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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0258300 |
| Transcript ID | LotjaGi5g1v0258300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutathione S-transferase; TAIR: AT2G29420.1 glutathione S-transferase tau 7; Swiss-Prot: sp|Q9FQA3|GST23_MAIZE Glutathione transferase GST 23; TrEMBL-Plants: tr|I3SF61|I3SF61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0258300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:56684049..56685792) extracted from Lotus japonicus Gifu genome v1.2.
CATAATTCACATTCACATTAATAAACAAAGAGAAGATAAAGTTTATTTATTTTGTCTACGCTTAAATTTCCTAGATCGTT TCGATCGAAATGACGTCTTCCACTGACTTGTCTTTGCTGACAAAGTGTATTTTATTTTTCTTTTGGTCAACTGAACTTGC TGAACAAGTTAGATGACTTAATGGATCATTCTATGCCTATAAATAGACTTTGAGCTTAGTGTTGGTTAAGGCAAACACAA GCTAAAATGGCAGATTTGAAAGTCCATGGATTTTGGTATAGTCCTTTTACTTTCAGGGTGCTATGGACCTTAAAGCTAAA GGGTATAGCATTTGAGTACTTTGAGGAAGATCGCTACAACAAGAGTCCTCAACTTCTCCAATACAATCCAGTCCATAAGA AGACTCCAGTGCTTGTTCATGATGGAAAACCCTTATGTGAATCCATGATCATTGTTGAATACATTGATGAGTTATGGCCT CAGAACCCACTGGTTCCTTCTGATCCTTATGAGAAAGCTGTGGCCCGGTTTTGGGTTAGATACGTCGACGACATGGTACA TTTTTTACAAACTTAACATCTTTATGCCTGTTTGGGTCATATATTTTTTTCTCATAATCAATTCTGTCAAGTTTTTTTTA GAATTGATTTTGCATTTATAATCAATTGCATAAGGATTTACGAACATGGTATTAGCTTAATTTAGTTTTCCTTGAATTTA TTTTTCTCAAATCTTTCCATGTTCTAAAATCCTATATATTTGTTAAAGATGTCTCCAGTTTTGCCACAATTCTTCGGTAG ATTTGGTAGTGAAGAACAAGACAAGGTTATAAAGGATATATGGGAACGATTTGAAGTCATTGAAGATCAGTATTTGGGTG ATCACAAGAAATTCCTTGGTGGTGACACTTTGAACATTGTGGACATAACTTTTGGGTCTTTTATGAAAACTCTTGTGGGT ATGCAAGATGCGCTTGAAGTGAAAATCCTGGTAGCTGAGAAATTCCCTCGCTTGCATGCATGGTTTAACAATTTCATGGA TGTTCCTGTTATCAACAACAACCCTGAGCATGAGAAATTGGTGGCTGCTATGAAAGTTTTCAGGGAAAAACTCTCGGCAT CTTCCAGAGAATGATATATAAAGCATTTAGCCATCTCATATACTATGTATTTTGTTTGAGTAATTTCTGAAAGTAATAAA AGTTAAGCCATTAGGATTTAGCTATAGTACTAATTGCTAAGTGGCATTGGTAATTTAAATGAAGTTATGATTTAAACTTT AGTAGTGCATGAACTCTTGCTCTGCACGGTTGTAAAATAATTGTTGGAGATTTATATAATACTCCATCCGTTTCAATATA AGTGAAGATGCATACATATTAAGAAATGTAATTAATTTTGTTAATTTTTTAAAACATATCATTTGTTTCCCTATTTTACC CTTTATAGTGTACTTTTATCTCTCCTCATTTATTATTCTCATAGGGACATTATATGTAAAAACATCAATTAATGCTCTAT TGGAATTTTAAGTGCACGGTTATTGTGAAATAAATGTTTTCTCTCTAAATGAGCAGTTATTATAAAACGGAGAGAGTATT TCTTCACCATCAAATGCAATTATTTTCACCCGAGTCTCTTAATGCTTCGGTGTCTTGTTTGAAATAATGTGATTGAAGAG AGGGTCTTTGTATTGCTGATATAGACTGAGCATCTAAGAGCATCTCCAATGCTAGTTCTTATTT
CDS sequence (LotjaGi5g1v0258300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGATTTGAAAGTCCATGGATTTTGGTATAGTCCTTTTACTTTCAGGGTGCTATGGACCTTAAAGCTAAAGGGTAT AGCATTTGAGTACTTTGAGGAAGATCGCTACAACAAGAGTCCTCAACTTCTCCAATACAATCCAGTCCATAAGAAGACTC CAGTGCTTGTTCATGATGGAAAACCCTTATGTGAATCCATGATCATTGTTGAATACATTGATGAGTTATGGCCTCAGAAC CCACTGGTTCCTTCTGATCCTTATGAGAAAGCTGTGGCCCGGTTTTGGGTTAGATACGTCGACGACATGATGTCTCCAGT TTTGCCACAATTCTTCGGTAGATTTGGTAGTGAAGAACAAGACAAGGTTATAAAGGATATATGGGAACGATTTGAAGTCA TTGAAGATCAGTATTTGGGTGATCACAAGAAATTCCTTGGTGGTGACACTTTGAACATTGTGGACATAACTTTTGGGTCT TTTATGAAAACTCTTGTGGGTATGCAAGATGCGCTTGAAGTGAAAATCCTGGTAGCTGAGAAATTCCCTCGCTTGCATGC ATGGTTTAACAATTTCATGGATGTTCCTGTTATCAACAACAACCCTGAGCATGAGAAATTGGTGGCTGCTATGAAAGTTT TCAGGGAAAAACTCTCGGCATCTTCCAGAGAATGA
Protein sequence (LotjaGi5g1v0258300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADLKVHGFWYSPFTFRVLWTLKLKGIAFEYFEEDRYNKSPQLLQYNPVHKKTPVLVHDGKPLCESMIIVEYIDELWPQN PLVPSDPYEKAVARFWVRYVDDMMSPVLPQFFGRFGSEEQDKVIKDIWERFEVIEDQYLGDHKKFLGGDTLNIVDITFGS FMKTLVGMQDALEVKILVAEKFPRLHAWFNNFMDVPVINNNPEHEKLVAAMKVFREKLSASSRE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SFLD | 1 | 222 | 222 | 0.0 | – | |
| Gene3D | 1 | 82 | 82 | 6.4E-37 | ||
| PANTHER | 1 | 220 | 220 | 5.8E-83 | – | |
| PANTHER | 1 | 220 | 220 | 5.8E-83 | – | |
| SFLD | 1 | 222 | 222 | 0.0 | – | |
| ProSiteProfiles | 2 | 81 | 80 | 22.135 | ||
| PRINTS | 2 | 17 | 16 | 4.0E-5 | ||
| SUPERFAMILY | 3 | 104 | 102 | 4.49E-26 | ||
| Pfam | 3 | 75 | 73 | 3.7E-18 | ||
| CDD | 4 | 77 | 74 | 2.8899E-43 | – | |
| SUPERFAMILY | 75 | 217 | 143 | 1.16E-31 | ||
| PRINTS | 77 | 91 | 15 | 4.0E-5 | ||
| Gene3D | 83 | 223 | 141 | 7.1E-35 | – | |
| ProSiteProfiles | 86 | 214 | 129 | 14.97 | ||
| CDD | 87 | 214 | 128 | 1.65209E-41 | – | |
| Pfam | 103 | 194 | 92 | 4.1E-7 | ||
| PRINTS | 145 | 164 | 20 | 4.0E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Glutathione transferase activity | Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
Expression pattern of LotjaGi5g1v0258300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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