAGCACCCACTTGTATATGTGGACCCCTTCTGGCGCCTATT GTGTTCATGTTCCTCTGCCGCAATTTAATATAACAGACCTGAAATGGAATTCTGATGGCAGTTGTCTACTCCTTAAGGAC AAGGAGTCATTCTGTTGTGCTGCTGTGCCCTTATTGCCAGAATCAAGTGAATACAGCTCAGATGAGTGA
Protein sequence (LotjaGi5g1v0257000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEFTESYKQTGPCCFSPNARFIAVAVDYRLVIRETLSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRPMIQAWSLAQP EWTCKIDEGPAGIAYARWSPDSRHILTTSDFQLRLTVWSLVNTACVHVQLPKHASKGVSFTRDGKFAAICTRRDCKDYIN LVSCHTWEIMGLFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLFKYQAYECGLGVKSVSWSPCGQFLAVG SYDQMLRVLNHLTWKTFAEFMHLSTVRGPGYAAVFKEVDEPLQLDMSELCLSDDFPQGNDGILSWSSDSQYICTRNDSMP TVLWIWDVRHLEVAAILVQKDPIRAAAWDPTSARLVLCTGSTHLYMWTPSGAYCVHVPLPQFNITDLKWNSDGSCLLLKD KESFCCAAVPLLPESSEYSSDE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 410 | 410 | 7.7E-188 | – | |
| Gene3D | 2 | 273 | 272 | 1.6E-19 | ||
| SUPERFAMILY | 13 | 398 | 386 | 4.32E-34 | – | |
| SMART | 77 | 119 | 43 | 59.0 | ||
| SMART | 209 | 250 | 42 | 0.0028 | ||
| Pfam | 210 | 248 | 39 | 0.0032 | ||
| Gene3D | 298 | 407 | 110 | 2.4E-8 | ||
| SMART | 330 | 368 | 39 | 12.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0257000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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